RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 HBBP68871 147 aa7.4□□□□□ -1.22
VCAN-212ENST00000515397 DGAT2L7PQ6IED9 249 aa7.4□□□□□ -1.22
VCAN-212ENST00000515397 C15orf56Q8N910 161 aa7.4□□□□□ -1.22
VCAN-212ENST00000515397 LINC00526Q96FQ7 95 aa7.4□□□□□ -1.22
VCAN-212ENST00000515397 CDC42SE2Q9NRR3 84 aa7.4□□□□□ -1.22
VCAN-212ENST00000515397 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.4□□□□□ -1.22
VCAN-212ENST00000515397 LINC00959A0A1B0GUT2 108 aa7.39□□□□□ -1.23
VCAN-212ENST00000515397 A0A1B0GW15 77 aa7.39□□□□□ -1.23
VCAN-212ENST00000515397 CCL25O15444 150 aa7.39□□□□□ -1.23
VCAN-212ENST00000515397 TNFRSF6BO95407 300 aa7.39□□□□□ -1.23
VCAN-212ENST00000515397 NPYP01303 97 aa7.39□□□□□ -1.23
VCAN-212ENST00000515397 FOXI1Q12951 378 aa7.39□□□□□ -1.23
VCAN-212ENST00000515397 CLLU1Q5K131 121 aa7.39□□□□□ -1.23
VCAN-212ENST00000515397 SDIM1Q6ZPB5 146 aa7.39□□□□□ -1.23
VCAN-212ENST00000515397 ZNF664Q8N3J9 261 aa7.39□□□□□ -1.23
VCAN-212ENST00000515397 CLRN3Q8NCR9 226 aa7.39□□□□□ -1.23
VCAN-212ENST00000515397 TCAPO15273 167 aa7.38□□□□□ -1.23
VCAN-212ENST00000515397 PPP1R17O96001 155 aa7.38□□□□□ -1.23
VCAN-212ENST00000515397 CHTF8P0CG12 524 aa7.38□□□□□ -1.23
VCAN-212ENST00000515397 ZNF25P17030 456 aaPredicted RBP7.38□□□□□ -1.23
VCAN-212ENST00000515397 RPL39P62891 51 aaKnown RBP7.38□□□□□ -1.23
VCAN-212ENST00000515397 KIR2DL4Q99706 377 aa7.38□□□□□ -1.23
VCAN-212ENST00000515397 AP5S1Q9NUS5 200 aa7.38□□□□□ -1.23
VCAN-212ENST00000515397 MYCBP2O75592 4640 aa7.37□□□□□ -1.23
VCAN-212ENST00000515397 LINC00862A6NCI5 91 aa7.37□□□□□ -1.23
VCAN-212ENST00000515397 F8W036 122 aa7.37□□□□□ -1.23
VCAN-212ENST00000515397 PPP1R2P9O14990 202 aa7.37□□□□□ -1.23
VCAN-212ENST00000515397 MT-ND4LP03901 98 aa7.37□□□□□ -1.23
VCAN-212ENST00000515397 TMEM136Q6ZRR5 245 aa7.37□□□□□ -1.23
VCAN-212ENST00000515397 MRPL52Q86TS9 123 aaKnown RBP7.37□□□□□ -1.23
VCAN-212ENST00000515397 DPH3Q96FX2 82 aa7.37□□□□□ -1.23
VCAN-212ENST00000515397 OPRPNQ99935 248 aaPredicted RBP7.37□□□□□ -1.23
VCAN-212ENST00000515397 UBE2D4Q9Y2X8 147 aa7.37□□□□□ -1.23
VCAN-212ENST00000515397 DMBT1Q9UGM3 2413 aaPredicted RBP7.37□□□□□ -1.23
VCAN-212ENST00000515397 TRBV24-1A0A075B6N3 115 aa7.36□□□□□ -1.23
VCAN-212ENST00000515397 TRAV13-1A0A0B4J241 112 aa7.36□□□□□ -1.23
VCAN-212ENST00000515397 LOC389332A0A1B0GUA5 103 aa7.36□□□□□ -1.23
VCAN-212ENST00000515397 S100A8P05109 93 aa7.36□□□□□ -1.23
VCAN-212ENST00000515397 ADCYAP1P18509 176 aa7.36□□□□□ -1.23
VCAN-212ENST00000515397 CNBPP62633 177 aaKnown RBP7.36□□□□□ -1.23
VCAN-212ENST00000515397 CFAP161Q6P656 301 aa7.36□□□□□ -1.23
VCAN-212ENST00000515397 Q6ZUT4 128 aa7.36□□□□□ -1.23
VCAN-212ENST00000515397 C20orf78Q9BR46 151 aa7.36□□□□□ -1.23
VCAN-212ENST00000515397 SMIM2Q9BVW6 85 aa7.36□□□□□ -1.23
VCAN-212ENST00000515397 PNRC1Q12796 327 aaPredicted RBP7.35□□□□□ -1.23
VCAN-212ENST00000515397 SS18Q15532 418 aa7.35□□□□□ -1.23
VCAN-212ENST00000515397 ANAPC16Q96DE5 110 aa7.35□□□□□ -1.23
VCAN-212ENST00000515397 PRELID3AQ96N28 172 aa7.35□□□□□ -1.23
VCAN-212ENST00000515397 IGHV3-64A0A075B6Q5 118 aa7.34□□□□□ -1.23
VCAN-212ENST00000515397 TMEM218A2RU14 115 aa7.34□□□□□ -1.23
VCAN-212ENST00000515397 PLA2G1BP04054 148 aaKnown RBP7.34□□□□□ -1.23
VCAN-212ENST00000515397 COX6A2Q02221 97 aa7.34□□□□□ -1.23
VCAN-212ENST00000515397 ATP5L2Q7Z4Y8 100 aa7.34□□□□□ -1.23
VCAN-212ENST00000515397 ORMDL3Q8N138 153 aa7.34□□□□□ -1.23
VCAN-212ENST00000515397 PRSS3P2Q8NHM4 247 aa7.34□□□□□ -1.23
VCAN-212ENST00000515397 FAM104AQ969W3 186 aa7.34□□□□□ -1.23
VCAN-212ENST00000515397 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.33□□□□□ -1.24
VCAN-212ENST00000515397 KRTAP10-4P60372 401 aaPredicted RBP7.33□□□□□ -1.24
VCAN-212ENST00000515397 CD164L2Q6UWJ8 174 aa7.33□□□□□ -1.24
VCAN-212ENST00000515397 C5orf38Q86SI9 138 aa7.33□□□□□ -1.24
VCAN-212ENST00000515397 GVQW2A0A096LPI5 108 aaPredicted RBP7.32□□□□□ -1.24
VCAN-212ENST00000515397 IGKV2-24A0A0C4DH68 120 aa7.32□□□□□ -1.24
VCAN-212ENST00000515397 PPBPP02775 128 aa7.32□□□□□ -1.24
VCAN-212ENST00000515397 RPL32P62910 135 aaKnown RBP7.32□□□□□ -1.24
VCAN-212ENST00000515397 COMMD7Q86VX2 200 aa7.32□□□□□ -1.24
VCAN-212ENST00000515397 A0A087WYN8 130 aa7.31□□□□□ -1.24
VCAN-212ENST00000515397 IGHV1-58A0A0C4DH39 117 aa7.31□□□□□ -1.24
VCAN-212ENST00000515397 C1orf196B1AJZ1 125 aa7.31□□□□□ -1.24
VCAN-212ENST00000515397 MALP21145 153 aa7.31□□□□□ -1.24
VCAN-212ENST00000515397 HERC1Q15751 4861 aa7.31□□□□□ -1.24
VCAN-212ENST00000515397 KIAA1644Q3SXP7 199 aa7.31□□□□□ -1.24
VCAN-212ENST00000515397 TMEM18Q96B42 140 aa7.31□□□□□ -1.24
VCAN-212ENST00000515397 CSDC2Q9Y534 153 aaKnown RBP7.31□□□□□ -1.24
VCAN-212ENST00000515397 PHOX2AO14813 284 aa7.3□□□□□ -1.24
VCAN-212ENST00000515397 RAB5AP20339 215 aa7.3□□□□□ -1.24
VCAN-212ENST00000515397 MAJINQ3KP22 176 aa7.3□□□□□ -1.24
VCAN-212ENST00000515397 ZC2HC1BQ5TFG8 222 aa7.3□□□□□ -1.24
VCAN-212ENST00000515397 UQCC3Q6UW78 93 aa7.3□□□□□ -1.24
VCAN-212ENST00000515397 TIMM21Q9BVV7 248 aa7.3□□□□□ -1.24
VCAN-212ENST00000515397 IGLV4-69A0A075B6H9 119 aa7.29□□□□□ -1.24
VCAN-212ENST00000515397 ZNF561-AS1K7EIQ3 104 aa7.29□□□□□ -1.24
VCAN-212ENST00000515397 COX7A2LO14548 114 aa7.29□□□□□ -1.24
VCAN-212ENST00000515397 HNRNPA3P51991 378 aaKnown RBP7.29□□□□□ -1.24
VCAN-212ENST00000515397 RPL37AP61513 92 aaKnown RBP7.29□□□□□ -1.24
VCAN-212ENST00000515397 CIRBPQ14011 172 aaKnown RBP7.29□□□□□ -1.24
VCAN-212ENST00000515397 SPACA4Q8TDM5 124 aa7.29□□□□□ -1.24
VCAN-212ENST00000515397 LRP1Q07954 4544 aaKnown RBP7.28□□□□□ -1.24
VCAN-212ENST00000515397 A0A096LNI7 61 aa7.28□□□□□ -1.24
VCAN-212ENST00000515397 SYCNQ0VAF6 134 aa7.28□□□□□ -1.24
VCAN-212ENST00000515397 SMAGPQ0VAQ4 97 aa7.28□□□□□ -1.24
VCAN-212ENST00000515397 IMMP2LQ96T52 175 aa7.28□□□□□ -1.24
VCAN-212ENST00000515397 CTDSP1Q9GZU7 261 aa7.28□□□□□ -1.24
VCAN-212ENST00000515397 MAP1LC3AQ9H492 121 aa7.28□□□□□ -1.24
VCAN-212ENST00000515397 A0A0J9YXV3 536 aa7.27□□□□□ -1.25
VCAN-212ENST00000515397 IFITM10A6NMD0 228 aa7.27□□□□□ -1.25
VCAN-212ENST00000515397 J3QL48 77 aa7.27□□□□□ -1.25
VCAN-212ENST00000515397 IFI27P40305 119 aaPredicted RBP7.27□□□□□ -1.25
VCAN-212ENST00000515397 Q6ZRU5 148 aa7.27□□□□□ -1.25
VCAN-212ENST00000515397 Q8N8P6 123 aa7.27□□□□□ -1.25
VCAN-212ENST00000515397 CARD19Q96LW7 228 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms