RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 TRBV25-1A0A075B6N4 114 aa13.69□□□□□ -0.22
SSBP2-218ENST00000514493 SH2D6Q7Z4S9 175 aa13.69□□□□□ -0.22
SSBP2-218ENST00000514493 TMEM243Q9BU79 118 aa13.69□□□□□ -0.22
SSBP2-218ENST00000514493 TIMM21Q9BVV7 248 aa13.69□□□□□ -0.22
SSBP2-218ENST00000514493 A0A096LPF7 62 aa13.68□□□□□ -0.22
SSBP2-218ENST00000514493 CEMP1Q6PRD7 247 aaPredicted RBP13.68□□□□□ -0.22
SSBP2-218ENST00000514493 TRBV6-8A0A0A6YYG3 113 aa13.68□□□□□ -0.22
SSBP2-218ENST00000514493 ZC2HC1BQ5TFG8 222 aa13.68□□□□□ -0.22
SSBP2-218ENST00000514493 SMAGPQ0VAQ4 97 aa13.67□□□□□ -0.22
SSBP2-218ENST00000514493 MRPL52Q86TS9 123 aaKnown RBP13.67□□□□□ -0.22
SSBP2-218ENST00000514493 FAM104AQ969W3 186 aa13.67□□□□□ -0.22
SSBP2-218ENST00000514493 VCX2Q9H322 139 aa13.67□□□□□ -0.22
SSBP2-218ENST00000514493 IGLC3P0DOY3 106 aa13.66□□□□□ -0.22
SSBP2-218ENST00000514493 DDTP30046 118 aa13.66□□□□□ -0.22
SSBP2-218ENST00000514493 AMELXQ99217 191 aa13.66□□□□□ -0.22
SSBP2-218ENST00000514493 H7C423 109 aa13.66□□□□□ -0.22
SSBP2-218ENST00000514493 UBE2L6O14933 153 aa13.66□□□□□ -0.22
SSBP2-218ENST00000514493 FGF6P10767 208 aa13.66□□□□□ -0.22
SSBP2-218ENST00000514493 MRPS36P82909 103 aaKnown RBP13.66□□□□□ -0.22
SSBP2-218ENST00000514493 STPG4Q8N801 248 aa13.66□□□□□ -0.22
SSBP2-218ENST00000514493 CSDC2Q9Y534 153 aaKnown RBP13.66□□□□□ -0.22
SSBP2-218ENST00000514493 IGLV4-69A0A075B6H9 119 aa13.65□□□□□ -0.22
SSBP2-218ENST00000514493 DGAT2L7PQ6IED9 249 aa13.65□□□□□ -0.22
SSBP2-218ENST00000514493 Q6ZUT4 128 aa13.65□□□□□ -0.22
SSBP2-218ENST00000514493 ANKRD39Q53RE8 183 aa13.64□□□□□ -0.23
SSBP2-218ENST00000514493 MIEN1Q9BRT3 115 aa13.64□□□□□ -0.23
SSBP2-218ENST00000514493 UQCR10Q9UDW1 63 aa13.63□□□□□ -0.23
SSBP2-218ENST00000514493 C14orf144Q96I85 54 aa13.63□□□□□ -0.23
SSBP2-218ENST00000514493 C11orf86A6NJI1 115 aa13.61□□□□□ -0.23
SSBP2-218ENST00000514493 RNASE13Q5GAN3 156 aaKnown RBP13.61□□□□□ -0.23
SSBP2-218ENST00000514493 AMMECR1LQ6DCA0 310 aa13.61□□□□□ -0.23
SSBP2-218ENST00000514493 C2orf88Q9BSF0 95 aa13.61□□□□□ -0.23
SSBP2-218ENST00000514493 LINC00587B1AMM8 73 aa13.6□□□□□ -0.23
SSBP2-218ENST00000514493 ZNF25P17030 456 aaPredicted RBP13.6□□□□□ -0.23
SSBP2-218ENST00000514493 TIRAPP58753 221 aa13.6□□□□□ -0.23
SSBP2-218ENST00000514493 NFE4Q86UQ8 179 aa13.6□□□□□ -0.23
SSBP2-218ENST00000514493 C15orf53Q8NAA6 179 aa13.6□□□□□ -0.23
SSBP2-218ENST00000514493 OR5A1Q8NGJ0 315 aa13.6□□□□□ -0.23
SSBP2-218ENST00000514493 CHCHD5Q9BSY4 110 aa13.6□□□□□ -0.23
SSBP2-218ENST00000514493 TMEM101Q96IK0 257 aa13.6□□□□□ -0.23
SSBP2-218ENST00000514493 GAGE6Q13070 117 aa13.59□□□□□ -0.23
SSBP2-218ENST00000514493 LELP1Q5T871 98 aa13.59□□□□□ -0.23
SSBP2-218ENST00000514493 CHAC1Q9BUX1 264 aa13.59□□□□□ -0.23
SSBP2-218ENST00000514493 COX8AP10176 69 aa13.58□□□□□ -0.23
SSBP2-218ENST00000514493 TCTAP57738 103 aa13.58□□□□□ -0.23
SSBP2-218ENST00000514493 DNAH7Q8WXX0 4024 aa13.58□□□□□ -0.24
SSBP2-218ENST00000514493 SLC25A34Q6PIV7 304 aa13.58□□□□□ -0.24
SSBP2-218ENST00000514493 LYPD5Q6UWN5 251 aa13.58□□□□□ -0.24
SSBP2-218ENST00000514493 CDC42SE2Q9NRR3 84 aa13.58□□□□□ -0.24
SSBP2-218ENST00000514493 A0A0J9YXV3 536 aa13.57□□□□□ -0.24
SSBP2-218ENST00000514493 NMUP48645 174 aa13.57□□□□□ -0.24
SSBP2-218ENST00000514493 DYNC2H1Q8NCM8 4307 aaKnown RBP13.55□□□□□ -0.24
SSBP2-218ENST00000514493 IGKV2D-26A0A0A0MRZ7 120 aa13.55□□□□□ -0.24
SSBP2-218ENST00000514493 IGLL5B9A064 214 aa13.55□□□□□ -0.24
SSBP2-218ENST00000514493 UBE2D1P51668 147 aa13.55□□□□□ -0.24
SSBP2-218ENST00000514493 TMEM170BQ5T4T1 132 aa13.55□□□□□ -0.24
SSBP2-218ENST00000514493 HNRNPA3P51991 378 aaKnown RBP13.54□□□□□ -0.24
SSBP2-218ENST00000514493 HERVK_113P61574 105 aa13.54□□□□□ -0.24
SSBP2-218ENST00000514493 TINCRA0A1B0GVN0 87 aa13.53□□□□□ -0.24
SSBP2-218ENST00000514493 ZNF22P17026 224 aaPredicted RBP13.53□□□□□ -0.24
SSBP2-218ENST00000514493 TP73-AS1Q9UF72 201 aa13.53□□□□□ -0.24
SSBP2-218ENST00000514493 E9PLD3 99 aa13.53□□□□□ -0.24
SSBP2-218ENST00000514493 BOD1L2Q8IYS8 172 aa13.53□□□□□ -0.24
SSBP2-218ENST00000514493 IGLV4-60A0A075B6I1 120 aa13.52□□□□□ -0.25
SSBP2-218ENST00000514493 A0A1B0GUV1 79 aa13.52□□□□□ -0.25
SSBP2-218ENST00000514493 ESRGQ1W209 222 aa13.52□□□□□ -0.25
SSBP2-218ENST00000514493 PCP2Q8IVA1 136 aa13.52□□□□□ -0.25
SSBP2-218ENST00000514493 DLEU1O43261 78 aa13.51□□□□□ -0.25
SSBP2-218ENST00000514493 MPV17L2Q567V2 206 aa13.51□□□□□ -0.25
SSBP2-218ENST00000514493 FAM19A3Q7Z5A8 133 aa13.51□□□□□ -0.25
SSBP2-218ENST00000514493 TRAV8-6A0A0B4J262 113 aa13.5□□□□□ -0.25
SSBP2-218ENST00000514493 NUPR2A6NF83 97 aa13.5□□□□□ -0.25
SSBP2-218ENST00000514493 TMEM262E9PQX1 116 aa13.5□□□□□ -0.25
SSBP2-218ENST00000514493 RBX1P62877 108 aa13.5□□□□□ -0.25
SSBP2-218ENST00000514493 SEC11AP67812 179 aa13.5□□□□□ -0.25
SSBP2-218ENST00000514493 GEMIN7Q9H840 131 aaKnown RBP13.5□□□□□ -0.25
SSBP2-218ENST00000514493 CSMD3Q7Z407 3707 aa13.49□□□□□ -0.25
SSBP2-218ENST00000514493 TRAV13-1A0A0B4J241 112 aa13.49□□□□□ -0.25
SSBP2-218ENST00000514493 TMEM223A0PJW6 202 aa13.49□□□□□ -0.25
SSBP2-218ENST00000514493 MRPS16Q9Y3D3 137 aaKnown RBP13.48□□□□□ -0.25
SSBP2-218ENST00000514493 IGLV5-45A0A087WSX0 123 aa13.48□□□□□ -0.25
SSBP2-218ENST00000514493 HERVK_113P63121 156 aa13.48□□□□□ -0.25
SSBP2-218ENST00000514493 LINC00242Q5T6M2 205 aa13.48□□□□□ -0.25
SSBP2-218ENST00000514493 LINC00469Q8N7U9 141 aa13.48□□□□□ -0.25
SSBP2-218ENST00000514493 TTTY13Q9BZ97 58 aa13.48□□□□□ -0.25
SSBP2-218ENST00000514493 CTAG1AP78358 180 aa13.47□□□□□ -0.25
SSBP2-218ENST00000514493 WFDC10BQ8IUB3 73 aa13.46□□□□□ -0.25
SSBP2-218ENST00000514493 KLK5Q9Y337 293 aaPredicted RBP13.46□□□□□ -0.25
SSBP2-218ENST00000514493 C2orf91Q6ZV80 131 aa13.45□□□□□ -0.26
SSBP2-218ENST00000514493 Q8N3U1 123 aa13.45□□□□□ -0.26
SSBP2-218ENST00000514493 APLNQ9ULZ1 77 aa13.45□□□□□ -0.26
SSBP2-218ENST00000514493 SIVA1O15304 175 aa13.44□□□□□ -0.26
SSBP2-218ENST00000514493 CDKN2A-AS1Q9UH64 79 aa13.44□□□□□ -0.26
SSBP2-218ENST00000514493 LINC00588Q9Y4M8 146 aa13.44□□□□□ -0.26
SSBP2-218ENST00000514493 H3BRM9 83 aa13.43□□□□□ -0.26
SSBP2-218ENST00000514493 CCL18P55774 89 aa13.43□□□□□ -0.26
SSBP2-218ENST00000514493 COX6A2Q02221 97 aa13.43□□□□□ -0.26
SSBP2-218ENST00000514493 IGKV3OR2-268A0A0C4DH90 116 aa13.43□□□□□ -0.26
SSBP2-218ENST00000514493 LEPROTO15243 131 aa13.43□□□□□ -0.26
SSBP2-218ENST00000514493 MAPKAPK5-AS1Q8N8E1 139 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms