RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 RASL11AQ6T310 242 aa1.69□□□□□ -2.14
TOPBP1-208ENST00000511439 TMEM136Q6ZRR5 245 aa1.69□□□□□ -2.14
TOPBP1-208ENST00000511439 PBDC1Q9BVG4 233 aa1.69□□□□□ -2.14
TOPBP1-208ENST00000511439 MRPL32Q9BYC8 188 aaKnown RBP1.69□□□□□ -2.14
TOPBP1-208ENST00000511439 RNASE7Q9H1E1 156 aaKnown RBP1.69□□□□□ -2.14
TOPBP1-208ENST00000511439 BATF3Q9NR55 127 aa1.69□□□□□ -2.14
TOPBP1-208ENST00000511439 CMC2Q9NRP2 79 aa1.69□□□□□ -2.14
TOPBP1-208ENST00000511439 RPRMQ9NS64 109 aa1.69□□□□□ -2.14
TOPBP1-208ENST00000511439 PRNDQ9UKY0 176 aa1.69□□□□□ -2.14
TOPBP1-208ENST00000511439 SSR3Q9UNL2 185 aa1.69□□□□□ -2.14
TOPBP1-208ENST00000511439 TRAV9-1A0A075B6T8 112 aa1.68□□□□□ -2.14
TOPBP1-208ENST00000511439 TRGV4A0A0C4DH28 118 aa1.68□□□□□ -2.14
TOPBP1-208ENST00000511439 MUC21A0A0G2JKD1 596 aa1.68□□□□□ -2.14
TOPBP1-208ENST00000511439 IGSF23A1L1A6 192 aa1.68□□□□□ -2.14
TOPBP1-208ENST00000511439 PLA2G10O15496 165 aa1.68□□□□□ -2.14
TOPBP1-208ENST00000511439 NPYP01303 97 aa1.68□□□□□ -2.14
TOPBP1-208ENST00000511439 NBEAP1P0C6P0 100 aa1.68□□□□□ -2.14
TOPBP1-208ENST00000511439 SPRR2EP22531 72 aa1.68□□□□□ -2.14
TOPBP1-208ENST00000511439 SPRR2BP35325 72 aa1.68□□□□□ -2.14
TOPBP1-208ENST00000511439 SPRR2AP35326 72 aa1.68□□□□□ -2.14
TOPBP1-208ENST00000511439 RHOBP62745 196 aa1.68□□□□□ -2.14
TOPBP1-208ENST00000511439 S100A12P80511 92 aa1.68□□□□□ -2.14
TOPBP1-208ENST00000511439 AKR1C1Q04828 323 aa1.68□□□□□ -2.14
TOPBP1-208ENST00000511439 LGALSLQ3ZCW2 172 aaPredicted RBP1.68□□□□□ -2.14
TOPBP1-208ENST00000511439 SCGB2B2Q4G0G5 96 aa1.68□□□□□ -2.14
TOPBP1-208ENST00000511439 RPL22L1Q6P5R6 122 aaKnown RBP1.68□□□□□ -2.14
TOPBP1-208ENST00000511439 ADM2Q7Z4H4 148 aa1.68□□□□□ -2.14
TOPBP1-208ENST00000511439 C12orf45Q8N5I9 185 aaPredicted RBP1.68□□□□□ -2.14
TOPBP1-208ENST00000511439 DAND5Q8N907 189 aa1.68□□□□□ -2.14
TOPBP1-208ENST00000511439 OR8D4Q8NGM9 314 aa1.68□□□□□ -2.14
TOPBP1-208ENST00000511439 TOMM6Q96B49 74 aa1.68□□□□□ -2.14
TOPBP1-208ENST00000511439 S100A13Q99584 98 aa1.68□□□□□ -2.14
TOPBP1-208ENST00000511439 SMDT1Q9H4I9 107 aa1.68□□□□□ -2.14
TOPBP1-208ENST00000511439 EFCAB1Q9HAE3 211 aa1.68□□□□□ -2.14
TOPBP1-208ENST00000511439 SPANXA1Q9NS26 97 aa1.68□□□□□ -2.14
TOPBP1-208ENST00000511439 TRBV19A0A075B6N1 114 aa1.67□□□□□ -2.14
TOPBP1-208ENST00000511439 IGKV2-24A0A0C4DH68 120 aa1.67□□□□□ -2.14
TOPBP1-208ENST00000511439 LOC105371267A0A1B0GV96 52 aa1.67□□□□□ -2.14
TOPBP1-208ENST00000511439 MT-ND6P03923 174 aa1.67□□□□□ -2.14
TOPBP1-208ENST00000511439 IGKV4-1P06312 121 aa1.67□□□□□ -2.14
TOPBP1-208ENST00000511439 S100A7P31151 101 aa1.67□□□□□ -2.14
TOPBP1-208ENST00000511439 G6PCP35575 357 aa1.67□□□□□ -2.14
TOPBP1-208ENST00000511439 CSN1S1P47710 185 aa1.67□□□□□ -2.14
TOPBP1-208ENST00000511439 SERPINB10P48595 397 aa1.67□□□□□ -2.14
TOPBP1-208ENST00000511439 SMIM11AP58511 58 aa1.67□□□□□ -2.14
TOPBP1-208ENST00000511439 TAS2R30P59541 319 aa1.67□□□□□ -2.14
TOPBP1-208ENST00000511439 HIST1H4AP62805 103 aaKnown RBP1.67□□□□□ -2.14
TOPBP1-208ENST00000511439 CCL20P78556 96 aa1.67□□□□□ -2.14
TOPBP1-208ENST00000511439 WT1-ASQ06250 92 aa1.67□□□□□ -2.14
TOPBP1-208ENST00000511439 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
TOPBP1-208ENST00000511439 TMEM244Q5VVB8 128 aa1.67□□□□□ -2.14
TOPBP1-208ENST00000511439 Q6Q795 121 aa1.67□□□□□ -2.14
TOPBP1-208ENST00000511439 FP248Q71RG6 208 aaPredicted RBP1.67□□□□□ -2.14
TOPBP1-208ENST00000511439 LSM10Q969L4 123 aaKnown RBP1.67□□□□□ -2.14
TOPBP1-208ENST00000511439 CGREF1Q99674 301 aa1.67□□□□□ -2.14
TOPBP1-208ENST00000511439 IMUPQ9GZP8 106 aa1.67□□□□□ -2.14
TOPBP1-208ENST00000511439 CCDC167Q9P0B6 97 aa1.67□□□□□ -2.14
TOPBP1-208ENST00000511439 IGKV1D-37A0A075B6S9 117 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 TRAV4A0A0B4J268 109 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 IRGMA1A4Y4 181 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 MAP1LC3B2A6NCE7 125 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 I3L2K1 104 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 GADD45GO95257 159 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 CDS2O95674 445 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 HTR1AP08908 422 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 TRAPPC2P0DI81 140 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 TRAPPC2BP0DI82 140 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 SCGB1A1P11684 91 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 HIST1H2BOP23527 126 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 S100GP29377 79 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 HIST1H2BBP33778 126 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 LPAR6P43657 344 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 HIST1H2BDP58876 126 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 HIST1H2BCP62807 126 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 RPL30P62888 115 aaKnown RBP1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 GNG5P63218 68 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 Q0VG73 95 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 HIST2H2BEQ16778 126 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 C1orf137Q5JT78 98 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 TMEM78Q5T7P6 136 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 LYRM7Q5U5X0 104 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 AMMECR1LQ6DCA0 310 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 OR10P1Q8NGE3 313 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 OR5D14Q8NGL3 314 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 CMTM2Q8TAZ6 248 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 HIST1H2BHQ93079 126 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 HIST1H2BNQ99877 126 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 HIST1H2BMQ99879 126 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 MAP1LC3BQ9GZQ8 125 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 DUSP21Q9H596 190 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 BET1LQ9NYM9 111 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 LINC00474Q9P2X8 69 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 SS18L2Q9UHA2 77 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 HSPB11Q9Y547 144 aa1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 RBM7Q9Y580 266 aaKnown RBP1.66□□□□□ -2.14
TOPBP1-208ENST00000511439 IGHV3-73A0A0B4J1V6 119 aa1.65□□□□□ -2.15
TOPBP1-208ENST00000511439 A0A1B0GU33 70 aa1.65□□□□□ -2.15
TOPBP1-208ENST00000511439 ZNF670-ZNF695F2Z2N8 137 aa1.65□□□□□ -2.15
TOPBP1-208ENST00000511439 SPINK4O60575 86 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms