RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 IGLC2P0DOY2 106 aa2.17□□□□□ -2.06
NUP54-209ENST00000510569 IGLC3P0DOY3 106 aa2.17□□□□□ -2.06
NUP54-209ENST00000510569 CBLN1P23435 193 aa2.17□□□□□ -2.06
NUP54-209ENST00000510569 FXYD2P54710 66 aa2.17□□□□□ -2.06
NUP54-209ENST00000510569 SPANXA2-OT1Q8N9U9 137 aa2.17□□□□□ -2.06
NUP54-209ENST00000510569 AMELYQ99218 206 aa2.17□□□□□ -2.06
NUP54-209ENST00000510569 C20orf78Q9BR46 151 aa2.17□□□□□ -2.06
NUP54-209ENST00000510569 SLC50A1Q9BRV3 221 aa2.17□□□□□ -2.06
NUP54-209ENST00000510569 ZNF222Q9UK12 451 aa2.17□□□□□ -2.06
NUP54-209ENST00000510569 U3KQK5 164 aa2.17□□□□□ -2.06
NUP54-209ENST00000510569 TNRC6AQ8NDV7 1962 aaKnown RBP2.17□□□□□ -2.06
NUP54-209ENST00000510569 ZFHX2Q9C0A1 2572 aaPredicted RBP2.17□□□□□ -2.06
NUP54-209ENST00000510569 CNTRLQ7Z7A1 2325 aa2.17□□□□□ -2.06
NUP54-209ENST00000510569 SPAG17Q6Q759 2223 aa2.17□□□□□ -2.06
NUP54-209ENST00000510569 CACNA1GO43497 2377 aa2.16□□□□□ -2.06
NUP54-209ENST00000510569 USP24Q9UPU5 2620 aa2.16□□□□□ -2.06
NUP54-209ENST00000510569 UNC13CQ8NB66 2214 aa2.16□□□□□ -2.06
NUP54-209ENST00000510569 IGKV1D-37A0A075B6S9 117 aa2.16□□□□□ -2.06
NUP54-209ENST00000510569 TRAV7A0A075B6U4 112 aa2.16□□□□□ -2.06
NUP54-209ENST00000510569 TRAV1-1A0A0B4J248 108 aa2.16□□□□□ -2.06
NUP54-209ENST00000510569 A0A0B4J2C4 111 aa2.16□□□□□ -2.06
NUP54-209ENST00000510569 TRBV10-2A0A0K0K1G8 114 aa2.16□□□□□ -2.06
NUP54-209ENST00000510569 A8MUU9 505 aa2.16□□□□□ -2.06
NUP54-209ENST00000510569 IBA57-AS1B1ANH7 110 aa2.16□□□□□ -2.06
NUP54-209ENST00000510569 NUPR1O60356 82 aa2.16□□□□□ -2.06
NUP54-209ENST00000510569 IGLV1-51P01701 117 aa2.16□□□□□ -2.06
NUP54-209ENST00000510569 STATHP02808 62 aa2.16□□□□□ -2.06
NUP54-209ENST00000510569 FAUP35544 74 aaKnown RBP2.16□□□□□ -2.06
NUP54-209ENST00000510569 ESRGQ1W209 222 aa2.16□□□□□ -2.06
NUP54-209ENST00000510569 DEFB134Q4QY38 66 aa2.16□□□□□ -2.06
NUP54-209ENST00000510569 KIAA2026Q5HYC2 2103 aa2.16□□□□□ -2.06
NUP54-209ENST00000510569 SPANXN1Q5VSR9 72 aa2.16□□□□□ -2.06
NUP54-209ENST00000510569 HEPN1Q6WQI6 88 aa2.16□□□□□ -2.06
NUP54-209ENST00000510569 Q8N814 137 aa2.16□□□□□ -2.06
NUP54-209ENST00000510569 PPDPFLQ8WWR9 84 aa2.16□□□□□ -2.06
NUP54-209ENST00000510569 MGST2Q99735 147 aa2.16□□□□□ -2.06
NUP54-209ENST00000510569 NMES1Q9C002 83 aa2.16□□□□□ -2.06
NUP54-209ENST00000510569 CST11Q9H112 138 aa2.16□□□□□ -2.06
NUP54-209ENST00000510569 CACFD1Q9UGQ2 172 aa2.16□□□□□ -2.06
NUP54-209ENST00000510569 SPCS1Q9Y6A9 102 aa2.16□□□□□ -2.06
NUP54-209ENST00000510569 R4GMQ9 66 aa2.16□□□□□ -2.06
NUP54-209ENST00000510569 MED12Q93074 2177 aa2.16□□□□□ -2.06
NUP54-209ENST00000510569 WDFY3Q8IZQ1 3526 aa2.16□□□□□ -2.06
NUP54-209ENST00000510569 ZNF407Q9C0G0 2248 aa2.15□□□□□ -2.06
NUP54-209ENST00000510569 AKAP13Q12802 2813 aa2.15□□□□□ -2.06
NUP54-209ENST00000510569 ZDBF2Q9HCK1 2354 aa2.15□□□□□ -2.06
NUP54-209ENST00000510569 GVINP1Q7Z2Y8 2422 aa2.15□□□□□ -2.07
NUP54-209ENST00000510569 IGLV3-12A0A075B6K2 115 aa2.15□□□□□ -2.07
NUP54-209ENST00000510569 SPTY2D1-AS1A0A0U1RR47 76 aa2.15□□□□□ -2.07
NUP54-209ENST00000510569 MDFIC2A0A1B0GVS7 189 aa2.15□□□□□ -2.07
NUP54-209ENST00000510569 A0A1W2PPM0 123 aa2.15□□□□□ -2.07
NUP54-209ENST00000510569 C17orf98A8MV24 154 aa2.15□□□□□ -2.07
NUP54-209ENST00000510569 ZNF705FA8MVS1 300 aaPredicted RBP2.15□□□□□ -2.07
NUP54-209ENST00000510569 H3BPC8 53 aa2.15□□□□□ -2.07
NUP54-209ENST00000510569 H3BQ85 93 aa2.15□□□□□ -2.07
NUP54-209ENST00000510569 SIX6O95475 246 aa2.15□□□□□ -2.07
NUP54-209ENST00000510569 HINT1P49773 126 aaPredicted RBP2.15□□□□□ -2.07
NUP54-209ENST00000510569 ROMO1P60602 79 aa2.15□□□□□ -2.07
NUP54-209ENST00000510569 KRTDAPP60985 99 aa2.15□□□□□ -2.07
NUP54-209ENST00000510569 ZNF117Q03924 483 aa2.15□□□□□ -2.07
NUP54-209ENST00000510569 LYZL1Q6UWQ5 148 aa2.15□□□□□ -2.07
NUP54-209ENST00000510569 C1orf64Q8NEQ6 169 aa2.15□□□□□ -2.07
NUP54-209ENST00000510569 OR10AG1Q8NH19 301 aa2.15□□□□□ -2.07
NUP54-209ENST00000510569 PPP1R1CQ8WVI7 109 aa2.15□□□□□ -2.07
NUP54-209ENST00000510569 KRTAP4-1Q9BYQ7 146 aa2.15□□□□□ -2.07
NUP54-209ENST00000510569 TIMM9Q9Y5J7 89 aa2.15□□□□□ -2.07
NUP54-209ENST00000510569 NBEAQ8NFP9 2946 aa2.15□□□□□ -2.07
NUP54-209ENST00000510569 USF3Q68DE3 2245 aa2.15□□□□□ -2.07
NUP54-209ENST00000510569 PLXNB1O43157 2135 aa2.15□□□□□ -2.07
NUP54-209ENST00000510569 SDK2Q58EX2 2172 aa2.15□□□□□ -2.07
NUP54-209ENST00000510569 FRYQ5TBA9 3013 aa2.15□□□□□ -2.07
NUP54-209ENST00000510569 ZFHX4Q86UP3 3567 aa2.14□□□□□ -2.07
NUP54-209ENST00000510569 CHD6Q8TD26 2715 aa2.14□□□□□ -2.07
NUP54-209ENST00000510569 PI4KAP42356 2102 aa2.14□□□□□ -2.07
NUP54-209ENST00000510569 FXYD6-FXYD2A0A087WZ82 144 aa2.14□□□□□ -2.07
NUP54-209ENST00000510569 IGKV2D-26A0A0A0MRZ7 120 aa2.14□□□□□ -2.07
NUP54-209ENST00000510569 TRAV2A0A0B4J234 112 aa2.14□□□□□ -2.07
NUP54-209ENST00000510569 hADV29S1A0JD25 119 aa2.14□□□□□ -2.07
NUP54-209ENST00000510569 CCKP06307 115 aa2.14□□□□□ -2.07
NUP54-209ENST00000510569 CCL8P80075 99 aa2.14□□□□□ -2.07
NUP54-209ENST00000510569 RHOHQ15669 191 aa2.14□□□□□ -2.07
NUP54-209ENST00000510569 Q1T7F1 81 aa2.14□□□□□ -2.07
NUP54-209ENST00000510569 FAM229BQ4G0N7 80 aa2.14□□□□□ -2.07
NUP54-209ENST00000510569 BVES-AS1Q5T3Y7 98 aa2.14□□□□□ -2.07
NUP54-209ENST00000510569 FAM27BQ5VT28 67 aa2.14□□□□□ -2.07
NUP54-209ENST00000510569 BRD3OSQ6XYD6 125 aa2.14□□□□□ -2.07
NUP54-209ENST00000510569 Q8IYB0 196 aa2.14□□□□□ -2.07
NUP54-209ENST00000510569 PATE1Q8WXA2 126 aa2.14□□□□□ -2.07
NUP54-209ENST00000510569 SMIM7Q9BQ49 75 aa2.14□□□□□ -2.07
NUP54-209ENST00000510569 TTTY10Q9BZA0 68 aa2.14□□□□□ -2.07
NUP54-209ENST00000510569 FXYD6Q9H0Q3 95 aa2.14□□□□□ -2.07
NUP54-209ENST00000510569 C14orf132Q9NPU4 83 aa2.14□□□□□ -2.07
NUP54-209ENST00000510569 MRPL35Q9NZE8 188 aaKnown RBP2.14□□□□□ -2.07
NUP54-209ENST00000510569 FAM215AQ9Y5M1 114 aa2.14□□□□□ -2.07
NUP54-209ENST00000510569 CACNA1HO95180 2353 aa2.14□□□□□ -2.07
NUP54-209ENST00000510569 TANC2Q9HCD6 1990 aa2.13□□□□□ -2.07
NUP54-209ENST00000510569 H7C2G1 150 aa2.13□□□□□ -2.07
NUP54-209ENST00000510569 ZZEF1O43149 2961 aa2.13□□□□□ -2.07
NUP54-209ENST00000510569 IGHV3-53P01767 116 aa2.13□□□□□ -2.07
NUP54-209ENST00000510569 RPS27P42677 84 aaKnown RBP2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms