RNA–Protein interactions for RNA: ENST00000516328.1

RNU6-1338P-201, Transcript of RNA, U6 small nuclear 1338, pseudogene, humanhuman

BASIC

Gene RNU6-1338P, Length 91 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1338P-201ENST00000516328 C9orf62Q8N4C0 152 aa-2.85□□□□□ -2.87
RNU6-1338P-201ENST00000516328 PAPPA2Q9BXP8 1791 aa-2.86□□□□□ -2.87
RNU6-1338P-201ENST00000516328 A0A1W2PRE2 83 aa-2.86□□□□□ -2.87
RNU6-1338P-201ENST00000516328 SYS1-DBNDD2H3BUS1 97 aa-2.86□□□□□ -2.87
RNU6-1338P-201ENST00000516328 SERPINB1P30740 379 aa-2.86□□□□□ -2.87
RNU6-1338P-201ENST00000516328 TMEM78Q5T7P6 136 aa-2.86□□□□□ -2.87
RNU6-1338P-201ENST00000516328 SPANXN1Q5VSR9 72 aa-2.86□□□□□ -2.87
RNU6-1338P-201ENST00000516328 RPL7L1Q6DKI1 246 aaKnown RBP-2.86□□□□□ -2.87
RNU6-1338P-201ENST00000516328 CALML5Q9NZT1 146 aa-2.86□□□□□ -2.87
RNU6-1338P-201ENST00000516328 LINC00312Q9Y6C7 94 aa-2.86□□□□□ -2.87
RNU6-1338P-201ENST00000516328 CSMD1Q96PZ7 3565 aa-2.86□□□□□ -2.87
RNU6-1338P-201ENST00000516328 ACACBO00763 2458 aa-2.87□□□□□ -2.87
RNU6-1338P-201ENST00000516328 POLA1P09884 1462 aaPredicted RBP-2.87□□□□□ -2.87
RNU6-1338P-201ENST00000516328 ERCC6Q03468 1493 aa-2.87□□□□□ -2.87
RNU6-1338P-201ENST00000516328 A6NIN4 97 aa-2.87□□□□□ -2.87
RNU6-1338P-201ENST00000516328 SMIM24O75264 130 aa-2.87□□□□□ -2.87
RNU6-1338P-201ENST00000516328 IFNGP01579 166 aa-2.87□□□□□ -2.87
RNU6-1338P-201ENST00000516328 MRPS25P82663 173 aaKnown RBP-2.87□□□□□ -2.87
RNU6-1338P-201ENST00000516328 DNAH8Q96JB1 4490 aa-2.87□□□□□ -2.87
RNU6-1338P-201ENST00000516328 TRIOO75962 3097 aa-2.87□□□□□ -2.87
RNU6-1338P-201ENST00000516328 PXDNQ92626 1479 aa-2.88□□□□□ -2.87
RNU6-1338P-201ENST00000516328 PPP1R17O96001 155 aa-2.88□□□□□ -2.87
RNU6-1338P-201ENST00000516328 COX8AP10176 69 aa-2.88□□□□□ -2.87
RNU6-1338P-201ENST00000516328 UBE2G1P62253 170 aa-2.88□□□□□ -2.87
RNU6-1338P-201ENST00000516328 COX17Q14061 63 aa-2.88□□□□□ -2.87
RNU6-1338P-201ENST00000516328 BANF2Q9H503 90 aa-2.88□□□□□ -2.87
RNU6-1338P-201ENST00000516328 LSM2Q9Y333 95 aaKnown RBP-2.88□□□□□ -2.87
RNU6-1338P-201ENST00000516328 DNAH5Q8TE73 4624 aa-2.88□□□□□ -2.87
RNU6-1338P-201ENST00000516328 H0YAA0 97 aa-2.89□□□□□ -2.87
RNU6-1338P-201ENST00000516328 PAEPP09466 180 aa-2.89□□□□□ -2.87
RNU6-1338P-201ENST00000516328 STOML2Q9UJZ1 356 aa-2.89□□□□□ -2.87
RNU6-1338P-201ENST00000516328 C5orf42Q9H799 3197 aa-2.89□□□□□ -2.87
RNU6-1338P-201ENST00000516328 DOCK2Q92608 1830 aa-2.89□□□□□ -2.87
RNU6-1338P-201ENST00000516328 ARHGEF12Q9NZN5 1544 aa-2.89□□□□□ -2.87
RNU6-1338P-201ENST00000516328 VSTM2AQ8TAG5 236 aa-2.9□□□□□ -2.87
RNU6-1338P-201ENST00000516328 HMGXB3Q12766 1538 aa-2.9□□□□□ -2.87
RNU6-1338P-201ENST00000516328 CEP290O15078 2479 aa-2.91□□□□□ -2.87
RNU6-1338P-201ENST00000516328 ADAMTS12P58397 1594 aa-2.91□□□□□ -2.87
RNU6-1338P-201ENST00000516328 TULP4Q9NRJ4 1543 aa-2.91□□□□□ -2.88
RNU6-1338P-201ENST00000516328 PTPN23Q9H3S7 1636 aa-2.91□□□□□ -2.88
RNU6-1338P-201ENST00000516328 DNAH17Q9UFH2 4485 aa-2.92□□□□□ -2.88
RNU6-1338P-201ENST00000516328 MT-ND4LP03901 98 aa-2.92□□□□□ -2.88
RNU6-1338P-201ENST00000516328 PIPP12273 146 aaPredicted RBP-2.92□□□□□ -2.88
RNU6-1338P-201ENST00000516328 SPTSSBQ8NFR3 76 aa-2.92□□□□□ -2.88
RNU6-1338P-201ENST00000516328 OVOS2A0A0G2JMS6 1433 aa-2.93□□□□□ -2.88
RNU6-1338P-201ENST00000516328 MYO9AB2RTY4 2548 aa-2.93□□□□□ -2.88
RNU6-1338P-201ENST00000516328 TRBV7-4A0A0J9YYF1 115 aa-2.93□□□□□ -2.88
RNU6-1338P-201ENST00000516328 DPM2O94777 84 aa-2.93□□□□□ -2.88
RNU6-1338P-201ENST00000516328 BOLA2Q9H3K6 86 aa-2.93□□□□□ -2.88
RNU6-1338P-201ENST00000516328 PARVGQ9HBI0 331 aa-2.93□□□□□ -2.88
RNU6-1338P-201ENST00000516328 EIF3AQ14152 1382 aaKnown RBP-2.93□□□□□ -2.88
RNU6-1338P-201ENST00000516328 CPSF4LA6NMK7 179 aaKnown RBP-2.94□□□□□ -2.88
RNU6-1338P-201ENST00000516328 H0YGG7 62 aa-2.94□□□□□ -2.88
RNU6-1338P-201ENST00000516328 TMEM244Q5VVB8 128 aa-2.94□□□□□ -2.88
RNU6-1338P-201ENST00000516328 OR9Q1Q8NGQ5 310 aa-2.94□□□□□ -2.88
RNU6-1338P-201ENST00000516328 MYH6P13533 1939 aa-2.94□□□□□ -2.88
RNU6-1338P-201ENST00000516328 DAPK1P53355 1430 aa-2.94□□□□□ -2.88
RNU6-1338P-201ENST00000516328 TROQ12816 1431 aaPredicted RBP-2.94□□□□□ -2.88
RNU6-1338P-201ENST00000516328 MNS1Q8NEH6 495 aa-2.95□□□□□ -2.88
RNU6-1338P-201ENST00000516328 USMG5Q96IX5 58 aa-2.95□□□□□ -2.88
RNU6-1338P-201ENST00000516328 AMELXQ99217 191 aa-2.95□□□□□ -2.88
RNU6-1338P-201ENST00000516328 HOPXQ9BPY8 73 aaPredicted RBP-2.95□□□□□ -2.88
RNU6-1338P-201ENST00000516328 NAA60Q9H7X0 242 aa-2.95□□□□□ -2.88
RNU6-1338P-201ENST00000516328 SLIT1O75093 1534 aa-2.96□□□□□ -2.88
RNU6-1338P-201ENST00000516328 H3BNG1 76 aa-2.96□□□□□ -2.88
RNU6-1338P-201ENST00000516328 DEFB1P60022 68 aa-2.96□□□□□ -2.88
RNU6-1338P-201ENST00000516328 CCL8P80075 99 aa-2.96□□□□□ -2.88
RNU6-1338P-201ENST00000516328 MIC13Q5XKP0 118 aa-2.96□□□□□ -2.88
RNU6-1338P-201ENST00000516328 PPP1R2P3Q6NXS1 205 aa-2.96□□□□□ -2.88
RNU6-1338P-201ENST00000516328 V9GYH0 126 aa-2.96□□□□□ -2.88
RNU6-1338P-201ENST00000516328 MYOM3Q5VTT5 1437 aa-2.96□□□□□ -2.88
RNU6-1338P-201ENST00000516328 BTAF1O14981 1849 aa-2.96□□□□□ -2.88
RNU6-1338P-201ENST00000516328 LRBAP50851 2863 aa-2.97□□□□□ -2.88
RNU6-1338P-201ENST00000516328 ARHGEF10O15013 1369 aa-2.97□□□□□ -2.88
RNU6-1338P-201ENST00000516328 PATJQ8NI35 1801 aa-2.97□□□□□ -2.88
RNU6-1338P-201ENST00000516328 CBLN1P23435 193 aa-2.97□□□□□ -2.88
RNU6-1338P-201ENST00000516328 Q6AWC8 147 aa-2.97□□□□□ -2.88
RNU6-1338P-201ENST00000516328 OR8I2Q8N0Y5 310 aa-2.97□□□□□ -2.88
RNU6-1338P-201ENST00000516328 MAGOHBQ96A72 148 aaKnown RBP-2.97□□□□□ -2.88
RNU6-1338P-201ENST00000516328 TRBV20-1A0A075B6N2 111 aa-2.98□□□□□ -2.89
RNU6-1338P-201ENST00000516328 K7EP34 96 aa-2.98□□□□□ -2.89
RNU6-1338P-201ENST00000516328 H1FX-AS1Q4G0G2 97 aa-2.98□□□□□ -2.89
RNU6-1338P-201ENST00000516328 RAPGEF6Q8TEU7 1601 aa-2.98□□□□□ -2.89
RNU6-1338P-201ENST00000516328 LINC00959A0A1B0GUT2 108 aa-2.99□□□□□ -2.89
RNU6-1338P-201ENST00000516328 BAGE2Q86Y30 109 aa-2.99□□□□□ -2.89
RNU6-1338P-201ENST00000516328 MRPL40Q9NQ50 206 aaKnown RBP-2.99□□□□□ -2.89
RNU6-1338P-201ENST00000516328 SHANK2Q9UPX8 1470 aa-2.99□□□□□ -2.89
RNU6-1338P-201ENST00000516328 CDK5RAP2Q96SN8 1893 aa-2.99□□□□□ -2.89
RNU6-1338P-201ENST00000516328 SETBP1Q9Y6X0 1596 aa-3□□□□□ -2.89
RNU6-1338P-201ENST00000516328 UQCR11O14957 56 aa-3□□□□□ -2.89
RNU6-1338P-201ENST00000516328 TMEM35BQ8NCS4 154 aa-3□□□□□ -2.89
RNU6-1338P-201ENST00000516328 ATPIF1Q9UII2 106 aa-3□□□□□ -2.89
RNU6-1338P-201ENST00000516328 LENEPQ9Y5L5 61 aa-3□□□□□ -2.89
RNU6-1338P-201ENST00000516328 PDE4DIPQ5VU43 2346 aa-3.01□□□□□ -2.89
RNU6-1338P-201ENST00000516328 F8VRH5 84 aa-3.01□□□□□ -2.89
RNU6-1338P-201ENST00000516328 APOC3P02656 99 aa-3.01□□□□□ -2.89
RNU6-1338P-201ENST00000516328 S100A7L2Q5SY68 101 aa-3.01□□□□□ -2.89
RNU6-1338P-201ENST00000516328 ARPC5O15511 151 aa-3.02□□□□□ -2.89
RNU6-1338P-201ENST00000516328 SIX6O95475 246 aa-3.02□□□□□ -2.89
RNU6-1338P-201ENST00000516328 SAR1AQ9NR31 198 aa-3.02□□□□□ -2.89
Retrieved 100 of 20,778 RNA–protein pairs in 230.9 ms