RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 TRBV7-3A0A075B6L6 115 aa-0.03□□□□□ -2.41
TRAPPC11-210ENST00000513600 LOC100130705A0A1B0GUX0 176 aa-0.03□□□□□ -2.41
TRAPPC11-210ENST00000513600 EFCAB10A6NFE3 127 aa-0.03□□□□□ -2.41
TRAPPC11-210ENST00000513600 MIF4GDA9UHW6 222 aaKnown RBP-0.03□□□□□ -2.41
TRAPPC11-210ENST00000513600 C10orf142B7Z368 130 aa-0.03□□□□□ -2.41
TRAPPC11-210ENST00000513600 SSSCA1O60232 199 aa-0.03□□□□□ -2.41
TRAPPC11-210ENST00000513600 CFDP00746 253 aaPredicted RBP-0.03□□□□□ -2.41
TRAPPC11-210ENST00000513600 IFNGP01579 166 aa-0.03□□□□□ -2.41
TRAPPC11-210ENST00000513600 AKAIN1P0CW23 69 aa-0.03□□□□□ -2.41
TRAPPC11-210ENST00000513600 S100A3P33764 101 aa-0.03□□□□□ -2.41
TRAPPC11-210ENST00000513600 CATR1Q13166 79 aa-0.03□□□□□ -2.41
TRAPPC11-210ENST00000513600 COX17Q14061 63 aa-0.03□□□□□ -2.41
TRAPPC11-210ENST00000513600 WFDC2Q14508 124 aa-0.03□□□□□ -2.41
TRAPPC11-210ENST00000513600 C5orf38Q86SI9 138 aa-0.03□□□□□ -2.41
TRAPPC11-210ENST00000513600 MGST2Q99735 147 aa-0.03□□□□□ -2.41
TRAPPC11-210ENST00000513600 DYNLRB1Q9NP97 96 aa-0.03□□□□□ -2.41
TRAPPC11-210ENST00000513600 NDUFA4L2Q9NRX3 87 aa-0.03□□□□□ -2.41
TRAPPC11-210ENST00000513600 SPCS1Q9Y6A9 102 aa-0.03□□□□□ -2.41
TRAPPC11-210ENST00000513600 DCHS2Q6V1P9 2916 aa-0.03□□□□□ -2.41
TRAPPC11-210ENST00000513600 BIVM-ERCC5R4GMW8 1640 aa-0.03□□□□□ -2.41
TRAPPC11-210ENST00000513600 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.03□□□□□ -2.42
TRAPPC11-210ENST00000513600 KMT2AQ03164 3969 aa-0.04□□□□□ -2.42
TRAPPC11-210ENST00000513600 CPSF1Q10570 1443 aaKnown RBP-0.04□□□□□ -2.42
TRAPPC11-210ENST00000513600 LRRC37A2A6NM11 1700 aa-0.04□□□□□ -2.42
TRAPPC11-210ENST00000513600 TRAV22A0A0B4J277 110 aa-0.04□□□□□ -2.42
TRAPPC11-210ENST00000513600 F8VRH5 84 aa-0.04□□□□□ -2.42
TRAPPC11-210ENST00000513600 M0R3E3 92 aa-0.04□□□□□ -2.42
TRAPPC11-210ENST00000513600 UQCR11O14957 56 aa-0.04□□□□□ -2.42
TRAPPC11-210ENST00000513600 BCE1O60756 84 aa-0.04□□□□□ -2.42
TRAPPC11-210ENST00000513600 TPPP2P59282 170 aa-0.04□□□□□ -2.42
TRAPPC11-210ENST00000513600 HAMPP81172 84 aa-0.04□□□□□ -2.42
TRAPPC11-210ENST00000513600 TMEM170BQ5T4T1 132 aa-0.04□□□□□ -2.42
TRAPPC11-210ENST00000513600 Q5VSD8 79 aa-0.04□□□□□ -2.42
TRAPPC11-210ENST00000513600 RPL13AP3Q6NVV1 102 aa-0.04□□□□□ -2.42
TRAPPC11-210ENST00000513600 COMMD6Q7Z4G1 85 aa-0.04□□□□□ -2.42
TRAPPC11-210ENST00000513600 BAGE2Q86Y30 109 aa-0.04□□□□□ -2.42
TRAPPC11-210ENST00000513600 Q8IZM0 81 aa-0.04□□□□□ -2.42
TRAPPC11-210ENST00000513600 PP6455Q8WZ26 134 aa-0.04□□□□□ -2.42
TRAPPC11-210ENST00000513600 LINC00472Q9H8W2 130 aa-0.04□□□□□ -2.42
TRAPPC11-210ENST00000513600 MUC12Q9UKN1 5478 aa-0.04□□□□□ -2.42
TRAPPC11-210ENST00000513600 ACANP16112 2415 aa-0.04□□□□□ -2.42
TRAPPC11-210ENST00000513600 EP300Q09472 2414 aaPredicted RBP-0.04□□□□□ -2.42
TRAPPC11-210ENST00000513600 ROCK2O75116 1388 aaKnown RBP-0.05□□□□□ -2.42
TRAPPC11-210ENST00000513600 KTN1Q86UP2 1357 aaKnown RBP-0.05□□□□□ -2.42
TRAPPC11-210ENST00000513600 NHSL1Q5SYE7 1610 aa-0.05□□□□□ -2.42
TRAPPC11-210ENST00000513600 HMCN2Q8NDA2 5059 aa-0.05□□□□□ -2.42
TRAPPC11-210ENST00000513600 STAB1Q9NY15 2570 aa-0.05□□□□□ -2.42
TRAPPC11-210ENST00000513600 LOC285095A0A1B0GVY8 99 aa-0.05□□□□□ -2.42
TRAPPC11-210ENST00000513600 IGLC7A0M8Q6 106 aa-0.05□□□□□ -2.42
TRAPPC11-210ENST00000513600 TNFP01375 233 aa-0.05□□□□□ -2.42
TRAPPC11-210ENST00000513600 APOC3P02656 99 aa-0.05□□□□□ -2.42
TRAPPC11-210ENST00000513600 LINC01558Q9Y6Z2 57 aa-0.05□□□□□ -2.42
TRAPPC11-210ENST00000513600 A2ML1A8K2U0 1454 aa-0.05□□□□□ -2.42
TRAPPC11-210ENST00000513600 SETXQ7Z333 2677 aaKnown RBP-0.06□□□□□ -2.42
TRAPPC11-210ENST00000513600 OOSP1A8MZH6 123 aa-0.06□□□□□ -2.42
TRAPPC11-210ENST00000513600 I3L2K1 104 aa-0.06□□□□□ -2.42
TRAPPC11-210ENST00000513600 HMGN4O00479 90 aa-0.06□□□□□ -2.42
TRAPPC11-210ENST00000513600 DEFB109BQ30KR1 87 aa-0.06□□□□□ -2.42
TRAPPC11-210ENST00000513600 Q6JHZ5 121 aa-0.06□□□□□ -2.42
TRAPPC11-210ENST00000513600 MRPL54Q6P161 138 aaKnown RBP-0.06□□□□□ -2.42
TRAPPC11-210ENST00000513600 MYOZ3Q8TDC0 251 aa-0.06□□□□□ -2.42
TRAPPC11-210ENST00000513600 TSLPQ969D9 159 aa-0.06□□□□□ -2.42
TRAPPC11-210ENST00000513600 TP53AIP1Q9HCN2 124 aa-0.06□□□□□ -2.42
TRAPPC11-210ENST00000513600 DOPEY1Q5JWR5 2465 aa-0.06□□□□□ -2.42
TRAPPC11-210ENST00000513600 LRP6O75581 1613 aa-0.06□□□□□ -2.42
TRAPPC11-210ENST00000513600 SBF2Q86WG5 1849 aa-0.06□□□□□ -2.42
TRAPPC11-210ENST00000513600 ZNF236Q9UL36 1845 aa-0.06□□□□□ -2.42
TRAPPC11-210ENST00000513600 ERCC6L2Q5T890 1561 aa-0.06□□□□□ -2.42
TRAPPC11-210ENST00000513600 ZANQ9Y493 2812 aa-0.07□□□□□ -2.42
TRAPPC11-210ENST00000513600 RIMS1Q86UR5 1692 aaKnown RBP-0.07□□□□□ -2.42
TRAPPC11-210ENST00000513600 MYCBP2O75592 4640 aa-0.07□□□□□ -2.42
TRAPPC11-210ENST00000513600 PSME4Q14997 1843 aa-0.07□□□□□ -2.42
TRAPPC11-210ENST00000513600 UBE2L5PA0A1B0GUS4 154 aa-0.07□□□□□ -2.42
TRAPPC11-210ENST00000513600 DLEU1O43261 78 aa-0.07□□□□□ -2.42
TRAPPC11-210ENST00000513600 UBE2L3P68036 154 aaKnown RBP-0.07□□□□□ -2.42
TRAPPC11-210ENST00000513600 DCDP81605 110 aaKnown RBP-0.07□□□□□ -2.42
TRAPPC11-210ENST00000513600 SARNPP82979 210 aaKnown RBP-0.07□□□□□ -2.42
TRAPPC11-210ENST00000513600 C9orf153Q5TBE3 101 aa-0.07□□□□□ -2.42
TRAPPC11-210ENST00000513600 LINC00474Q9P2X8 69 aa-0.07□□□□□ -2.42
TRAPPC11-210ENST00000513600 IER3IP1Q9Y5U9 82 aa-0.07□□□□□ -2.42
TRAPPC11-210ENST00000513600 LAMC1P11047 1609 aa-0.07□□□□□ -2.42
TRAPPC11-210ENST00000513600 QRICH2Q9H0J4 1663 aa-0.08□□□□□ -2.42
TRAPPC11-210ENST00000513600 SHANK2Q9UPX8 1470 aa-0.08□□□□□ -2.42
TRAPPC11-210ENST00000513600 HIVEP1P15822 2718 aa-0.08□□□□□ -2.42
TRAPPC11-210ENST00000513600 SFT2D2O95562 160 aa-0.08□□□□□ -2.42
TRAPPC11-210ENST00000513600 SPRR1AP35321 89 aa-0.08□□□□□ -2.42
TRAPPC11-210ENST00000513600 ATP5EP56381 51 aaPredicted RBP-0.08□□□□□ -2.42
TRAPPC11-210ENST00000513600 PIGYQ3MUY2 71 aa-0.08□□□□□ -2.42
TRAPPC11-210ENST00000513600 NEBP20929 6669 aa-0.08□□□□□ -2.42
TRAPPC11-210ENST00000513600 SMG6Q86US8 1419 aaKnown RBP-0.08□□□□□ -2.42
TRAPPC11-210ENST00000513600 NF1P21359 2839 aa-0.08□□□□□ -2.42
TRAPPC11-210ENST00000513600 MAP1AP78559 2803 aaPredicted RBP-0.08□□□□□ -2.42
TRAPPC11-210ENST00000513600 KIF21AQ7Z4S6 1674 aa-0.08□□□□□ -2.42
TRAPPC11-210ENST00000513600 LRP2P98164 4655 aa-0.08□□□□□ -2.42
TRAPPC11-210ENST00000513600 TCHHQ07283 1943 aa-0.09□□□□□ -2.42
TRAPPC11-210ENST00000513600 TENM2Q9NT68 2774 aa-0.09□□□□□ -2.42
TRAPPC11-210ENST00000513600 NALCNQ8IZF0 1738 aa-0.09□□□□□ -2.42
TRAPPC11-210ENST00000513600 C10orf71Q711Q0 1435 aa-0.09□□□□□ -2.42
TRAPPC11-210ENST00000513600 TRBV6-1A0A0K0K1D8 114 aa-0.09□□□□□ -2.42
TRAPPC11-210ENST00000513600 A0A1B0GV90 55 aa-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms