RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 NEXN-AS1Q8NBZ9 246 aa5.77□□□□□ -1.49
CCL28-204ENST00000514421 TMEM141Q96I45 108 aa5.77□□□□□ -1.49
CCL28-204ENST00000514421 TIMM17AQ99595 171 aa5.77□□□□□ -1.49
CCL28-204ENST00000514421 C2orf88Q9BSF0 95 aa5.77□□□□□ -1.49
CCL28-204ENST00000514421 CYSLTR1Q9Y271 337 aa5.77□□□□□ -1.49
CCL28-204ENST00000514421 A0A096LPF7 62 aa5.76□□□□□ -1.49
CCL28-204ENST00000514421 COX8AP10176 69 aa5.76□□□□□ -1.49
CCL28-204ENST00000514421 PLNP26678 52 aa5.76□□□□□ -1.49
CCL28-204ENST00000514421 ESRGQ1W209 222 aa5.76□□□□□ -1.49
CCL28-204ENST00000514421 Q6ZSN1 163 aa5.76□□□□□ -1.49
CCL28-204ENST00000514421 SCGB3A1Q96QR1 104 aa5.76□□□□□ -1.49
CCL28-204ENST00000514421 PMCHL2Q9BQD1 86 aa5.76□□□□□ -1.49
CCL28-204ENST00000514421 PYGO1Q9Y3Y4 419 aa5.76□□□□□ -1.49
CCL28-204ENST00000514421 LINC00588Q9Y4M8 146 aa5.76□□□□□ -1.49
CCL28-204ENST00000514421 ICOSQ9Y6W8 199 aa5.76□□□□□ -1.49
CCL28-204ENST00000514421 DNAH10Q8IVF4 4471 aa5.76□□□□□ -1.49
CCL28-204ENST00000514421 TRBV10-1A0A0K0K1A3 114 aa5.75□□□□□ -1.49
CCL28-204ENST00000514421 F8VRH5 84 aa5.75□□□□□ -1.49
CCL28-204ENST00000514421 M0R143 59 aa5.75□□□□□ -1.49
CCL28-204ENST00000514421 DPM2O94777 84 aa5.75□□□□□ -1.49
CCL28-204ENST00000514421 IGKCP01834 107 aa5.75□□□□□ -1.49
CCL28-204ENST00000514421 PRSS1P07477 247 aa5.75□□□□□ -1.49
CCL28-204ENST00000514421 FGF6P10767 208 aa5.75□□□□□ -1.49
CCL28-204ENST00000514421 SLC25A34Q6PIV7 304 aa5.75□□□□□ -1.49
CCL28-204ENST00000514421 BOD1L2Q8IYS8 172 aa5.75□□□□□ -1.49
CCL28-204ENST00000514421 C20orf203Q8NBC4 194 aa5.75□□□□□ -1.49
CCL28-204ENST00000514421 BAALCQ8WXS3 180 aa5.75□□□□□ -1.49
CCL28-204ENST00000514421 SNHG12Q9BXW3 62 aa5.75□□□□□ -1.49
CCL28-204ENST00000514421 IGHV3-73A0A0B4J1V6 119 aa5.74□□□□□ -1.49
CCL28-204ENST00000514421 TRBV6-4A0A1B0GX49 114 aa5.74□□□□□ -1.49
CCL28-204ENST00000514421 H0Y8G0 127 aa5.74□□□□□ -1.49
CCL28-204ENST00000514421 K7EQD1 137 aa5.74□□□□□ -1.49
CCL28-204ENST00000514421 GYPEP15421 78 aa5.74□□□□□ -1.49
CCL28-204ENST00000514421 ANKRD39Q53RE8 183 aa5.74□□□□□ -1.49
CCL28-204ENST00000514421 Q6ZN92 141 aa5.74□□□□□ -1.49
CCL28-204ENST00000514421 NEGR1Q7Z3B1 354 aa5.74□□□□□ -1.49
CCL28-204ENST00000514421 SH2D6Q7Z4S9 175 aa5.74□□□□□ -1.49
CCL28-204ENST00000514421 SLC25A29Q8N8R3 303 aa5.74□□□□□ -1.49
CCL28-204ENST00000514421 PRADC1Q9BSG0 188 aa5.74□□□□□ -1.49
CCL28-204ENST00000514421 Q9H8V8 135 aa5.74□□□□□ -1.49
CCL28-204ENST00000514421 MRPL35Q9NZE8 188 aaKnown RBP5.74□□□□□ -1.49
CCL28-204ENST00000514421 SIVA1O15304 175 aa5.73□□□□□ -1.49
CCL28-204ENST00000514421 HNRNPA3P51991 378 aaKnown RBP5.73□□□□□ -1.49
CCL28-204ENST00000514421 LYPD5Q6UWN5 251 aa5.73□□□□□ -1.49
CCL28-204ENST00000514421 ZNRF2Q8NHG8 242 aa5.73□□□□□ -1.49
CCL28-204ENST00000514421 TNFRSF18Q9Y5U5 241 aa5.73□□□□□ -1.49
CCL28-204ENST00000514421 PRSS29PA6NIE9 313 aa5.72□□□□□ -1.49
CCL28-204ENST00000514421 M0R2N4 97 aa5.72□□□□□ -1.49
CCL28-204ENST00000514421 EREGO14944 169 aa5.72□□□□□ -1.49
CCL28-204ENST00000514421 RPL39P62891 51 aaKnown RBP5.72□□□□□ -1.49
CCL28-204ENST00000514421 PMVKQ15126 192 aa5.72□□□□□ -1.49
CCL28-204ENST00000514421 PAPPA-AS1Q5QFB9 102 aa5.72□□□□□ -1.49
CCL28-204ENST00000514421 C2orf91Q6ZV80 131 aa5.72□□□□□ -1.49
CCL28-204ENST00000514421 LINC00528Q8N1L1 170 aa5.72□□□□□ -1.49
CCL28-204ENST00000514421 STPG4Q8N801 248 aa5.72□□□□□ -1.49
CCL28-204ENST00000514421 FAM104AQ969W3 186 aa5.72□□□□□ -1.49
CCL28-204ENST00000514421 UPK3BQ9BT76 320 aa5.72□□□□□ -1.49
CCL28-204ENST00000514421 CHCHD7Q9BUK0 85 aa5.72□□□□□ -1.49
CCL28-204ENST00000514421 TIMM21Q9BVV7 248 aa5.72□□□□□ -1.49
CCL28-204ENST00000514421 CST9LQ9H4G1 147 aa5.72□□□□□ -1.49
CCL28-204ENST00000514421 Q9UF83 564 aa5.72□□□□□ -1.49
CCL28-204ENST00000514421 CHTOPQ9Y3Y2 248 aaKnown RBP5.72□□□□□ -1.49
CCL28-204ENST00000514421 IGLV4-69A0A075B6H9 119 aa5.71□□□□□ -1.5
CCL28-204ENST00000514421 TRBV7-3A0A075B6L6 115 aa5.71□□□□□ -1.5
CCL28-204ENST00000514421 LOC100131303A0A0U1RQF7 123 aa5.71□□□□□ -1.5
CCL28-204ENST00000514421 NBDYA0A0U1RRE5 68 aa5.71□□□□□ -1.5
CCL28-204ENST00000514421 LINC00694P0DN24 101 aa5.71□□□□□ -1.5
CCL28-204ENST00000514421 TIRAPP58753 221 aa5.71□□□□□ -1.5
CCL28-204ENST00000514421 Q6ZR54 194 aa5.71□□□□□ -1.5
CCL28-204ENST00000514421 DAZ4Q86SG3 579 aaKnown RBP5.71□□□□□ -1.5
CCL28-204ENST00000514421 NFE4Q86UQ8 179 aa5.71□□□□□ -1.5
CCL28-204ENST00000514421 AMELXQ99217 191 aa5.71□□□□□ -1.5
CCL28-204ENST00000514421 DAZ3Q9NR90 486 aaKnown RBP5.71□□□□□ -1.5
CCL28-204ENST00000514421 SPANXA1Q9NS26 97 aa5.71□□□□□ -1.5
CCL28-204ENST00000514421 HIGD1BQ9P298 99 aa5.71□□□□□ -1.5
CCL28-204ENST00000514421 DNAH17Q9UFH2 4485 aa5.7□□□□□ -1.5
CCL28-204ENST00000514421 IGLV4-3A0A075B6K6 122 aa5.7□□□□□ -1.5
CCL28-204ENST00000514421 UBE2D3P61077 147 aa5.7□□□□□ -1.5
CCL28-204ENST00000514421 UBE2D2P62837 147 aa5.7□□□□□ -1.5
CCL28-204ENST00000514421 MRPS36P82909 103 aaKnown RBP5.7□□□□□ -1.5
CCL28-204ENST00000514421 ZC2HC1BQ5TFG8 222 aa5.7□□□□□ -1.5
CCL28-204ENST00000514421 ATP6V0E2Q8NHE4 81 aa5.7□□□□□ -1.5
CCL28-204ENST00000514421 GTSF1LQ9H1H1 148 aa5.7□□□□□ -1.5
CCL28-204ENST00000514421 CSDC2Q9Y534 153 aaKnown RBP5.7□□□□□ -1.5
CCL28-204ENST00000514421 DNAH2Q9P225 4427 aa5.7□□□□□ -1.5
CCL28-204ENST00000514421 IGKV2D-26A0A0A0MRZ7 120 aa5.69□□□□□ -1.5
CCL28-204ENST00000514421 GAGE12JA6NER3 117 aa5.69□□□□□ -1.5
CCL28-204ENST00000514421 E9PLD3 99 aa5.69□□□□□ -1.5
CCL28-204ENST00000514421 RPL36AP83881 106 aaKnown RBP5.69□□□□□ -1.5
CCL28-204ENST00000514421 GAGE1Q13065 139 aa5.69□□□□□ -1.5
CCL28-204ENST00000514421 GAGE4Q13068 117 aa5.69□□□□□ -1.5
CCL28-204ENST00000514421 GAGE5Q13069 117 aa5.69□□□□□ -1.5
CCL28-204ENST00000514421 COTL1Q14019 142 aa5.69□□□□□ -1.5
CCL28-204ENST00000514421 GAGE13Q4V321 117 aa5.69□□□□□ -1.5
CCL28-204ENST00000514421 RPL36ALQ969Q0 106 aaKnown RBP5.69□□□□□ -1.5
CCL28-204ENST00000514421 UBE2D4Q9Y2X8 147 aa5.69□□□□□ -1.5
CCL28-204ENST00000514421 C11orf86A6NJI1 115 aa5.68□□□□□ -1.5
CCL28-204ENST00000514421 TTC32Q5I0X7 151 aa5.68□□□□□ -1.5
CCL28-204ENST00000514421 COL5A1-AS1Q5SY13 56 aa5.68□□□□□ -1.5
CCL28-204ENST00000514421 C1orf134Q5TEV5 83 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms