RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 MRPL23Q16540 153 aaKnown RBP6.93□□□□□ -1.3
TPM3-221ENST00000513769 NEGR1Q7Z3B1 354 aa6.93□□□□□ -1.3
TPM3-221ENST00000513769 SBSPONQ8IVN8 264 aa6.93□□□□□ -1.3
TPM3-221ENST00000513769 ATP6V0E2Q8NHE4 81 aa6.93□□□□□ -1.3
TPM3-221ENST00000513769 BAALCQ8WXS3 180 aa6.93□□□□□ -1.3
TPM3-221ENST00000513769 TRBV25-1A0A075B6N4 114 aa6.92□□□□□ -1.3
TPM3-221ENST00000513769 TRBV6-8A0A0A6YYG3 113 aa6.92□□□□□ -1.3
TPM3-221ENST00000513769 GAGE12JA6NER3 117 aa6.92□□□□□ -1.3
TPM3-221ENST00000513769 ZNF25P17030 456 aaPredicted RBP6.92□□□□□ -1.3
TPM3-221ENST00000513769 KRTAP10-2P60368 255 aa6.92□□□□□ -1.3
TPM3-221ENST00000513769 GAGE1Q13065 139 aa6.92□□□□□ -1.3
TPM3-221ENST00000513769 GAGE4Q13068 117 aa6.92□□□□□ -1.3
TPM3-221ENST00000513769 GAGE5Q13069 117 aa6.92□□□□□ -1.3
TPM3-221ENST00000513769 C12orf74Q32Q52 190 aa6.92□□□□□ -1.3
TPM3-221ENST00000513769 GAGE13Q4V321 117 aa6.92□□□□□ -1.3
TPM3-221ENST00000513769 DGAT2L7PQ6IED9 249 aa6.92□□□□□ -1.3
TPM3-221ENST00000513769 AMELXQ99217 191 aa6.92□□□□□ -1.3
TPM3-221ENST00000513769 UBE2D4Q9Y2X8 147 aa6.92□□□□□ -1.3
TPM3-221ENST00000513769 CHTOPQ9Y3Y2 248 aaKnown RBP6.92□□□□□ -1.3
TPM3-221ENST00000513769 A0A1B0GUV1 79 aa6.91□□□□□ -1.3
TPM3-221ENST00000513769 NHLRC4P0CG21 123 aaPredicted RBP6.91□□□□□ -1.3
TPM3-221ENST00000513769 GYPEP15421 78 aa6.91□□□□□ -1.3
TPM3-221ENST00000513769 TIRAPP58753 221 aa6.91□□□□□ -1.3
TPM3-221ENST00000513769 RPL39P62891 51 aaKnown RBP6.91□□□□□ -1.3
TPM3-221ENST00000513769 SEC11AP67812 179 aa6.91□□□□□ -1.3
TPM3-221ENST00000513769 SPATA45Q537H7 98 aa6.91□□□□□ -1.3
TPM3-221ENST00000513769 NTM-AS1Q6ZSK4 140 aa6.91□□□□□ -1.3
TPM3-221ENST00000513769 PHLDA1Q8WV24 401 aaPredicted RBP6.91□□□□□ -1.3
TPM3-221ENST00000513769 PMCHL2Q9BQD1 86 aa6.91□□□□□ -1.3
TPM3-221ENST00000513769 MIEN1Q9BRT3 115 aa6.91□□□□□ -1.3
TPM3-221ENST00000513769 TMEM243Q9BU79 118 aa6.91□□□□□ -1.3
TPM3-221ENST00000513769 IGHV3-38A0A0C4DH36 116 aa6.9□□□□□ -1.3
TPM3-221ENST00000513769 F5H768 121 aa6.9□□□□□ -1.3
TPM3-221ENST00000513769 H0Y8G0 127 aa6.9□□□□□ -1.3
TPM3-221ENST00000513769 UBE2L6O14933 153 aa6.9□□□□□ -1.3
TPM3-221ENST00000513769 DEFB4AO15263 64 aa6.9□□□□□ -1.3
TPM3-221ENST00000513769 CCL25O15444 150 aa6.9□□□□□ -1.3
TPM3-221ENST00000513769 NFE4Q86UQ8 179 aa6.9□□□□□ -1.3
TPM3-221ENST00000513769 C11orf45Q8TAV5 145 aa6.9□□□□□ -1.3
TPM3-221ENST00000513769 TMEM101Q96IK0 257 aa6.9□□□□□ -1.3
TPM3-221ENST00000513769 VSIG2Q96IQ7 327 aa6.9□□□□□ -1.3
TPM3-221ENST00000513769 MRPL35Q9NZE8 188 aaKnown RBP6.9□□□□□ -1.3
TPM3-221ENST00000513769 UQCR10Q9UDW1 63 aa6.9□□□□□ -1.3
TPM3-221ENST00000513769 PAM16Q9Y3D7 125 aa6.9□□□□□ -1.3
TPM3-221ENST00000513769 IGLV4-3A0A075B6K6 122 aa6.89□□□□□ -1.31
TPM3-221ENST00000513769 DLEU1O43261 78 aa6.89□□□□□ -1.31
TPM3-221ENST00000513769 PRB2P02812 416 aaPredicted RBP6.89□□□□□ -1.31
TPM3-221ENST00000513769 FAM19A3Q7Z5A8 133 aa6.89□□□□□ -1.31
TPM3-221ENST00000513769 C2orf88Q9BSF0 95 aa6.89□□□□□ -1.31
TPM3-221ENST00000513769 CELA1Q9UNI1 258 aa6.89□□□□□ -1.31
TPM3-221ENST00000513769 SIVA1O15304 175 aa6.88□□□□□ -1.31
TPM3-221ENST00000513769 IGLC3P0DOY3 106 aa6.88□□□□□ -1.31
TPM3-221ENST00000513769 FGF6P10767 208 aa6.88□□□□□ -1.31
TPM3-221ENST00000513769 DDTP30046 118 aa6.88□□□□□ -1.31
TPM3-221ENST00000513769 B9D2Q9BPU9 175 aa6.88□□□□□ -1.31
TPM3-221ENST00000513769 CDC42SE2Q9NRR3 84 aa6.88□□□□□ -1.31
TPM3-221ENST00000513769 ICOSQ9Y6W8 199 aa6.88□□□□□ -1.31
TPM3-221ENST00000513769 PRKDCP78527 4128 aaKnown RBP6.88□□□□□ -1.31
TPM3-221ENST00000513769 A0A0J9YWU9 116 aa6.87□□□□□ -1.31
TPM3-221ENST00000513769 LOC100131303A0A0U1RQF7 123 aa6.87□□□□□ -1.31
TPM3-221ENST00000513769 TINCRA0A1B0GVN0 87 aa6.87□□□□□ -1.31
TPM3-221ENST00000513769 C11orf86A6NJI1 115 aa6.87□□□□□ -1.31
TPM3-221ENST00000513769 AMMECR1LQ6DCA0 310 aa6.87□□□□□ -1.31
TPM3-221ENST00000513769 ATOH7Q8N100 152 aa6.87□□□□□ -1.31
TPM3-221ENST00000513769 OR5A1Q8NGJ0 315 aa6.87□□□□□ -1.31
TPM3-221ENST00000513769 MRAPQ8TCY5 172 aa6.87□□□□□ -1.31
TPM3-221ENST00000513769 FAM104AQ969W3 186 aa6.87□□□□□ -1.31
TPM3-221ENST00000513769 COX8AP10176 69 aa6.86□□□□□ -1.31
TPM3-221ENST00000513769 ZC2HC1BQ5TFG8 222 aa6.86□□□□□ -1.31
TPM3-221ENST00000513769 SLC25A34Q6PIV7 304 aa6.86□□□□□ -1.31
TPM3-221ENST00000513769 MRPS16Q9Y3D3 137 aaKnown RBP6.86□□□□□ -1.31
TPM3-221ENST00000513769 NBEAL2Q6ZNJ1 2754 aa6.86□□□□□ -1.31
TPM3-221ENST00000513769 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.85□□□□□ -1.31
TPM3-221ENST00000513769 TRAV10A0A0B4J240 114 aa6.85□□□□□ -1.31
TPM3-221ENST00000513769 hDV102S1A0JD36 115 aa6.85□□□□□ -1.31
TPM3-221ENST00000513769 IGKV2-29A2NJV5 120 aaPredicted RBP6.85□□□□□ -1.31
TPM3-221ENST00000513769 PCP4L1A6NKN8 68 aa6.85□□□□□ -1.31
TPM3-221ENST00000513769 E9PLD3 99 aa6.85□□□□□ -1.31
TPM3-221ENST00000513769 HERVK_113P61574 105 aa6.85□□□□□ -1.31
TPM3-221ENST00000513769 LELP1Q5T871 98 aa6.85□□□□□ -1.31
TPM3-221ENST00000513769 BOD1L2Q8IYS8 172 aa6.85□□□□□ -1.31
TPM3-221ENST00000513769 STPG4Q8N801 248 aa6.85□□□□□ -1.31
TPM3-221ENST00000513769 DEFB104AQ8WTQ1 72 aa6.85□□□□□ -1.31
TPM3-221ENST00000513769 CHCHD5Q9BSY4 110 aa6.85□□□□□ -1.31
TPM3-221ENST00000513769 PRO1933Q9H354 126 aa6.85□□□□□ -1.31
TPM3-221ENST00000513769 IGLV4-69A0A075B6H9 119 aa6.84□□□□□ -1.31
TPM3-221ENST00000513769 DEFB131BA0A096LNP1 70 aa6.84□□□□□ -1.31
TPM3-221ENST00000513769 A0A096LPF7 62 aa6.84□□□□□ -1.31
TPM3-221ENST00000513769 UBE2D1P51668 147 aa6.84□□□□□ -1.31
TPM3-221ENST00000513769 HERVK_113P63121 156 aa6.84□□□□□ -1.31
TPM3-221ENST00000513769 MAJINQ3KP22 176 aa6.84□□□□□ -1.31
TPM3-221ENST00000513769 LYPD5Q6UWN5 251 aa6.84□□□□□ -1.31
TPM3-221ENST00000513769 C15orf53Q8NAA6 179 aa6.84□□□□□ -1.31
TPM3-221ENST00000513769 OPRPNQ99935 248 aaPredicted RBP6.84□□□□□ -1.31
TPM3-221ENST00000513769 RETNQ9HD89 108 aa6.84□□□□□ -1.31
TPM3-221ENST00000513769 TRAV8-6A0A0B4J262 113 aa6.83□□□□□ -1.32
TPM3-221ENST00000513769 A0A0J9YY99 117 aa6.83□□□□□ -1.32
TPM3-221ENST00000513769 TMEM262E9PQX1 116 aa6.83□□□□□ -1.32
TPM3-221ENST00000513769 LBHQ53QV2 105 aaPredicted RBP6.83□□□□□ -1.32
TPM3-221ENST00000513769 Q6ZTC4 211 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms