RNA–Protein interactions for RNA: ENST00000513228.1

SMN1-208, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2

Gene SMN1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-208ENST00000513228 CPSF1Q10570 1443 aaKnown RBP-0.23□□□□□ -2.45
SMN1-208ENST00000513228 BCL9LQ86UU0 1499 aa-0.23□□□□□ -2.45
SMN1-208ENST00000513228 NEBP20929 6669 aa-0.23□□□□□ -2.45
SMN1-208ENST00000513228 ALMS1Q8TCU4 4167 aa-0.24□□□□□ -2.45
SMN1-208ENST00000513228 ROBO1Q9Y6N7 1651 aa-0.24□□□□□ -2.45
SMN1-208ENST00000513228 MYH7P12883 1935 aa-0.24□□□□□ -2.45
SMN1-208ENST00000513228 TRBV7-3A0A075B6L6 115 aa-0.24□□□□□ -2.45
SMN1-208ENST00000513228 PIGBOS1A0A0B4J2F0 54 aa-0.24□□□□□ -2.45
SMN1-208ENST00000513228 HMGN1P05114 100 aa-0.24□□□□□ -2.45
SMN1-208ENST00000513228 SPRR2DP22532 72 aa-0.24□□□□□ -2.45
SMN1-208ENST00000513228 Q56UQ5 140 aa-0.24□□□□□ -2.45
SMN1-208ENST00000513228 SPANXDQ9BXN6 97 aa-0.24□□□□□ -2.45
SMN1-208ENST00000513228 C10orf71Q711Q0 1435 aa-0.24□□□□□ -2.45
SMN1-208ENST00000513228 CHD9Q3L8U1 2897 aa-0.24□□□□□ -2.45
SMN1-208ENST00000513228 PTPRQQ9UMZ3 2332 aa-0.25□□□□□ -2.45
SMN1-208ENST00000513228 C2CD3Q4AC94 2353 aa-0.25□□□□□ -2.45
SMN1-208ENST00000513228 NCOR1O75376 2440 aa-0.25□□□□□ -2.45
SMN1-208ENST00000513228 FAT2Q9NYQ8 4349 aa-0.25□□□□□ -2.45
SMN1-208ENST00000513228 F8VRH5 84 aa-0.25□□□□□ -2.45
SMN1-208ENST00000513228 CATR1Q13166 79 aa-0.25□□□□□ -2.45
SMN1-208ENST00000513228 COX17Q14061 63 aa-0.25□□□□□ -2.45
SMN1-208ENST00000513228 TMEM170BQ5T4T1 132 aa-0.25□□□□□ -2.45
SMN1-208ENST00000513228 BAGE2Q86Y30 109 aa-0.25□□□□□ -2.45
SMN1-208ENST00000513228 TSC22D3Q99576 134 aa-0.25□□□□□ -2.45
SMN1-208ENST00000513228 MGST2Q99735 147 aa-0.25□□□□□ -2.45
SMN1-208ENST00000513228 LINC00474Q9P2X8 69 aa-0.25□□□□□ -2.45
SMN1-208ENST00000513228 PAPPAQ13219 1627 aa-0.25□□□□□ -2.45
SMN1-208ENST00000513228 LRP2P98164 4655 aa-0.26□□□□□ -2.45
SMN1-208ENST00000513228 TNXBP22105 4242 aa-0.26□□□□□ -2.45
SMN1-208ENST00000513228 AKAP6Q13023 2319 aa-0.26□□□□□ -2.45
SMN1-208ENST00000513228 PI4KAP42356 2102 aa-0.26□□□□□ -2.45
SMN1-208ENST00000513228 SBF2Q86WG5 1849 aa-0.26□□□□□ -2.45
SMN1-208ENST00000513228 ARHGEF5Q12774 1597 aa-0.26□□□□□ -2.45
SMN1-208ENST00000513228 IGLC7A0M8Q6 106 aa-0.26□□□□□ -2.45
SMN1-208ENST00000513228 OOSP1A8MZH6 123 aa-0.26□□□□□ -2.45
SMN1-208ENST00000513228 HMGN4O00479 90 aa-0.26□□□□□ -2.45
SMN1-208ENST00000513228 UQCR11O14957 56 aa-0.26□□□□□ -2.45
SMN1-208ENST00000513228 FGF7P21781 194 aa-0.26□□□□□ -2.45
SMN1-208ENST00000513228 Q6JHZ5 121 aa-0.26□□□□□ -2.45
SMN1-208ENST00000513228 PPP3R2Q96LZ3 170 aa-0.26□□□□□ -2.45
SMN1-208ENST00000513228 DYNLRB1Q9NP97 96 aa-0.26□□□□□ -2.45
SMN1-208ENST00000513228 LINC01558Q9Y6Z2 57 aa-0.26□□□□□ -2.45
SMN1-208ENST00000513228 HERC2O95714 4834 aa-0.26□□□□□ -2.45
SMN1-208ENST00000513228 PSME4Q14997 1843 aa-0.27□□□□□ -2.45
SMN1-208ENST00000513228 MYOM1P52179 1685 aa-0.27□□□□□ -2.45
SMN1-208ENST00000513228 A2ML1A8K2U0 1454 aa-0.27□□□□□ -2.45
SMN1-208ENST00000513228 COMMD6Q7Z4G1 85 aa-0.27□□□□□ -2.45
SMN1-208ENST00000513228 C5orf38Q86SI9 138 aa-0.27□□□□□ -2.45
SMN1-208ENST00000513228 STAB1Q9NY15 2570 aa-0.27□□□□□ -2.45
SMN1-208ENST00000513228 HERC1Q15751 4861 aa-0.28□□□□□ -2.45
SMN1-208ENST00000513228 NAIPQ13075 1403 aa-0.28□□□□□ -2.45
SMN1-208ENST00000513228 PLCE1Q9P212 2302 aa-0.28□□□□□ -2.45
SMN1-208ENST00000513228 TRBV6-1A0A0K0K1D8 114 aa-0.28□□□□□ -2.45
SMN1-208ENST00000513228 APOC2P02655 101 aa-0.28□□□□□ -2.45
SMN1-208ENST00000513228 S100A3P33764 101 aa-0.28□□□□□ -2.45
SMN1-208ENST00000513228 TPPP2P59282 170 aa-0.28□□□□□ -2.45
SMN1-208ENST00000513228 C8orf59Q8N0T1 100 aaPredicted RBP-0.28□□□□□ -2.45
SMN1-208ENST00000513228 C1orf54Q8WWF1 131 aa-0.28□□□□□ -2.45
SMN1-208ENST00000513228 PP6455Q8WZ26 134 aa-0.28□□□□□ -2.45
SMN1-208ENST00000513228 PKDREJQ9NTG1 2253 aa-0.28□□□□□ -2.45
SMN1-208ENST00000513228 DOPEY2Q9Y3R5 2298 aa-0.28□□□□□ -2.45
SMN1-208ENST00000513228 USF3Q68DE3 2245 aa-0.28□□□□□ -2.45
SMN1-208ENST00000513228 CUL7Q14999 1698 aa-0.28□□□□□ -2.45
SMN1-208ENST00000513228 ZNF292O60281 2723 aa-0.29□□□□□ -2.46
SMN1-208ENST00000513228 NSD3Q9BZ95 1437 aa-0.29□□□□□ -2.46
SMN1-208ENST00000513228 ROCK2O75116 1388 aaKnown RBP-0.29□□□□□ -2.46
SMN1-208ENST00000513228 RYR3Q15413 4870 aa-0.29□□□□□ -2.46
SMN1-208ENST00000513228 SRRM2Q9UQ35 2752 aaKnown RBP-0.29□□□□□ -2.46
SMN1-208ENST00000513228 FXYD6-FXYD2A0A087WZ82 144 aa-0.29□□□□□ -2.46
SMN1-208ENST00000513228 SSSCA1O60232 199 aa-0.29□□□□□ -2.46
SMN1-208ENST00000513228 SFT2D2O95562 160 aa-0.29□□□□□ -2.46
SMN1-208ENST00000513228 APOC3P02656 99 aa-0.29□□□□□ -2.46
SMN1-208ENST00000513228 AKAIN1P0CW23 69 aa-0.29□□□□□ -2.46
SMN1-208ENST00000513228 DCDP81605 110 aaKnown RBP-0.29□□□□□ -2.46
SMN1-208ENST00000513228 HYDINQ4G0P3 5121 aa-0.29□□□□□ -2.46
SMN1-208ENST00000513228 NALCNQ8IZF0 1738 aa-0.3□□□□□ -2.46
SMN1-208ENST00000513228 RAPGEF6Q8TEU7 1601 aa-0.3□□□□□ -2.46
SMN1-208ENST00000513228 BSNQ9UPA5 3926 aa-0.3□□□□□ -2.46
SMN1-208ENST00000513228 IFNGP01579 166 aa-0.3□□□□□ -2.46
SMN1-208ENST00000513228 PIGYQ3MUY2 71 aa-0.3□□□□□ -2.46
SMN1-208ENST00000513228 MRPL54Q6P161 138 aaKnown RBP-0.3□□□□□ -2.46
SMN1-208ENST00000513228 MYO7BQ6PIF6 2116 aa-0.3□□□□□ -2.46
SMN1-208ENST00000513228 BTAF1O14981 1849 aa-0.3□□□□□ -2.46
SMN1-208ENST00000513228 SMG6Q86US8 1419 aaKnown RBP-0.3□□□□□ -2.46
SMN1-208ENST00000513228 KDM5AP29375 1690 aaKnown RBP-0.3□□□□□ -2.46
SMN1-208ENST00000513228 HECTD4Q9Y4D8 3996 aa-0.31□□□□□ -2.46
SMN1-208ENST00000513228 UBR4Q5T4S7 5183 aa-0.31□□□□□ -2.46
SMN1-208ENST00000513228 FAT1Q14517 4588 aa-0.31□□□□□ -2.46
SMN1-208ENST00000513228 ARHGEF12Q9NZN5 1544 aa-0.31□□□□□ -2.46
SMN1-208ENST00000513228 LOC285095A0A1B0GVY8 99 aa-0.31□□□□□ -2.46
SMN1-208ENST00000513228 CHKB-CPT1BH3BT56 60 aa-0.31□□□□□ -2.46
SMN1-208ENST00000513228 K7EQZ3 153 aa-0.31□□□□□ -2.46
SMN1-208ENST00000513228 TNFP01375 233 aa-0.31□□□□□ -2.46
SMN1-208ENST00000513228 C9orf153Q5TBE3 101 aa-0.31□□□□□ -2.46
SMN1-208ENST00000513228 RPL13AP3Q6NVV1 102 aa-0.31□□□□□ -2.46
SMN1-208ENST00000513228 MYOZ3Q8TDC0 251 aa-0.31□□□□□ -2.46
SMN1-208ENST00000513228 SPRR4Q96PI1 79 aa-0.31□□□□□ -2.46
SMN1-208ENST00000513228 CDC42SE2Q9NRR3 84 aa-0.31□□□□□ -2.46
SMN1-208ENST00000513228 VWFP04275 2813 aa-0.31□□□□□ -2.46
SMN1-208ENST00000513228 TET3O43151 1660 aa-0.31□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 217.2 ms