RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 TRBV27A0A0K0K1C4 114 aa5.47□□□□□ -1.53
NEDD4-210ENST00000513957 PHOX2AO14813 284 aa5.47□□□□□ -1.53
NEDD4-210ENST00000513957 APCSP02743 223 aa5.47□□□□□ -1.53
NEDD4-210ENST00000513957 ANGP03950 147 aaKnown RBP5.47□□□□□ -1.53
NEDD4-210ENST00000513957 ZNF25P17030 456 aaPredicted RBP5.47□□□□□ -1.53
NEDD4-210ENST00000513957 RPL32P62910 135 aaKnown RBP5.47□□□□□ -1.53
NEDD4-210ENST00000513957 ERASQ7Z444 233 aa5.47□□□□□ -1.53
NEDD4-210ENST00000513957 COMMD7Q86VX2 200 aa5.47□□□□□ -1.53
NEDD4-210ENST00000513957 UBE2WQ96B02 151 aa5.47□□□□□ -1.53
NEDD4-210ENST00000513957 RPL39LQ96EH5 51 aaKnown RBP5.47□□□□□ -1.53
NEDD4-210ENST00000513957 BTF3L4Q96K17 158 aa5.47□□□□□ -1.53
NEDD4-210ENST00000513957 C20orf78Q9BR46 151 aa5.47□□□□□ -1.53
NEDD4-210ENST00000513957 TMEM70Q9BUB7 260 aa5.47□□□□□ -1.53
NEDD4-210ENST00000513957 Q9HAA7 133 aa5.47□□□□□ -1.53
NEDD4-210ENST00000513957 PRR34Q9NV39 138 aa5.47□□□□□ -1.53
NEDD4-210ENST00000513957 TMEM242Q9NWH2 141 aa5.47□□□□□ -1.53
NEDD4-210ENST00000513957 KLK12Q9UKR0 248 aa5.47□□□□□ -1.53
NEDD4-210ENST00000513957 BIRC6Q9NR09 4857 aa5.47□□□□□ -1.53
NEDD4-210ENST00000513957 TRBV24-1A0A075B6N3 115 aa5.46□□□□□ -1.54
NEDD4-210ENST00000513957 TRAV8-4A0A0B4J246 113 aa5.46□□□□□ -1.54
NEDD4-210ENST00000513957 C16orf90A8MZG2 172 aa5.46□□□□□ -1.54
NEDD4-210ENST00000513957 ADCYAP1P18509 176 aa5.46□□□□□ -1.54
NEDD4-210ENST00000513957 POLR2KP53803 58 aaKnown RBP5.46□□□□□ -1.54
NEDD4-210ENST00000513957 RBX1P62877 108 aa5.46□□□□□ -1.54
NEDD4-210ENST00000513957 SMAGPQ0VAQ4 97 aa5.46□□□□□ -1.54
NEDD4-210ENST00000513957 C10orf91Q5T1B1 145 aa5.46□□□□□ -1.54
NEDD4-210ENST00000513957 SPATA12Q7Z6I5 190 aa5.46□□□□□ -1.54
NEDD4-210ENST00000513957 KIR2DL4Q99706 377 aa5.46□□□□□ -1.54
NEDD4-210ENST00000513957 LAMTOR2Q9Y2Q5 125 aa5.46□□□□□ -1.54
NEDD4-210ENST00000513957 LRCOL1A6NCL2 159 aa5.45□□□□□ -1.54
NEDD4-210ENST00000513957 PMCHP20382 165 aa5.45□□□□□ -1.54
NEDD4-210ENST00000513957 CKS2P33552 79 aa5.45□□□□□ -1.54
NEDD4-210ENST00000513957 SEC61BP60468 96 aaKnown RBP5.45□□□□□ -1.54
NEDD4-210ENST00000513957 HERV-K104P63124 156 aa5.45□□□□□ -1.54
NEDD4-210ENST00000513957 GAGE6Q13070 117 aa5.45□□□□□ -1.54
NEDD4-210ENST00000513957 RHEBQ15382 184 aa5.45□□□□□ -1.54
NEDD4-210ENST00000513957 MRPL51Q4U2R6 128 aaKnown RBP5.45□□□□□ -1.54
NEDD4-210ENST00000513957 C14orf177Q52M58 125 aa5.45□□□□□ -1.54
NEDD4-210ENST00000513957 MRPL54Q6P161 138 aaKnown RBP5.45□□□□□ -1.54
NEDD4-210ENST00000513957 NRACQ8N912 160 aa5.45□□□□□ -1.54
NEDD4-210ENST00000513957 CARHSP1Q9Y2V2 147 aaKnown RBP5.45□□□□□ -1.54
NEDD4-210ENST00000513957 DNAH11Q96DT5 4516 aa5.45□□□□□ -1.54
NEDD4-210ENST00000513957 IGKV2D-24A0A075B6R9 120 aa5.44□□□□□ -1.54
NEDD4-210ENST00000513957 C7orf77A4D0Y5 90 aa5.44□□□□□ -1.54
NEDD4-210ENST00000513957 CDK2AP2O75956 126 aa5.44□□□□□ -1.54
NEDD4-210ENST00000513957 ESDP10768 282 aa5.44□□□□□ -1.54
NEDD4-210ENST00000513957 S100PP25815 95 aa5.44□□□□□ -1.54
NEDD4-210ENST00000513957 RPS10P46783 165 aaKnown RBP5.44□□□□□ -1.54
NEDD4-210ENST00000513957 REG3AQ06141 175 aa5.44□□□□□ -1.54
NEDD4-210ENST00000513957 ENHOQ6UWT2 76 aa5.44□□□□□ -1.54
NEDD4-210ENST00000513957 Q75L30 129 aa5.44□□□□□ -1.54
NEDD4-210ENST00000513957 ORMDL3Q8N138 153 aa5.44□□□□□ -1.54
NEDD4-210ENST00000513957 Q8N814 137 aa5.44□□□□□ -1.54
NEDD4-210ENST00000513957 Q8N976 141 aa5.44□□□□□ -1.54
NEDD4-210ENST00000513957 TSHBP01222 138 aa5.43□□□□□ -1.54
NEDD4-210ENST00000513957 FCER1GP30273 86 aa5.43□□□□□ -1.54
NEDD4-210ENST00000513957 LINC00310P59036 64 aa5.43□□□□□ -1.54
NEDD4-210ENST00000513957 NDUFA5Q16718 116 aa5.43□□□□□ -1.54
NEDD4-210ENST00000513957 COX19Q49B96 90 aa5.43□□□□□ -1.54
NEDD4-210ENST00000513957 AMMECR1LQ6DCA0 310 aa5.43□□□□□ -1.54
NEDD4-210ENST00000513957 MRPL52Q86TS9 123 aaKnown RBP5.43□□□□□ -1.54
NEDD4-210ENST00000513957 LINC00269Q8N2A0 174 aa5.43□□□□□ -1.54
NEDD4-210ENST00000513957 C20orf203Q8NBC4 194 aa5.43□□□□□ -1.54
NEDD4-210ENST00000513957 TMEM101Q96IK0 257 aa5.43□□□□□ -1.54
NEDD4-210ENST00000513957 CSDC2Q9Y534 153 aaKnown RBP5.43□□□□□ -1.54
NEDD4-210ENST00000513957 D6R8Y8 96 aa5.42□□□□□ -1.54
NEDD4-210ENST00000513957 K7EMI3 77 aa5.42□□□□□ -1.54
NEDD4-210ENST00000513957 GAS8-AS1O95177 125 aa5.42□□□□□ -1.54
NEDD4-210ENST00000513957 FGF6P10767 208 aa5.42□□□□□ -1.54
NEDD4-210ENST00000513957 KRTAP10-2P60368 255 aa5.42□□□□□ -1.54
NEDD4-210ENST00000513957 ALKBH7Q9BT30 221 aaPredicted RBP5.42□□□□□ -1.54
NEDD4-210ENST00000513957 SMIM2Q9BVW6 85 aa5.42□□□□□ -1.54
NEDD4-210ENST00000513957 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.42□□□□□ -1.54
NEDD4-210ENST00000513957 DYNC1H1Q14204 4646 aaKnown RBP5.42□□□□□ -1.54
NEDD4-210ENST00000513957 IGLV4-60A0A075B6I1 120 aa5.41□□□□□ -1.54
NEDD4-210ENST00000513957 IGLV5-52A0A0A0MRZ9 124 aa5.41□□□□□ -1.54
NEDD4-210ENST00000513957 SMKR1H3BMG3 65 aa5.41□□□□□ -1.54
NEDD4-210ENST00000513957 CCL25O15444 150 aa5.41□□□□□ -1.54
NEDD4-210ENST00000513957 HLA-DQA1P01909 254 aa5.41□□□□□ -1.54
NEDD4-210ENST00000513957 TMEM136Q6ZRR5 245 aa5.41□□□□□ -1.54
NEDD4-210ENST00000513957 SVBPQ8N300 66 aa5.41□□□□□ -1.54
NEDD4-210ENST00000513957 OR5A1Q8NGJ0 315 aa5.41□□□□□ -1.54
NEDD4-210ENST00000513957 TIMM21Q9BVV7 248 aa5.41□□□□□ -1.54
NEDD4-210ENST00000513957 KRTAP17-1Q9BYP8 105 aa5.41□□□□□ -1.54
NEDD4-210ENST00000513957 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.4□□□□□ -1.54
NEDD4-210ENST00000513957 IGKV2-29A2NJV5 120 aaPredicted RBP5.4□□□□□ -1.54
NEDD4-210ENST00000513957 SNAPINO95295 136 aa5.4□□□□□ -1.54
NEDD4-210ENST00000513957 MT-ND6P03923 174 aa5.4□□□□□ -1.54
NEDD4-210ENST00000513957 RNASEKQ6P5S7 137 aaKnown RBP5.4□□□□□ -1.54
NEDD4-210ENST00000513957 MAPKAPK5-AS1Q8N8E1 139 aa5.4□□□□□ -1.54
NEDD4-210ENST00000513957 PRELID3AQ96N28 172 aa5.4□□□□□ -1.54
NEDD4-210ENST00000513957 GNB1LQ9BYB4 327 aa5.4□□□□□ -1.54
NEDD4-210ENST00000513957 MAP1LC3AQ9H492 121 aa5.4□□□□□ -1.54
NEDD4-210ENST00000513957 NPYP01303 97 aa5.39□□□□□ -1.55
NEDD4-210ENST00000513957 RAB5AP20339 215 aa5.39□□□□□ -1.55
NEDD4-210ENST00000513957 G0S2P27469 103 aa5.39□□□□□ -1.55
NEDD4-210ENST00000513957 KRTAP26-1Q6PEX3 210 aa5.39□□□□□ -1.55
NEDD4-210ENST00000513957 CLPSL2Q6UWE3 100 aa5.39□□□□□ -1.55
NEDD4-210ENST00000513957 BAALCQ8WXS3 180 aa5.39□□□□□ -1.55
NEDD4-210ENST00000513957 CDC42SE2Q9NRR3 84 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms