RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 MIAQ16674 131 aa9.98□□□□□ -0.81
RNF4-213ENST00000509388 CHCHD1Q96BP2 118 aaKnown RBP9.98□□□□□ -0.81
RNF4-213ENST00000509388 CDC42SE2Q9NRR3 84 aa9.98□□□□□ -0.81
RNF4-213ENST00000509388 IGKV2D-24A0A075B6R9 120 aa9.97□□□□□ -0.81
RNF4-213ENST00000509388 ENHOQ6UWT2 76 aa9.97□□□□□ -0.81
RNF4-213ENST00000509388 C1orf43Q9BWL3 253 aa9.97□□□□□ -0.81
RNF4-213ENST00000509388 PYGO1Q9Y3Y4 419 aa9.97□□□□□ -0.81
RNF4-213ENST00000509388 COX11Q9Y6N1 276 aa9.97□□□□□ -0.81
RNF4-213ENST00000509388 RYR2Q92736 4967 aa9.96□□□□□ -0.81
RNF4-213ENST00000509388 HSBP1O75506 76 aa9.96□□□□□ -0.82
RNF4-213ENST00000509388 Q6ZN92 141 aa9.96□□□□□ -0.82
RNF4-213ENST00000509388 TOMM6Q96B49 74 aa9.96□□□□□ -0.82
RNF4-213ENST00000509388 URB1-AS1Q96HZ7 61 aa9.96□□□□□ -0.82
RNF4-213ENST00000509388 SCGB3A1Q96QR1 104 aa9.96□□□□□ -0.82
RNF4-213ENST00000509388 PRR34Q9NV39 138 aa9.96□□□□□ -0.82
RNF4-213ENST00000509388 DNAH6Q9C0G6 4158 aa9.96□□□□□ -0.82
RNF4-213ENST00000509388 TRAV8-4A0A0B4J246 113 aa9.95□□□□□ -0.82
RNF4-213ENST00000509388 HBDP02042 147 aa9.95□□□□□ -0.82
RNF4-213ENST00000509388 PAPPA-AS1Q5QFB9 102 aa9.95□□□□□ -0.82
RNF4-213ENST00000509388 Q6ZUT4 128 aa9.95□□□□□ -0.82
RNF4-213ENST00000509388 IGLV10-54A0A075B6I4 117 aa9.94□□□□□ -0.82
RNF4-213ENST00000509388 HIST1H2BKO60814 126 aa9.94□□□□□ -0.82
RNF4-213ENST00000509388 HIST1H2BJP06899 126 aa9.94□□□□□ -0.82
RNF4-213ENST00000509388 HIST1H2BOP23527 126 aa9.94□□□□□ -0.82
RNF4-213ENST00000509388 HIST1H2BBP33778 126 aa9.94□□□□□ -0.82
RNF4-213ENST00000509388 HIST1H2BDP58876 126 aa9.94□□□□□ -0.82
RNF4-213ENST00000509388 HIST1H2BCP62807 126 aa9.94□□□□□ -0.82
RNF4-213ENST00000509388 MRPS36P82909 103 aaKnown RBP9.94□□□□□ -0.82
RNF4-213ENST00000509388 SS18Q15532 418 aa9.94□□□□□ -0.82
RNF4-213ENST00000509388 PMCHL1Q16048 86 aa9.94□□□□□ -0.82
RNF4-213ENST00000509388 HIST2H2BEQ16778 126 aa9.94□□□□□ -0.82
RNF4-213ENST00000509388 RNASE13Q5GAN3 156 aaKnown RBP9.94□□□□□ -0.82
RNF4-213ENST00000509388 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.94□□□□□ -0.82
RNF4-213ENST00000509388 ERASQ7Z444 233 aa9.94□□□□□ -0.82
RNF4-213ENST00000509388 HIST1H2BHQ93079 126 aa9.94□□□□□ -0.82
RNF4-213ENST00000509388 TMEM141Q96I45 108 aa9.94□□□□□ -0.82
RNF4-213ENST00000509388 HIST1H2BNQ99877 126 aa9.94□□□□□ -0.82
RNF4-213ENST00000509388 HIST1H2BMQ99879 126 aa9.94□□□□□ -0.82
RNF4-213ENST00000509388 OPRPNQ99935 248 aaPredicted RBP9.94□□□□□ -0.82
RNF4-213ENST00000509388 VCX2Q9H322 139 aa9.94□□□□□ -0.82
RNF4-213ENST00000509388 SERF1AO75920 110 aa9.93□□□□□ -0.82
RNF4-213ENST00000509388 NPSP0C0P6 89 aa9.93□□□□□ -0.82
RNF4-213ENST00000509388 TEX43Q6ZNM6 134 aa9.93□□□□□ -0.82
RNF4-213ENST00000509388 TIMM17AQ99595 171 aa9.93□□□□□ -0.82
RNF4-213ENST00000509388 KMT2AQ03164 3969 aa9.93□□□□□ -0.82
RNF4-213ENST00000509388 IGLV4-3A0A075B6K6 122 aa9.92□□□□□ -0.82
RNF4-213ENST00000509388 TRAV13-1A0A0B4J241 112 aa9.92□□□□□ -0.82
RNF4-213ENST00000509388 IGIPA6NJ69 53 aa9.92□□□□□ -0.82
RNF4-213ENST00000509388 IFITM10A6NMD0 228 aa9.92□□□□□ -0.82
RNF4-213ENST00000509388 RTL8CO15255 209 aa9.92□□□□□ -0.82
RNF4-213ENST00000509388 LINC00336Q6ZUF6 198 aa9.92□□□□□ -0.82
RNF4-213ENST00000509388 C2orf88Q9BSF0 95 aa9.92□□□□□ -0.82
RNF4-213ENST00000509388 LINC00959A0A1B0GUT2 108 aa9.91□□□□□ -0.82
RNF4-213ENST00000509388 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.91□□□□□ -0.82
RNF4-213ENST00000509388 CCL25O15444 150 aa9.91□□□□□ -0.82
RNF4-213ENST00000509388 PRSS29PA6NIE9 313 aa9.9□□□□□ -0.82
RNF4-213ENST00000509388 ATP5LO75964 103 aa9.9□□□□□ -0.82
RNF4-213ENST00000509388 CHCHD10Q8WYQ3 142 aaPredicted RBP9.9□□□□□ -0.82
RNF4-213ENST00000509388 A0A096LNJ9 63 aa9.89□□□□□ -0.83
RNF4-213ENST00000509388 GAGE12HA6NDE8 117 aa9.89□□□□□ -0.83
RNF4-213ENST00000509388 EREGO14944 169 aa9.89□□□□□ -0.83
RNF4-213ENST00000509388 XCL1P47992 114 aa9.89□□□□□ -0.83
RNF4-213ENST00000509388 NDUFA6P56556 154 aa9.89□□□□□ -0.83
RNF4-213ENST00000509388 Q6ZRN7 208 aaPredicted RBP9.89□□□□□ -0.83
RNF4-213ENST00000509388 FAM19A2Q8N3H0 131 aa9.89□□□□□ -0.83
RNF4-213ENST00000509388 PDZD11Q5EBL8 140 aa9.88□□□□□ -0.83
RNF4-213ENST00000509388 DNAH2Q9P225 4427 aa9.87□□□□□ -0.83
RNF4-213ENST00000509388 TNP2Q05952 138 aa9.87□□□□□ -0.83
RNF4-213ENST00000509388 BAALCQ8WXS3 180 aa9.87□□□□□ -0.83
RNF4-213ENST00000509388 FAM104AQ969W3 186 aa9.87□□□□□ -0.83
RNF4-213ENST00000509388 AMELXQ99217 191 aa9.87□□□□□ -0.83
RNF4-213ENST00000509388 RYR3Q15413 4870 aa9.87□□□□□ -0.83
RNF4-213ENST00000509388 NUPR1O60356 82 aa9.86□□□□□ -0.83
RNF4-213ENST00000509388 LEPROTL1O95214 131 aa9.86□□□□□ -0.83
RNF4-213ENST00000509388 PRSS1P07477 247 aa9.86□□□□□ -0.83
RNF4-213ENST00000509388 LINC00310P59036 64 aa9.86□□□□□ -0.83
RNF4-213ENST00000509388 ZC2HC1BQ5TFG8 222 aa9.86□□□□□ -0.83
RNF4-213ENST00000509388 CD164L2Q6UWJ8 174 aa9.86□□□□□ -0.83
RNF4-213ENST00000509388 PMVKQ15126 192 aa9.85□□□□□ -0.83
RNF4-213ENST00000509388 IFI27L1Q96BM0 104 aa9.85□□□□□ -0.83
RNF4-213ENST00000509388 HSPB8Q9UJY1 196 aa9.85□□□□□ -0.83
RNF4-213ENST00000509388 A0A087WTM6 91 aa9.84□□□□□ -0.83
RNF4-213ENST00000509388 S100A6P06703 90 aa9.84□□□□□ -0.83
RNF4-213ENST00000509388 FABP4P15090 132 aa9.84□□□□□ -0.83
RNF4-213ENST00000509388 SEC11AP67812 179 aa9.84□□□□□ -0.83
RNF4-213ENST00000509388 CFAP161Q6P656 301 aa9.84□□□□□ -0.83
RNF4-213ENST00000509388 MAPKAPK5-AS1Q8N8E1 139 aa9.84□□□□□ -0.83
RNF4-213ENST00000509388 CST9LQ9H4G1 147 aa9.84□□□□□ -0.83
RNF4-213ENST00000509388 LECT2O14960 151 aa9.83□□□□□ -0.84
RNF4-213ENST00000509388 MALP21145 153 aa9.83□□□□□ -0.84
RNF4-213ENST00000509388 UBE2D1P51668 147 aa9.83□□□□□ -0.84
RNF4-213ENST00000509388 FOXI1Q12951 378 aa9.83□□□□□ -0.84
RNF4-213ENST00000509388 COA6Q5JTJ3 125 aaKnown RBP9.83□□□□□ -0.84
RNF4-213ENST00000509388 KRTAP26-1Q6PEX3 210 aa9.83□□□□□ -0.84
RNF4-213ENST00000509388 LINC00173Q6ZV60 143 aa9.83□□□□□ -0.84
RNF4-213ENST00000509388 GEMIN7Q9H840 131 aaKnown RBP9.83□□□□□ -0.84
RNF4-213ENST00000509388 DNAH10Q8IVF4 4471 aa9.82□□□□□ -0.84
RNF4-213ENST00000509388 COX7A2LO14548 114 aa9.82□□□□□ -0.84
RNF4-213ENST00000509388 C14orf177Q52M58 125 aa9.82□□□□□ -0.84
RNF4-213ENST00000509388 LINC00242Q5T6M2 205 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms