RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-211ENST00000513803 LINC00173Q6ZV60 143 aa6.31□□□□□ -1.4
NFKB1-211ENST00000513803 GATD1Q8NB37 220 aa6.31□□□□□ -1.4
NFKB1-211ENST00000513803 MRPL35Q9NZE8 188 aaKnown RBP6.31□□□□□ -1.4
NFKB1-211ENST00000513803 XKRY2A2RUG3 117 aa6.3□□□□□ -1.4
NFKB1-211ENST00000513803 MAP1LC3B2A6NCE7 125 aa6.3□□□□□ -1.4
NFKB1-211ENST00000513803 F8WDY8 70 aa6.3□□□□□ -1.4
NFKB1-211ENST00000513803 TMEM241Q24JQ0 296 aa6.3□□□□□ -1.4
NFKB1-211ENST00000513803 AKR1C8PQ5T2L2 129 aa6.3□□□□□ -1.4
NFKB1-211ENST00000513803 MAP1LC3BQ9GZQ8 125 aa6.3□□□□□ -1.4
NFKB1-211ENST00000513803 SDHAF1A6NFY7 115 aa6.29□□□□□ -1.4
NFKB1-211ENST00000513803 KRTAP9-7A8MTY7 169 aa6.29□□□□□ -1.4
NFKB1-211ENST00000513803 I3L3M4 83 aa6.29□□□□□ -1.4
NFKB1-211ENST00000513803 PAGE4O60829 102 aa6.29□□□□□ -1.4
NFKB1-211ENST00000513803 TLX1NBP0CAT3 122 aa6.29□□□□□ -1.4
NFKB1-211ENST00000513803 PMCHP20382 165 aa6.29□□□□□ -1.4
NFKB1-211ENST00000513803 SPAG11BQ08648 103 aa6.29□□□□□ -1.4
NFKB1-211ENST00000513803 GAGE2EQ4V326 116 aa6.29□□□□□ -1.4
NFKB1-211ENST00000513803 TEX261Q6UWH6 196 aa6.29□□□□□ -1.4
NFKB1-211ENST00000513803 LYZL1Q6UWQ5 148 aa6.29□□□□□ -1.4
NFKB1-211ENST00000513803 TMUB2Q71RG4 321 aa6.29□□□□□ -1.4
NFKB1-211ENST00000513803 MRPL52Q86TS9 123 aaKnown RBP6.29□□□□□ -1.4
NFKB1-211ENST00000513803 MRAP2Q96G30 205 aa6.29□□□□□ -1.4
NFKB1-211ENST00000513803 PPDPFQ9H3Y8 114 aa6.29□□□□□ -1.4
NFKB1-211ENST00000513803 GAGE2DQ9UEU5 116 aa6.29□□□□□ -1.4
NFKB1-211ENST00000513803 BORCS7-ASMTA0A0B4J1R7 106 aa6.28□□□□□ -1.4
NFKB1-211ENST00000513803 TSHBP01222 138 aa6.28□□□□□ -1.4
NFKB1-211ENST00000513803 ASB16-AS1Q495Z4 193 aa6.28□□□□□ -1.4
NFKB1-211ENST00000513803 C5orf38Q86SI9 138 aa6.28□□□□□ -1.4
NFKB1-211ENST00000513803 LINC00337Q8N6G1 96 aa6.28□□□□□ -1.4
NFKB1-211ENST00000513803 LINC00304Q8N9R0 145 aa6.28□□□□□ -1.4
NFKB1-211ENST00000513803 OR10D4PQ8NGN7 298 aa6.28□□□□□ -1.4
NFKB1-211ENST00000513803 RPL39LQ96EH5 51 aaKnown RBP6.28□□□□□ -1.4
NFKB1-211ENST00000513803 FAM210AQ96ND0 272 aa6.28□□□□□ -1.4
NFKB1-211ENST00000513803 ALG5Q9Y673 324 aa6.28□□□□□ -1.4
NFKB1-211ENST00000513803 SCO2A0A1W2PP80 73 aa6.27□□□□□ -1.41
NFKB1-211ENST00000513803 NDUFA1O15239 70 aa6.27□□□□□ -1.41
NFKB1-211ENST00000513803 NUPR1O60356 82 aa6.27□□□□□ -1.41
NFKB1-211ENST00000513803 IFNA1P01562 189 aa6.27□□□□□ -1.41
NFKB1-211ENST00000513803 CTAG1AP78358 180 aa6.27□□□□□ -1.41
NFKB1-211ENST00000513803 TWIST1Q15672 202 aa6.27□□□□□ -1.41
NFKB1-211ENST00000513803 LINC00299Q6ZSB3 139 aa6.27□□□□□ -1.41
NFKB1-211ENST00000513803 KRTAP7-1Q8IUC3 87 aa6.27□□□□□ -1.41
NFKB1-211ENST00000513803 PFDN1O60925 122 aa6.26□□□□□ -1.41
NFKB1-211ENST00000513803 RPL28P46779 137 aaKnown RBP6.26□□□□□ -1.41
NFKB1-211ENST00000513803 RPL7L1Q6DKI1 246 aaKnown RBP6.26□□□□□ -1.41
NFKB1-211ENST00000513803 C9orf62Q8N4C0 152 aa6.26□□□□□ -1.41
NFKB1-211ENST00000513803 SMDT1Q9H4I9 107 aa6.26□□□□□ -1.41
NFKB1-211ENST00000513803 TRAV13-1A0A0B4J241 112 aa6.25□□□□□ -1.41
NFKB1-211ENST00000513803 DEFA1P59665 94 aa6.25□□□□□ -1.41
NFKB1-211ENST00000513803 SMIM15Q7Z3B0 74 aa6.25□□□□□ -1.41
NFKB1-211ENST00000513803 MARVELD1Q9BSK0 173 aa6.25□□□□□ -1.41
NFKB1-211ENST00000513803 CTDSP1Q9GZU7 261 aa6.25□□□□□ -1.41
NFKB1-211ENST00000513803 CFC1BP0CG36 223 aa6.24□□□□□ -1.41
NFKB1-211ENST00000513803 RPL35P42766 123 aaKnown RBP6.24□□□□□ -1.41
NFKB1-211ENST00000513803 SEC61BP60468 96 aaKnown RBP6.24□□□□□ -1.41
NFKB1-211ENST00000513803 SMAGPQ0VAQ4 97 aa6.24□□□□□ -1.41
NFKB1-211ENST00000513803 ORAOV1Q8WV07 137 aa6.24□□□□□ -1.41
NFKB1-211ENST00000513803 CYTL1Q9NRR1 136 aa6.24□□□□□ -1.41
NFKB1-211ENST00000513803 C7orf77A4D0Y5 90 aa6.23□□□□□ -1.41
NFKB1-211ENST00000513803 C10orf25Q5T742 122 aa6.23□□□□□ -1.41
NFKB1-211ENST00000513803 UNQ6190/PRO20217Q6UXQ8 127 aa6.23□□□□□ -1.41
NFKB1-211ENST00000513803 KRTAP4-1Q9BYQ7 146 aa6.23□□□□□ -1.41
NFKB1-211ENST00000513803 TMEM242Q9NWH2 141 aa6.23□□□□□ -1.41
NFKB1-211ENST00000513803 ANAPC11Q9NYG5 84 aa6.23□□□□□ -1.41
NFKB1-211ENST00000513803 C6orf48Q9UBA6 75 aa6.23□□□□□ -1.41
NFKB1-211ENST00000513803 CSDC2Q9Y534 153 aaKnown RBP6.23□□□□□ -1.41
NFKB1-211ENST00000513803 TRBV6-5A0A0K0K1A5 114 aa6.22□□□□□ -1.41
NFKB1-211ENST00000513803 CTRLP40313 264 aa6.22□□□□□ -1.41
NFKB1-211ENST00000513803 KRTAP13-2Q52LG2 175 aa6.22□□□□□ -1.41
NFKB1-211ENST00000513803 LBHQ53QV2 105 aaPredicted RBP6.22□□□□□ -1.41
NFKB1-211ENST00000513803 SFT2D1Q8WV19 159 aa6.22□□□□□ -1.41
NFKB1-211ENST00000513803 CNFNQ9BYD5 112 aa6.22□□□□□ -1.41
NFKB1-211ENST00000513803 ST20Q9HBF5 79 aa6.22□□□□□ -1.41
NFKB1-211ENST00000513803 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.21□□□□□ -1.42
NFKB1-211ENST00000513803 FAM229BQ4G0N7 80 aa6.21□□□□□ -1.42
NFKB1-211ENST00000513803 IGKV2D-26A0A0A0MRZ7 120 aa6.2□□□□□ -1.42
NFKB1-211ENST00000513803 NDUFC2-KCTD14E9PQ53 114 aa6.2□□□□□ -1.42
NFKB1-211ENST00000513803 CENPWQ5EE01 88 aa6.2□□□□□ -1.42
NFKB1-211ENST00000513803 RNASE13Q5GAN3 156 aaKnown RBP6.2□□□□□ -1.42
NFKB1-211ENST00000513803 C9orf129Q5T035 196 aaKnown RBP6.2□□□□□ -1.42
NFKB1-211ENST00000513803 LINC00242Q5T6M2 205 aa6.2□□□□□ -1.42
NFKB1-211ENST00000513803 FP248Q71RG6 208 aaPredicted RBP6.2□□□□□ -1.42
NFKB1-211ENST00000513803 SMIM12Q96EX1 92 aa6.2□□□□□ -1.42
NFKB1-211ENST00000513803 BIN3Q9NQY0 253 aa6.2□□□□□ -1.42
NFKB1-211ENST00000513803 TRBV27A0A0K0K1C4 114 aa6.19□□□□□ -1.42
NFKB1-211ENST00000513803 BCE1O60756 84 aa6.19□□□□□ -1.42
NFKB1-211ENST00000513803 FOXA3P55318 350 aaPredicted RBP6.19□□□□□ -1.42
NFKB1-211ENST00000513803 LCE2CQ5TA81 110 aa6.19□□□□□ -1.42
NFKB1-211ENST00000513803 KCNRGQ8N5I3 272 aa6.19□□□□□ -1.42
NFKB1-211ENST00000513803 MBD3L1Q8WWY6 194 aa6.19□□□□□ -1.42
NFKB1-211ENST00000513803 RNASE7Q9H1E1 156 aaKnown RBP6.19□□□□□ -1.42
NFKB1-211ENST00000513803 C22orf24Q9Y442 160 aa6.19□□□□□ -1.42
NFKB1-211ENST00000513803 TRBV30A0A0K0K1B3 111 aa6.18□□□□□ -1.42
NFKB1-211ENST00000513803 A0A1B0GV50 99 aa6.18□□□□□ -1.42
NFKB1-211ENST00000513803 UPK1BO75841 260 aa6.18□□□□□ -1.42
NFKB1-211ENST00000513803 FCER1GP30273 86 aa6.18□□□□□ -1.42
NFKB1-211ENST00000513803 GNG4P50150 75 aa6.18□□□□□ -1.42
NFKB1-211ENST00000513803 POLR2KP53803 58 aaKnown RBP6.18□□□□□ -1.42
NFKB1-211ENST00000513803 S100ZQ8WXG8 99 aa6.18□□□□□ -1.42
NFKB1-211ENST00000513803 UBE2D4Q9Y2X8 147 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms