RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 C11orf71Q6IPW1 123 aa5.74□□□□□ -1.49
CLCN3-209ENST00000513761 C3orf22Q8N5N4 141 aa5.74□□□□□ -1.49
CLCN3-209ENST00000513761 POM121L12Q8N7R1 296 aa5.74□□□□□ -1.49
CLCN3-209ENST00000513761 C16orf74Q96GX8 76 aa5.74□□□□□ -1.49
CLCN3-209ENST00000513761 SPANXCQ9NY87 97 aa5.73□□□□□ -1.49
CLCN3-209ENST00000513761 C19orf84I3L1E1 186 aa5.73□□□□□ -1.49
CLCN3-209ENST00000513761 CDIP1Q9H305 208 aa5.73□□□□□ -1.49
CLCN3-209ENST00000513761 CDSNQ15517 529 aa5.73□□□□□ -1.49
CLCN3-209ENST00000513761 DEFB105AQ8NG35 78 aa5.73□□□□□ -1.49
CLCN3-209ENST00000513761 PYGO1Q9Y3Y4 419 aa5.72□□□□□ -1.49
CLCN3-209ENST00000513761 NCOR2Q9Y618 2525 aa5.72□□□□□ -1.49
CLCN3-209ENST00000513761 HIVEP3Q5T1R4 2406 aa5.72□□□□□ -1.49
CLCN3-209ENST00000513761 MYO18BQ8IUG5 2567 aa5.72□□□□□ -1.49
CLCN3-209ENST00000513761 JMJD7-PLA2G4BH0Y9G9 81 aa5.72□□□□□ -1.49
CLCN3-209ENST00000513761 C9orf85Q96MD7 179 aa5.72□□□□□ -1.49
CLCN3-209ENST00000513761 NAV2Q8IVL1 2488 aa5.72□□□□□ -1.49
CLCN3-209ENST00000513761 NKAPP1Q8N9T2 125 aa5.72□□□□□ -1.49
CLCN3-209ENST00000513761 TRBV10-1A0A0K0K1A3 114 aa5.71□□□□□ -1.49
CLCN3-209ENST00000513761 DCANP1Q8TF63 244 aa5.71□□□□□ -1.49
CLCN3-209ENST00000513761 C1orf43Q9BWL3 253 aa5.71□□□□□ -1.49
CLCN3-209ENST00000513761 UBE2D4Q9Y2X8 147 aa5.71□□□□□ -1.49
CLCN3-209ENST00000513761 SETD2Q9BYW2 2564 aaPredicted RBP5.71□□□□□ -1.49
CLCN3-209ENST00000513761 C20orf197Q8N268 126 aa5.71□□□□□ -1.5
CLCN3-209ENST00000513761 PRO3102Q9H379 93 aa5.71□□□□□ -1.5
CLCN3-209ENST00000513761 F8WEM9 126 aa5.71□□□□□ -1.5
CLCN3-209ENST00000513761 DEFB4AO15263 64 aa5.71□□□□□ -1.5
CLCN3-209ENST00000513761 ADAMTSL4-AS1Q5T5F5 129 aa5.71□□□□□ -1.5
CLCN3-209ENST00000513761 ABCA2Q9BZC7 2435 aa5.71□□□□□ -1.5
CLCN3-209ENST00000513761 NDUFA7O95182 113 aa5.71□□□□□ -1.5
CLCN3-209ENST00000513761 TIRAPP58753 221 aa5.71□□□□□ -1.5
CLCN3-209ENST00000513761 IGHV4-28A0A0C4DH34 117 aa5.7□□□□□ -1.5
CLCN3-209ENST00000513761 SMCPP49901 116 aaPredicted RBP5.7□□□□□ -1.5
CLCN3-209ENST00000513761 MRPS36P82909 103 aaKnown RBP5.7□□□□□ -1.5
CLCN3-209ENST00000513761 TLN2Q9Y4G6 2542 aa5.7□□□□□ -1.5
CLCN3-209ENST00000513761 TMEM89A2RUT3 159 aa5.7□□□□□ -1.5
CLCN3-209ENST00000513761 TMEM256-PLSCR3K7ERE1 68 aa5.7□□□□□ -1.5
CLCN3-209ENST00000513761 CFAP54Q96N23 3096 aa5.7□□□□□ -1.5
CLCN3-209ENST00000513761 WFDC11Q8NEX6 87 aa5.7□□□□□ -1.5
CLCN3-209ENST00000513761 UPK3BQ9BT76 320 aa5.69□□□□□ -1.5
CLCN3-209ENST00000513761 PRB2P02812 416 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-209ENST00000513761 ENHOQ6UWT2 76 aa5.69□□□□□ -1.5
CLCN3-209ENST00000513761 C4orf3Q8WVX3 66 aa5.69□□□□□ -1.5
CLCN3-209ENST00000513761 TIMM17BO60830 172 aa5.69□□□□□ -1.5
CLCN3-209ENST00000513761 PRO0461Q9UI25 63 aa5.69□□□□□ -1.5
CLCN3-209ENST00000513761 USP9XQ93008 2570 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-209ENST00000513761 LINC00694P0DN24 101 aa5.68□□□□□ -1.5
CLCN3-209ENST00000513761 Q6Q795 121 aa5.68□□□□□ -1.5
CLCN3-209ENST00000513761 PRRC2AP48634 2157 aaKnown RBP5.68□□□□□ -1.5
CLCN3-209ENST00000513761 IMUPQ9GZP8 106 aa5.68□□□□□ -1.5
CLCN3-209ENST00000513761 C18orf65Q6ZTR6 163 aa5.68□□□□□ -1.5
CLCN3-209ENST00000513761 TMEM258P61165 79 aa5.67□□□□□ -1.5
CLCN3-209ENST00000513761 RPL18AQ02543 176 aaKnown RBP5.67□□□□□ -1.5
CLCN3-209ENST00000513761 SPAG11BQ08648 103 aa5.67□□□□□ -1.5
CLCN3-209ENST00000513761 DEFB114Q30KQ6 69 aa5.67□□□□□ -1.5
CLCN3-209ENST00000513761 CITED2Q99967 270 aaPredicted RBP5.67□□□□□ -1.5
CLCN3-209ENST00000513761 USP9YO00507 2555 aaPredicted RBP5.67□□□□□ -1.5
CLCN3-209ENST00000513761 CAMK2N2Q96S95 79 aa5.67□□□□□ -1.5
CLCN3-209ENST00000513761 ANKRD11Q6UB99 2663 aaPredicted RBP5.67□□□□□ -1.5
CLCN3-209ENST00000513761 SCXQ7RTU7 201 aa5.67□□□□□ -1.5
CLCN3-209ENST00000513761 SMIM11BQ8TCY0 68 aa5.67□□□□□ -1.5
CLCN3-209ENST00000513761 LINC01546A6NGU7 62 aa5.67□□□□□ -1.5
CLCN3-209ENST00000513761 APOC4P55056 127 aa5.67□□□□□ -1.5
CLCN3-209ENST00000513761 COL4A2P08572 1712 aa5.67□□□□□ -1.5
CLCN3-209ENST00000513761 LOC100131303A0A0U1RQF7 123 aa5.67□□□□□ -1.5
CLCN3-209ENST00000513761 IGKV2D-24A0A075B6R9 120 aa5.66□□□□□ -1.5
CLCN3-209ENST00000513761 USP17L23D6RBM5 183 aa5.66□□□□□ -1.5
CLCN3-209ENST00000513761 IGLV1-40P01703 118 aa5.66□□□□□ -1.5
CLCN3-209ENST00000513761 COX7CP15954 63 aa5.66□□□□□ -1.5
CLCN3-209ENST00000513761 LINC00269Q8N2A0 174 aa5.66□□□□□ -1.5
CLCN3-209ENST00000513761 WFDC9Q8NEX5 89 aa5.66□□□□□ -1.5
CLCN3-209ENST00000513761 COX6A2Q02221 97 aa5.66□□□□□ -1.5
CLCN3-209ENST00000513761 KLK12Q9UKR0 248 aa5.66□□□□□ -1.5
CLCN3-209ENST00000513761 CHD9Q3L8U1 2897 aa5.66□□□□□ -1.5
CLCN3-209ENST00000513761 NREPQ16612 68 aa5.66□□□□□ -1.5
CLCN3-209ENST00000513761 IBA57-AS1B1ANH7 110 aa5.66□□□□□ -1.5
CLCN3-209ENST00000513761 HIVEP2P31629 2446 aa5.66□□□□□ -1.5
CLCN3-209ENST00000513761 LINC00242Q5T6M2 205 aa5.66□□□□□ -1.5
CLCN3-209ENST00000513761 FAM240AA0A1B0GVK7 77 aa5.65□□□□□ -1.5
CLCN3-209ENST00000513761 DEFB135Q30KP9 77 aa5.65□□□□□ -1.5
CLCN3-209ENST00000513761 DEFB113Q30KQ7 82 aa5.65□□□□□ -1.5
CLCN3-209ENST00000513761 SERP2Q8N6R1 65 aa5.65□□□□□ -1.5
CLCN3-209ENST00000513761 DIRC1Q969H9 104 aa5.65□□□□□ -1.5
CLCN3-209ENST00000513761 CXCL5P42830 114 aa5.65□□□□□ -1.51
CLCN3-209ENST00000513761 A0A087WVE0 104 aa5.64□□□□□ -1.51
CLCN3-209ENST00000513761 M0QXV9 152 aa5.64□□□□□ -1.51
CLCN3-209ENST00000513761 C6orf99Q4VX62 202 aa5.64□□□□□ -1.51
CLCN3-209ENST00000513761 CHCHD7Q9BUK0 85 aa5.64□□□□□ -1.51
CLCN3-209ENST00000513761 KLK5Q9Y337 293 aaPredicted RBP5.64□□□□□ -1.51
CLCN3-209ENST00000513761 FN1P02751 2386 aaKnown RBP5.64□□□□□ -1.51
CLCN3-209ENST00000513761 A0A1W2PPR1 153 aa5.64□□□□□ -1.51
CLCN3-209ENST00000513761 C5orf47Q569G3 176 aa5.64□□□□□ -1.51
CLCN3-209ENST00000513761 TRBV6-8A0A0A6YYG3 113 aa5.64□□□□□ -1.51
CLCN3-209ENST00000513761 PRO0255Q9UI72 69 aa5.64□□□□□ -1.51
CLCN3-209ENST00000513761 KIF25-AS1Q9Y6Z4 181 aa5.64□□□□□ -1.51
CLCN3-209ENST00000513761 FAM236DA0A1B0GTK5 79 aa5.64□□□□□ -1.51
CLCN3-209ENST00000513761 FAM236CP0DP71 79 aa5.64□□□□□ -1.51
CLCN3-209ENST00000513761 AVPP01185 164 aa5.63□□□□□ -1.51
CLCN3-209ENST00000513761 AMELXQ99217 191 aa5.63□□□□□ -1.51
CLCN3-209ENST00000513761 SMIM1B2RUZ4 78 aa5.63□□□□□ -1.51
CLCN3-209ENST00000513761 PSCAO43653 123 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms