RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 EGFEM1PQ0D2K5 195 aa6.54□□□□□ -1.36
VCAN-208ENST00000512590 CHCHD7Q9BUK0 85 aa6.54□□□□□ -1.36
VCAN-208ENST00000512590 DOCK9Q9BZ29 2069 aa6.54□□□□□ -1.36
VCAN-208ENST00000512590 COX17Q14061 63 aa6.54□□□□□ -1.36
VCAN-208ENST00000512590 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.54□□□□□ -1.36
VCAN-208ENST00000512590 DOCK4Q8N1I0 1966 aa6.53□□□□□ -1.36
VCAN-208ENST00000512590 NDUFV3P56181 108 aaKnown RBP6.53□□□□□ -1.36
VCAN-208ENST00000512590 MRPS36P82909 103 aaKnown RBP6.53□□□□□ -1.36
VCAN-208ENST00000512590 TICRRQ7Z2Z1 1910 aa6.53□□□□□ -1.36
VCAN-208ENST00000512590 FHL3Q13643 280 aa6.53□□□□□ -1.36
VCAN-208ENST00000512590 SPRY4Q9C004 299 aa6.53□□□□□ -1.36
VCAN-208ENST00000512590 CDKN2A-AS1Q9UH64 79 aa6.53□□□□□ -1.36
VCAN-208ENST00000512590 CACNA1IQ9P0X4 2223 aa6.53□□□□□ -1.36
VCAN-208ENST00000512590 ZNF726P1Q15940 193 aa6.53□□□□□ -1.36
VCAN-208ENST00000512590 SCN10AQ9Y5Y9 1956 aa6.53□□□□□ -1.36
VCAN-208ENST00000512590 DOCK3Q8IZD9 2030 aa6.53□□□□□ -1.36
VCAN-208ENST00000512590 ATP5EP56381 51 aaPredicted RBP6.52□□□□□ -1.36
VCAN-208ENST00000512590 RTL8CO15255 209 aa6.52□□□□□ -1.37
VCAN-208ENST00000512590 FRMPD3Q5JV73 1810 aa6.52□□□□□ -1.37
VCAN-208ENST00000512590 DYSFO75923 2080 aa6.52□□□□□ -1.37
VCAN-208ENST00000512590 HCG22E2RYF7 251 aa6.52□□□□□ -1.37
VCAN-208ENST00000512590 IGLV1-47P01700 117 aa6.52□□□□□ -1.37
VCAN-208ENST00000512590 PCNX1Q96RV3 2341 aa6.52□□□□□ -1.37
VCAN-208ENST00000512590 LINC00643Q86TS7 51 aa6.52□□□□□ -1.37
VCAN-208ENST00000512590 Q6ZRP5 223 aa6.51□□□□□ -1.37
VCAN-208ENST00000512590 LINC01547P58512 204 aaPredicted RBP6.51□□□□□ -1.37
VCAN-208ENST00000512590 SNURFQ9Y675 71 aa6.51□□□□□ -1.37
VCAN-208ENST00000512590 CELA1Q9UNI1 258 aa6.51□□□□□ -1.37
VCAN-208ENST00000512590 Q8N2B8 174 aa6.51□□□□□ -1.37
VCAN-208ENST00000512590 BRWD3Q6RI45 1802 aa6.5□□□□□ -1.37
VCAN-208ENST00000512590 C22orf34Q6ZV56 151 aa6.5□□□□□ -1.37
VCAN-208ENST00000512590 CRIPAKQ8N1N5 446 aa6.5□□□□□ -1.37
VCAN-208ENST00000512590 ZNF407Q9C0G0 2248 aa6.5□□□□□ -1.37
VCAN-208ENST00000512590 SCN5AQ14524 2016 aa6.5□□□□□ -1.37
VCAN-208ENST00000512590 PARP14Q460N5 1801 aa6.5□□□□□ -1.37
VCAN-208ENST00000512590 PKDREJQ9NTG1 2253 aa6.5□□□□□ -1.37
VCAN-208ENST00000512590 MOBPQ13875 183 aa6.5□□□□□ -1.37
VCAN-208ENST00000512590 NCKAP5O14513 1909 aa6.5□□□□□ -1.37
VCAN-208ENST00000512590 KRTAP10-9P60411 292 aa6.5□□□□□ -1.37
VCAN-208ENST00000512590 FAM186AA6NE01 2351 aa6.49□□□□□ -1.37
VCAN-208ENST00000512590 NDUFC1O43677 76 aa6.49□□□□□ -1.37
VCAN-208ENST00000512590 F8WDY8 70 aa6.49□□□□□ -1.37
VCAN-208ENST00000512590 C9orf116Q5BN46 136 aaPredicted RBP6.49□□□□□ -1.37
VCAN-208ENST00000512590 Q96NJ1 140 aa6.49□□□□□ -1.37
VCAN-208ENST00000512590 RBM12B-AS1Q9P1G2 102 aa6.49□□□□□ -1.37
VCAN-208ENST00000512590 SIPA1L1O43166 1804 aa6.49□□□□□ -1.37
VCAN-208ENST00000512590 A8MZ25 164 aa6.49□□□□□ -1.37
VCAN-208ENST00000512590 UTRNP46939 3433 aa6.49□□□□□ -1.37
VCAN-208ENST00000512590 SPINT4Q6UDR6 99 aa6.49□□□□□ -1.37
VCAN-208ENST00000512590 LINC00308Q8TCZ7 52 aa6.49□□□□□ -1.37
VCAN-208ENST00000512590 ZGRF1Q86YA3 2104 aa6.49□□□□□ -1.37
VCAN-208ENST00000512590 CNOT1A5YKK6 2376 aaKnown RBP6.48□□□□□ -1.37
VCAN-208ENST00000512590 A0A087WSZ3 146 aa6.48□□□□□ -1.37
VCAN-208ENST00000512590 K7EN84 100 aa6.48□□□□□ -1.37
VCAN-208ENST00000512590 BTCP35070 178 aa6.48□□□□□ -1.37
VCAN-208ENST00000512590 C20orf173Q96LM9 149 aa6.48□□□□□ -1.37
VCAN-208ENST00000512590 PSME4Q14997 1843 aa6.48□□□□□ -1.37
VCAN-208ENST00000512590 C16orf95Q9H693 158 aa6.48□□□□□ -1.37
VCAN-208ENST00000512590 H0Y9P7 68 aa6.48□□□□□ -1.37
VCAN-208ENST00000512590 MYLKQ15746 1914 aa6.48□□□□□ -1.37
VCAN-208ENST00000512590 GBF1Q92538 1859 aa6.48□□□□□ -1.37
VCAN-208ENST00000512590 DENND4AQ7Z401 1863 aa6.47□□□□□ -1.37
VCAN-208ENST00000512590 GDF5OSQ5U4N7 250 aa6.47□□□□□ -1.37
VCAN-208ENST00000512590 FREM3P0C091 2139 aa6.47□□□□□ -1.37
VCAN-208ENST00000512590 BEAN1Q3B7T3 259 aa6.47□□□□□ -1.37
VCAN-208ENST00000512590 DEFB116Q30KQ4 102 aa6.47□□□□□ -1.37
VCAN-208ENST00000512590 UNQ6190/PRO20217Q6UXQ8 127 aa6.47□□□□□ -1.37
VCAN-208ENST00000512590 Q8IZM0 81 aa6.47□□□□□ -1.37
VCAN-208ENST00000512590 ARID2Q68CP9 1835 aa6.47□□□□□ -1.37
VCAN-208ENST00000512590 TNCP24821 2201 aa6.46□□□□□ -1.38
VCAN-208ENST00000512590 KIAA2026Q5HYC2 2103 aa6.46□□□□□ -1.38
VCAN-208ENST00000512590 LTBP1Q14766 1721 aa6.46□□□□□ -1.38
VCAN-208ENST00000512590 SBF1O95248 1867 aa6.46□□□□□ -1.38
VCAN-208ENST00000512590 IGLV4-3A0A075B6K6 122 aa6.46□□□□□ -1.38
VCAN-208ENST00000512590 COLCA2A8K830 154 aa6.46□□□□□ -1.38
VCAN-208ENST00000512590 BRWD1-AS2P59051 145 aa6.46□□□□□ -1.38
VCAN-208ENST00000512590 SMCR5Q8TEV8 140 aa6.46□□□□□ -1.38
VCAN-208ENST00000512590 PTPRQQ9UMZ3 2332 aa6.46□□□□□ -1.38
VCAN-208ENST00000512590 KMT2EQ8IZD2 1858 aa6.45□□□□□ -1.38
VCAN-208ENST00000512590 COL4A6Q14031 1691 aa6.45□□□□□ -1.38
VCAN-208ENST00000512590 BRCA1P38398 1863 aaKnown RBP6.45□□□□□ -1.38
VCAN-208ENST00000512590 GVINP1Q7Z2Y8 2422 aa6.45□□□□□ -1.38
VCAN-208ENST00000512590 EBI3Q14213 229 aa6.45□□□□□ -1.38
VCAN-208ENST00000512590 LINC00313P59037 77 aa6.45□□□□□ -1.38
VCAN-208ENST00000512590 APLNQ9ULZ1 77 aa6.45□□□□□ -1.38
VCAN-208ENST00000512590 TET1Q8NFU7 2136 aa6.45□□□□□ -1.38
VCAN-208ENST00000512590 A0A1B0GU69 56 aa6.44□□□□□ -1.38
VCAN-208ENST00000512590 WDR81Q562E7 1941 aa6.44□□□□□ -1.38
VCAN-208ENST00000512590 WNK2Q9Y3S1 2297 aa6.44□□□□□ -1.38
VCAN-208ENST00000512590 ZNF524Q96C55 264 aa6.44□□□□□ -1.38
VCAN-208ENST00000512590 NUPR1O60356 82 aa6.44□□□□□ -1.38
VCAN-208ENST00000512590 TRBV10-3A0A0K0K1G6 114 aa6.43□□□□□ -1.38
VCAN-208ENST00000512590 RSPO1Q2MKA7 263 aaPredicted RBP6.43□□□□□ -1.38
VCAN-208ENST00000512590 C11orf71Q6IPW1 123 aa6.43□□□□□ -1.38
VCAN-208ENST00000512590 Q6ZSN1 163 aa6.43□□□□□ -1.38
VCAN-208ENST00000512590 IGLV5-37A0A075B6J1 123 aa6.43□□□□□ -1.38
VCAN-208ENST00000512590 LYPD5Q6UWN5 251 aa6.43□□□□□ -1.38
VCAN-208ENST00000512590 IGLV1-51P01701 117 aa6.43□□□□□ -1.38
VCAN-208ENST00000512590 MPDZO75970 2070 aa6.43□□□□□ -1.38
VCAN-208ENST00000512590 EPM2AB3EWF7 344 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms