RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 TVP23BQ9NYZ1 205 aa0.92□□□□□ -2.26
LINC01088-211ENST00000515597 PLAC8Q9NZF1 115 aa0.92□□□□□ -2.26
LINC01088-211ENST00000515597 MRPL36Q9P0J6 103 aaKnown RBP0.92□□□□□ -2.26
LINC01088-211ENST00000515597 GSKIPQ9P0R6 139 aa0.92□□□□□ -2.26
LINC01088-211ENST00000515597 SS18L2Q9UHA2 77 aa0.92□□□□□ -2.26
LINC01088-211ENST00000515597 AK3Q9UIJ7 227 aa0.92□□□□□ -2.26
LINC01088-211ENST00000515597 PKIGQ9Y2B9 76 aa0.92□□□□□ -2.26
LINC01088-211ENST00000515597 LY96Q9Y6Y9 160 aa0.92□□□□□ -2.26
LINC01088-211ENST00000515597 TMEM56-RWDD3S4R434 201 aa0.92□□□□□ -2.26
LINC01088-211ENST00000515597 IGHV3-64A0A075B6Q5 118 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 TRAV9-1A0A075B6T8 112 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 IGKV2-40A0A087WW87 121 aaPredicted RBP0.91□□□□□ -2.26
LINC01088-211ENST00000515597 TRAV2A0A0B4J234 112 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 TRAV26-2A0A0B4J265 109 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 A0A0D9SG52 128 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 FAM236DA0A1B0GTK5 79 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 TMEM269A0A1B0GVZ9 245 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 A0A1B0GW54 56 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 PRORSD1PA6NEY8 169 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 RIIAD1A6NNX1 92 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 A8MTW9 85 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 H3BQF6 201 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 K7EIM0 57 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 M0R2T5 61 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 M0R381 172 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 YPEL1O60688 119 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 GADD45GO95257 159 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 IGKV2D-40P01614 121 aaPredicted RBP0.91□□□□□ -2.26
LINC01088-211ENST00000515597 IGHV3-30P01768 117 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 IGHV3-33P01772 117 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 NBEAP1P0C6P0 100 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 IGHV3-30-5P0DP03 117 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 FAM236CP0DP71 79 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 FGF6P10767 208 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 HLA-DRB4P13762 266 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 S100A4P26447 101 aaKnown RBP0.91□□□□□ -2.26
LINC01088-211ENST00000515597 G6PCP35575 357 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 INSL4Q14641 139 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 SURF2Q15527 256 aaPredicted RBP0.91□□□□□ -2.26
LINC01088-211ENST00000515597 CCDC153Q494R4 210 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 TMEM128Q5BJH2 165 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 SPINK9Q5DT21 86 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 C1orf194Q5T5A4 169 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 CLVS1Q8IUQ0 354 aaPredicted RBP0.91□□□□□ -2.26
LINC01088-211ENST00000515597 OTOSQ8NHW6 89 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 THEM6Q8WUY1 208 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 DNAJC9Q8WXX5 260 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 YPEL2Q96QA6 119 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 PFDN5Q99471 154 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 TAF9BQ9HBM6 251 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 LAMTOR3Q9UHA4 124 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 RABAC1Q9UI14 185 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 OR52A1Q9UKL2 312 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 PAIP2BQ9ULR5 123 aaKnown RBP0.91□□□□□ -2.26
LINC01088-211ENST00000515597 HLA-DRB4X5D2U9 266 aa0.91□□□□□ -2.26
LINC01088-211ENST00000515597 TRBV19A0A075B6N1 114 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 TRAV12-2A0A075B6T6 113 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 TRAV14DV4A0A0A6YYC5 116 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 TRBV7-1A0A0A6YYK4 115 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 BORCS7-ASMTA0A0B4J1R7 106 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 IGLC7A0M8Q6 106 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 INMT-MINDY4F8WBC2 141 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 J3KT08 172 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 M0R2Z0 102 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 COX7A2LO14548 114 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 GEMIN2O14893 280 aaKnown RBP0.9□□□□□ -2.27
LINC01088-211ENST00000515597 SHBGP04278 402 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 SRP19P09132 144 aaKnown RBP0.9□□□□□ -2.27
LINC01088-211ENST00000515597 SAA1P0DJI8 122 aaPredicted RBP0.9□□□□□ -2.27
LINC01088-211ENST00000515597 COX4I1P13073 169 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 HIST1H2BOP23527 126 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 HIST1H2BBP33778 126 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 RPL27AP46776 148 aaKnown RBP0.9□□□□□ -2.27
LINC01088-211ENST00000515597 POLR2JP52435 117 aaKnown RBP0.9□□□□□ -2.27
LINC01088-211ENST00000515597 HIST1H2BDP58876 126 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 TAS2R20P59543 309 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 HIST1H4AP62805 103 aaKnown RBP0.9□□□□□ -2.27
LINC01088-211ENST00000515597 HIST1H2BCP62807 126 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 RPL30P62888 115 aaKnown RBP0.9□□□□□ -2.27
LINC01088-211ENST00000515597 GNG5P63218 68 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 WT1-ASQ06250 92 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 HIST2H2BEQ16778 126 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.9□□□□□ -2.27
LINC01088-211ENST00000515597 TMEM78Q5T7P6 136 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 BCL2L15Q5TBC7 163 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 KRTAP26-1Q6PEX3 210 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 DPPA3Q6W0C5 159 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 OR51A4Q8NGJ6 313 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 RAB2BQ8WUD1 216 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 HIST1H2BHQ93079 126 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 BORCS8Q96FH0 119 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 CGREF1Q99674 301 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 HIST1H2BNQ99877 126 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 HIST1H2BMQ99879 126 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 IMUPQ9GZP8 106 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 WDR61Q9GZS3 305 aaKnown RBP0.9□□□□□ -2.27
LINC01088-211ENST00000515597 TMEM222Q9H0R3 208 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 COPZ2Q9P299 210 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 PRNDQ9UKY0 176 aa0.9□□□□□ -2.27
LINC01088-211ENST00000515597 LAMTOR2Q9Y2Q5 125 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms