RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 HBBP68871 147 aa8.55□□□□□ -1.04
RNF4-215ENST00000511843 LINC00959A0A1B0GUT2 108 aa8.54□□□□□ -1.04
RNF4-215ENST00000511843 A0A1B0GW15 77 aa8.54□□□□□ -1.04
RNF4-215ENST00000511843 D6R8Y8 96 aa8.54□□□□□ -1.04
RNF4-215ENST00000511843 CKS2P33552 79 aa8.54□□□□□ -1.04
RNF4-215ENST00000511843 RNASE13Q5GAN3 156 aaKnown RBP8.54□□□□□ -1.04
RNF4-215ENST00000511843 SDIM1Q6ZPB5 146 aa8.54□□□□□ -1.04
RNF4-215ENST00000511843 CCL25O15444 150 aa8.53□□□□□ -1.04
RNF4-215ENST00000511843 TNFRSF6BO95407 300 aa8.53□□□□□ -1.04
RNF4-215ENST00000511843 PPP1R17O96001 155 aa8.53□□□□□ -1.04
RNF4-215ENST00000511843 NPYP01303 97 aa8.53□□□□□ -1.04
RNF4-215ENST00000511843 CNBPP62633 177 aaKnown RBP8.53□□□□□ -1.04
RNF4-215ENST00000511843 IFITM2Q01629 132 aa8.53□□□□□ -1.04
RNF4-215ENST00000511843 FOXI1Q12951 378 aa8.53□□□□□ -1.04
RNF4-215ENST00000511843 MRPL52Q86TS9 123 aaKnown RBP8.53□□□□□ -1.04
RNF4-215ENST00000511843 KIR2DL4Q99706 377 aa8.53□□□□□ -1.04
RNF4-215ENST00000511843 CDC42SE2Q9NRR3 84 aa8.53□□□□□ -1.04
RNF4-215ENST00000511843 AP5S1Q9NUS5 200 aa8.53□□□□□ -1.04
RNF4-215ENST00000511843 PPP1R2P9O14990 202 aa8.52□□□□□ -1.05
RNF4-215ENST00000511843 PLA2G1BP04054 148 aaKnown RBP8.52□□□□□ -1.05
RNF4-215ENST00000511843 CHTF8P0CG12 524 aa8.52□□□□□ -1.05
RNF4-215ENST00000511843 ZNF664Q8N3J9 261 aa8.52□□□□□ -1.05
RNF4-215ENST00000511843 MYCBP2O75592 4640 aa8.51□□□□□ -1.05
RNF4-215ENST00000511843 LINC00862A6NCI5 91 aa8.51□□□□□ -1.05
RNF4-215ENST00000511843 F8W036 122 aa8.51□□□□□ -1.05
RNF4-215ENST00000511843 S100A8P05109 93 aa8.51□□□□□ -1.05
RNF4-215ENST00000511843 CLLU1Q5K131 121 aa8.51□□□□□ -1.05
RNF4-215ENST00000511843 LINC00526Q96FQ7 95 aa8.51□□□□□ -1.05
RNF4-215ENST00000511843 UBE2D4Q9Y2X8 147 aa8.51□□□□□ -1.05
RNF4-215ENST00000511843 TRBV24-1A0A075B6N3 115 aa8.5□□□□□ -1.05
RNF4-215ENST00000511843 IGHV3-64A0A075B6Q5 118 aa8.5□□□□□ -1.05
RNF4-215ENST00000511843 KRTAP10-4P60372 401 aaPredicted RBP8.5□□□□□ -1.05
RNF4-215ENST00000511843 RPL39P62891 51 aaKnown RBP8.5□□□□□ -1.05
RNF4-215ENST00000511843 CFAP161Q6P656 301 aa8.5□□□□□ -1.05
RNF4-215ENST00000511843 Q6ZUT4 128 aa8.5□□□□□ -1.05
RNF4-215ENST00000511843 C20orf78Q9BR46 151 aa8.5□□□□□ -1.05
RNF4-215ENST00000511843 SMIM2Q9BVW6 85 aa8.5□□□□□ -1.05
RNF4-215ENST00000511843 GVQW2A0A096LPI5 108 aaPredicted RBP8.49□□□□□ -1.05
RNF4-215ENST00000511843 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.49□□□□□ -1.05
RNF4-215ENST00000511843 TCAPO15273 167 aa8.49□□□□□ -1.05
RNF4-215ENST00000511843 MT-ND4LP03901 98 aa8.49□□□□□ -1.05
RNF4-215ENST00000511843 ADCYAP1P18509 176 aa8.49□□□□□ -1.05
RNF4-215ENST00000511843 PNRC1Q12796 327 aaPredicted RBP8.49□□□□□ -1.05
RNF4-215ENST00000511843 SS18Q15532 418 aa8.49□□□□□ -1.05
RNF4-215ENST00000511843 TRAV13-1A0A0B4J241 112 aa8.48□□□□□ -1.05
RNF4-215ENST00000511843 ATP5L2Q7Z4Y8 100 aa8.48□□□□□ -1.05
RNF4-215ENST00000511843 PRELID3AQ96N28 172 aa8.48□□□□□ -1.05
RNF4-215ENST00000511843 HERC1Q15751 4861 aa8.48□□□□□ -1.05
RNF4-215ENST00000511843 RPL32P62910 135 aaKnown RBP8.47□□□□□ -1.05
RNF4-215ENST00000511843 COX6A2Q02221 97 aa8.47□□□□□ -1.05
RNF4-215ENST00000511843 TMEM136Q6ZRR5 245 aa8.47□□□□□ -1.05
RNF4-215ENST00000511843 ORMDL3Q8N138 153 aa8.47□□□□□ -1.05
RNF4-215ENST00000511843 PRSS3P2Q8NHM4 247 aa8.47□□□□□ -1.05
RNF4-215ENST00000511843 FAM104AQ969W3 186 aa8.47□□□□□ -1.05
RNF4-215ENST00000511843 ANAPC16Q96DE5 110 aa8.47□□□□□ -1.05
RNF4-215ENST00000511843 OPRPNQ99935 248 aaPredicted RBP8.47□□□□□ -1.05
RNF4-215ENST00000511843 IGHV1-58A0A0C4DH39 117 aa8.46□□□□□ -1.06
RNF4-215ENST00000511843 PPBPP02775 128 aa8.46□□□□□ -1.06
RNF4-215ENST00000511843 CIRBPQ14011 172 aaKnown RBP8.46□□□□□ -1.06
RNF4-215ENST00000511843 CD164L2Q6UWJ8 174 aa8.46□□□□□ -1.06
RNF4-215ENST00000511843 DPH3Q96FX2 82 aa8.46□□□□□ -1.06
RNF4-215ENST00000511843 CSDC2Q9Y534 153 aaKnown RBP8.46□□□□□ -1.06
RNF4-215ENST00000511843 IGKV2-24A0A0C4DH68 120 aa8.45□□□□□ -1.06
RNF4-215ENST00000511843 LOC389332A0A1B0GUA5 103 aa8.45□□□□□ -1.06
RNF4-215ENST00000511843 C1orf196B1AJZ1 125 aa8.45□□□□□ -1.06
RNF4-215ENST00000511843 RPL37AP61513 92 aaKnown RBP8.45□□□□□ -1.06
RNF4-215ENST00000511843 SPACA4Q8TDM5 124 aa8.45□□□□□ -1.06
RNF4-215ENST00000511843 TMEM18Q96B42 140 aa8.45□□□□□ -1.06
RNF4-215ENST00000511843 TIMM21Q9BVV7 248 aa8.45□□□□□ -1.06
RNF4-215ENST00000511843 A0A087WYN8 130 aa8.44□□□□□ -1.06
RNF4-215ENST00000511843 PHOX2AO14813 284 aa8.44□□□□□ -1.06
RNF4-215ENST00000511843 SMAGPQ0VAQ4 97 aa8.44□□□□□ -1.06
RNF4-215ENST00000511843 C5orf38Q86SI9 138 aa8.44□□□□□ -1.06
RNF4-215ENST00000511843 DMBT1Q9UGM3 2413 aaPredicted RBP8.43□□□□□ -1.06
RNF4-215ENST00000511843 A0A096LNI7 61 aa8.43□□□□□ -1.06
RNF4-215ENST00000511843 TMEM218A2RU14 115 aa8.43□□□□□ -1.06
RNF4-215ENST00000511843 COX7A2LO14548 114 aa8.43□□□□□ -1.06
RNF4-215ENST00000511843 MALP21145 153 aa8.43□□□□□ -1.06
RNF4-215ENST00000511843 HNRNPA3P51991 378 aaKnown RBP8.43□□□□□ -1.06
RNF4-215ENST00000511843 MAJINQ3KP22 176 aa8.43□□□□□ -1.06
RNF4-215ENST00000511843 PKHD1L1Q86WI1 4243 aa8.43□□□□□ -1.06
RNF4-215ENST00000511843 IGLV4-69A0A075B6H9 119 aa8.42□□□□□ -1.06
RNF4-215ENST00000511843 RAB5AP20339 215 aa8.42□□□□□ -1.06
RNF4-215ENST00000511843 UQCC3Q6UW78 93 aa8.42□□□□□ -1.06
RNF4-215ENST00000511843 CARD19Q96LW7 228 aa8.42□□□□□ -1.06
RNF4-215ENST00000511843 SPANXA1Q9NS26 97 aa8.42□□□□□ -1.06
RNF4-215ENST00000511843 ZNF561-AS1K7EIQ3 104 aa8.41□□□□□ -1.06
RNF4-215ENST00000511843 COMMD7Q86VX2 200 aa8.41□□□□□ -1.06
RNF4-215ENST00000511843 MAP1LC3AQ9H492 121 aa8.41□□□□□ -1.06
RNF4-215ENST00000511843 IFITM10A6NMD0 228 aa8.4□□□□□ -1.06
RNF4-215ENST00000511843 J3QL48 77 aa8.4□□□□□ -1.06
RNF4-215ENST00000511843 SYCNQ0VAF6 134 aa8.4□□□□□ -1.06
RNF4-215ENST00000511843 KIAA1644Q3SXP7 199 aa8.4□□□□□ -1.06
RNF4-215ENST00000511843 PLAC8Q9NZF1 115 aa8.4□□□□□ -1.06
RNF4-215ENST00000511843 PRSS47A8MTI9 375 aa8.39□□□□□ -1.07
RNF4-215ENST00000511843 MRPS36P82909 103 aaKnown RBP8.39□□□□□ -1.07
RNF4-215ENST00000511843 ZC2HC1BQ5TFG8 222 aa8.39□□□□□ -1.07
RNF4-215ENST00000511843 Q6ZRU5 148 aa8.39□□□□□ -1.07
RNF4-215ENST00000511843 STPG4Q8N801 248 aa8.39□□□□□ -1.07
RNF4-215ENST00000511843 CTDSP1Q9GZU7 261 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms