RNA–Protein interactions for RNA: ENST00000510710.3

COL1A1-212, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,147 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-212ENST00000510710 SMIM2Q9BVW6 85 aa9.8□□□□□ -0.84
COL1A1-212ENST00000510710 IGKV2D-24A0A075B6R9 120 aa9.79□□□□□ -0.84
COL1A1-212ENST00000510710 CHAC1Q9BUX1 264 aa9.79□□□□□ -0.84
COL1A1-212ENST00000510710 MAP1LC3AQ9H492 121 aa9.79□□□□□ -0.84
COL1A1-212ENST00000510710 DNAH8Q96JB1 4490 aa9.79□□□□□ -0.84
COL1A1-212ENST00000510710 VCYO14598 125 aa9.78□□□□□ -0.84
COL1A1-212ENST00000510710 OXTP01178 125 aa9.78□□□□□ -0.84
COL1A1-212ENST00000510710 IQCJQ1A5X6 159 aa9.78□□□□□ -0.84
COL1A1-212ENST00000510710 NTM-AS1Q6ZSK4 140 aa9.78□□□□□ -0.84
COL1A1-212ENST00000510710 URB1-AS1Q96HZ7 61 aa9.78□□□□□ -0.84
COL1A1-212ENST00000510710 LINC01546A6NGU7 62 aa9.77□□□□□ -0.85
COL1A1-212ENST00000510710 I3L3M4 83 aa9.77□□□□□ -0.85
COL1A1-212ENST00000510710 TSHBP01222 138 aa9.77□□□□□ -0.85
COL1A1-212ENST00000510710 IFI27P40305 119 aaPredicted RBP9.77□□□□□ -0.85
COL1A1-212ENST00000510710 Q0VG73 95 aa9.77□□□□□ -0.85
COL1A1-212ENST00000510710 Q8N8P6 123 aa9.77□□□□□ -0.85
COL1A1-212ENST00000510710 CIRBP-AS1Q8TBR5 109 aa9.77□□□□□ -0.85
COL1A1-212ENST00000510710 LOC389332A0A1B0GUA5 103 aa9.76□□□□□ -0.85
COL1A1-212ENST00000510710 HIST1H2BKO60814 126 aa9.76□□□□□ -0.85
COL1A1-212ENST00000510710 HIST1H2BJP06899 126 aa9.76□□□□□ -0.85
COL1A1-212ENST00000510710 HIST1H2BOP23527 126 aa9.76□□□□□ -0.85
COL1A1-212ENST00000510710 HIST1H2BBP33778 126 aa9.76□□□□□ -0.85
COL1A1-212ENST00000510710 HIST1H2BDP58876 126 aa9.76□□□□□ -0.85
COL1A1-212ENST00000510710 HIST1H2BCP62807 126 aa9.76□□□□□ -0.85
COL1A1-212ENST00000510710 HIST2H2BEQ16778 126 aa9.76□□□□□ -0.85
COL1A1-212ENST00000510710 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.76□□□□□ -0.85
COL1A1-212ENST00000510710 NIT1Q86X76 327 aa9.76□□□□□ -0.85
COL1A1-212ENST00000510710 HIST1H2BHQ93079 126 aa9.76□□□□□ -0.85
COL1A1-212ENST00000510710 HIST1H2BNQ99877 126 aa9.76□□□□□ -0.85
COL1A1-212ENST00000510710 HIST1H2BMQ99879 126 aa9.76□□□□□ -0.85
COL1A1-212ENST00000510710 NXT2Q9NPJ8 142 aaKnown RBP9.76□□□□□ -0.85
COL1A1-212ENST00000510710 KLK12Q9UKR0 248 aa9.76□□□□□ -0.85
COL1A1-212ENST00000510710 C1orf196B1AJZ1 125 aa9.75□□□□□ -0.85
COL1A1-212ENST00000510710 PMCHP20382 165 aa9.75□□□□□ -0.85
COL1A1-212ENST00000510710 KRTAP10-4P60372 401 aaPredicted RBP9.75□□□□□ -0.85
COL1A1-212ENST00000510710 UBE2WQ96B02 151 aa9.75□□□□□ -0.85
COL1A1-212ENST00000510710 A0A087WX48 190 aa9.74□□□□□ -0.85
COL1A1-212ENST00000510710 TRBV6-8A0A0A6YYG3 113 aa9.74□□□□□ -0.85
COL1A1-212ENST00000510710 ESDP10768 282 aa9.74□□□□□ -0.85
COL1A1-212ENST00000510710 LINC00310P59036 64 aa9.74□□□□□ -0.85
COL1A1-212ENST00000510710 COTL1Q14019 142 aa9.74□□□□□ -0.85
COL1A1-212ENST00000510710 CHCHD7Q9BUK0 85 aa9.74□□□□□ -0.85
COL1A1-212ENST00000510710 PLA2G2DQ9UNK4 145 aa9.74□□□□□ -0.85
COL1A1-212ENST00000510710 TCAPO15273 167 aa9.73□□□□□ -0.85
COL1A1-212ENST00000510710 TMEM97Q5BJF2 176 aa9.73□□□□□ -0.85
COL1A1-212ENST00000510710 KIR2DL4Q99706 377 aa9.73□□□□□ -0.85
COL1A1-212ENST00000510710 K7EMI3 77 aa9.72□□□□□ -0.85
COL1A1-212ENST00000510710 PRSS3P2Q8NHM4 247 aa9.72□□□□□ -0.85
COL1A1-212ENST00000510710 LINC00614P0C842 121 aa9.71□□□□□ -0.86
COL1A1-212ENST00000510710 C14orf177Q52M58 125 aa9.71□□□□□ -0.86
COL1A1-212ENST00000510710 COA6Q5JTJ3 125 aaKnown RBP9.71□□□□□ -0.86
COL1A1-212ENST00000510710 TRBV25-1A0A075B6N4 114 aa9.7□□□□□ -0.86
COL1A1-212ENST00000510710 IGHV1-24A0A0C4DH33 117 aa9.7□□□□□ -0.86
COL1A1-212ENST00000510710 TMEM262E9PQX1 116 aa9.7□□□□□ -0.86
COL1A1-212ENST00000510710 NUPR1O60356 82 aa9.7□□□□□ -0.86
COL1A1-212ENST00000510710 RPL37AP61513 92 aaKnown RBP9.7□□□□□ -0.86
COL1A1-212ENST00000510710 FA2HQ7L5A8 372 aa9.7□□□□□ -0.86
COL1A1-212ENST00000510710 C1orf43Q9BWL3 253 aa9.7□□□□□ -0.86
COL1A1-212ENST00000510710 A0A096LNJ9 63 aa9.69□□□□□ -0.86
COL1A1-212ENST00000510710 FCER1GP30273 86 aa9.69□□□□□ -0.86
COL1A1-212ENST00000510710 AMTP48728 403 aa9.69□□□□□ -0.86
COL1A1-212ENST00000510710 RAB5BP61020 215 aa9.69□□□□□ -0.86
COL1A1-212ENST00000510710 ORMDL2Q53FV1 153 aa9.69□□□□□ -0.86
COL1A1-212ENST00000510710 C20orf203Q8NBC4 194 aa9.69□□□□□ -0.86
COL1A1-212ENST00000510710 CHCHD1Q96BP2 118 aaKnown RBP9.69□□□□□ -0.86
COL1A1-212ENST00000510710 TMEM243Q9BU79 118 aa9.69□□□□□ -0.86
COL1A1-212ENST00000510710 AP5S1Q9NUS5 200 aa9.69□□□□□ -0.86
COL1A1-212ENST00000510710 SERF1AO75920 110 aa9.68□□□□□ -0.86
COL1A1-212ENST00000510710 BAGE3Q86Y29 109 aa9.68□□□□□ -0.86
COL1A1-212ENST00000510710 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.67□□□□□ -0.86
COL1A1-212ENST00000510710 IGKV2-29A2NJV5 120 aaPredicted RBP9.67□□□□□ -0.86
COL1A1-212ENST00000510710 H7C423 109 aa9.67□□□□□ -0.86
COL1A1-212ENST00000510710 CRPP02741 224 aa9.67□□□□□ -0.86
COL1A1-212ENST00000510710 RNASEKQ6P5S7 137 aaKnown RBP9.67□□□□□ -0.86
COL1A1-212ENST00000510710 LRP1Q07954 4544 aaKnown RBP9.66□□□□□ -0.86
COL1A1-212ENST00000510710 NDUFA6P56556 154 aa9.66□□□□□ -0.86
COL1A1-212ENST00000510710 RPL39P62891 51 aaKnown RBP9.66□□□□□ -0.86
COL1A1-212ENST00000510710 ENHOQ6UWT2 76 aa9.66□□□□□ -0.86
COL1A1-212ENST00000510710 ANGP03950 147 aaKnown RBP9.65□□□□□ -0.86
COL1A1-212ENST00000510710 C2orf66Q6UXQ4 117 aa9.65□□□□□ -0.86
COL1A1-212ENST00000510710 MRPL52Q86TS9 123 aaKnown RBP9.65□□□□□ -0.86
COL1A1-212ENST00000510710 FAM104AQ969W3 186 aa9.65□□□□□ -0.86
COL1A1-212ENST00000510710 TOMM6Q96B49 74 aa9.65□□□□□ -0.86
COL1A1-212ENST00000510710 CHCHD5Q9BSY4 110 aa9.65□□□□□ -0.86
COL1A1-212ENST00000510710 USP17L23D6RBM5 183 aa9.64□□□□□ -0.87
COL1A1-212ENST00000510710 GAGE6Q13070 117 aa9.64□□□□□ -0.87
COL1A1-212ENST00000510710 PMCHL1Q16048 86 aa9.64□□□□□ -0.87
COL1A1-212ENST00000510710 TIMM21Q9BVV7 248 aa9.64□□□□□ -0.87
COL1A1-212ENST00000510710 UBE2D4Q9Y2X8 147 aa9.64□□□□□ -0.87
COL1A1-212ENST00000510710 A0A1B0GUV1 79 aa9.63□□□□□ -0.87
COL1A1-212ENST00000510710 FGF6P10767 208 aa9.63□□□□□ -0.87
COL1A1-212ENST00000510710 HNRNPA3P51991 378 aaKnown RBP9.63□□□□□ -0.87
COL1A1-212ENST00000510710 MPV17L2Q567V2 206 aa9.63□□□□□ -0.87
COL1A1-212ENST00000510710 PDZD11Q5EBL8 140 aa9.63□□□□□ -0.87
COL1A1-212ENST00000510710 TMEM18Q96B42 140 aa9.63□□□□□ -0.87
COL1A1-212ENST00000510710 CYSLTR1Q9Y271 337 aa9.63□□□□□ -0.87
COL1A1-212ENST00000510710 CSDC2Q9Y534 153 aaKnown RBP9.63□□□□□ -0.87
COL1A1-212ENST00000510710 IGIPA6NJ69 53 aa9.62□□□□□ -0.87
COL1A1-212ENST00000510710 UBE2L6O14933 153 aa9.62□□□□□ -0.87
COL1A1-212ENST00000510710 HSBP1O75506 76 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms