RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 NTF3P20783 257 aa4.79□□□□□ -1.64
CCSER1-208ENST00000509109 RPL37AP61513 92 aaKnown RBP4.79□□□□□ -1.64
CCSER1-208ENST00000509109 CNBPP62633 177 aaKnown RBP4.79□□□□□ -1.64
CCSER1-208ENST00000509109 LYZL1Q6UWQ5 148 aa4.79□□□□□ -1.64
CCSER1-208ENST00000509109 C9orf163Q8N9P6 203 aa4.79□□□□□ -1.64
CCSER1-208ENST00000509109 LRP1Q07954 4544 aaKnown RBP4.79□□□□□ -1.64
CCSER1-208ENST00000509109 FAT3Q8TDW7 4589 aa4.78□□□□□ -1.64
CCSER1-208ENST00000509109 PKHD1L1Q86WI1 4243 aa4.78□□□□□ -1.64
CCSER1-208ENST00000509109 IGHV3-64A0A075B6Q5 118 aa4.78□□□□□ -1.64
CCSER1-208ENST00000509109 IFITM10A6NMD0 228 aa4.78□□□□□ -1.64
CCSER1-208ENST00000509109 NCR2O95944 276 aa4.78□□□□□ -1.64
CCSER1-208ENST00000509109 AMMECR1LQ6DCA0 310 aa4.78□□□□□ -1.64
CCSER1-208ENST00000509109 C20orf203Q8NBC4 194 aa4.78□□□□□ -1.64
CCSER1-208ENST00000509109 BORCS7Q96B45 105 aa4.78□□□□□ -1.64
CCSER1-208ENST00000509109 RNF185Q96GF1 192 aa4.78□□□□□ -1.64
CCSER1-208ENST00000509109 PKIGQ9Y2B9 76 aa4.78□□□□□ -1.64
CCSER1-208ENST00000509109 TMEM250H0YL14 139 aa4.77□□□□□ -1.65
CCSER1-208ENST00000509109 H7C423 109 aa4.77□□□□□ -1.65
CCSER1-208ENST00000509109 APCSP02743 223 aa4.77□□□□□ -1.65
CCSER1-208ENST00000509109 KRTAP26-1Q6PEX3 210 aa4.77□□□□□ -1.65
CCSER1-208ENST00000509109 FAM210AQ96ND0 272 aa4.77□□□□□ -1.65
CCSER1-208ENST00000509109 HMCN2Q8NDA2 5059 aa4.76□□□□□ -1.65
CCSER1-208ENST00000509109 IGLV4-60A0A075B6I1 120 aa4.76□□□□□ -1.65
CCSER1-208ENST00000509109 A8MWL6 223 aa4.76□□□□□ -1.65
CCSER1-208ENST00000509109 ZNF25P17030 456 aaPredicted RBP4.76□□□□□ -1.65
CCSER1-208ENST00000509109 KRTAP10-4P60372 401 aaPredicted RBP4.76□□□□□ -1.65
CCSER1-208ENST00000509109 AKAP14Q86UN6 197 aa4.76□□□□□ -1.65
CCSER1-208ENST00000509109 BTF3L4Q96K17 158 aa4.76□□□□□ -1.65
CCSER1-208ENST00000509109 RNASE7Q9H1E1 156 aaKnown RBP4.76□□□□□ -1.65
CCSER1-208ENST00000509109 K7EN84 100 aa4.75□□□□□ -1.65
CCSER1-208ENST00000509109 GATCO43716 136 aaKnown RBP4.75□□□□□ -1.65
CCSER1-208ENST00000509109 CIRBPQ14011 172 aaKnown RBP4.75□□□□□ -1.65
CCSER1-208ENST00000509109 RNASEKQ6P5S7 137 aaKnown RBP4.75□□□□□ -1.65
CCSER1-208ENST00000509109 SDIM1Q6ZPB5 146 aa4.75□□□□□ -1.65
CCSER1-208ENST00000509109 FAM231DQ6ZW35 169 aa4.75□□□□□ -1.65
CCSER1-208ENST00000509109 GATD1Q8NB37 220 aa4.75□□□□□ -1.65
CCSER1-208ENST00000509109 OCC1Q8TAD7 63 aa4.75□□□□□ -1.65
CCSER1-208ENST00000509109 DPH3Q96FX2 82 aa4.75□□□□□ -1.65
CCSER1-208ENST00000509109 TMEM101Q96IK0 257 aa4.75□□□□□ -1.65
CCSER1-208ENST00000509109 TRAV26-2A0A0B4J265 109 aa4.74□□□□□ -1.65
CCSER1-208ENST00000509109 IGKV3OR2-268A0A0C4DH90 116 aa4.74□□□□□ -1.65
CCSER1-208ENST00000509109 SDHAF1A6NFY7 115 aa4.74□□□□□ -1.65
CCSER1-208ENST00000509109 I3L3M4 83 aa4.74□□□□□ -1.65
CCSER1-208ENST00000509109 SMAGPQ0VAQ4 97 aa4.74□□□□□ -1.65
CCSER1-208ENST00000509109 C7orf33Q8WU49 177 aa4.74□□□□□ -1.65
CCSER1-208ENST00000509109 GTSF1Q8WW33 167 aa4.74□□□□□ -1.65
CCSER1-208ENST00000509109 MRAP2Q96G30 205 aa4.74□□□□□ -1.65
CCSER1-208ENST00000509109 GFRA4Q9GZZ7 299 aa4.74□□□□□ -1.65
CCSER1-208ENST00000509109 GVQW2A0A096LPI5 108 aaPredicted RBP4.73□□□□□ -1.65
CCSER1-208ENST00000509109 TRBV6-5A0A0K0K1A5 114 aa4.73□□□□□ -1.65
CCSER1-208ENST00000509109 FAM231BA6NCW3 169 aa4.73□□□□□ -1.65
CCSER1-208ENST00000509109 VCYO14598 125 aa4.73□□□□□ -1.65
CCSER1-208ENST00000509109 NDUFS6O75380 124 aaKnown RBP4.73□□□□□ -1.65
CCSER1-208ENST00000509109 FGF6P10767 208 aa4.73□□□□□ -1.65
CCSER1-208ENST00000509109 PMCHP20382 165 aa4.73□□□□□ -1.65
CCSER1-208ENST00000509109 RPS10P46783 165 aaKnown RBP4.73□□□□□ -1.65
CCSER1-208ENST00000509109 CEBPGP53567 150 aa4.73□□□□□ -1.65
CCSER1-208ENST00000509109 ALKAL2Q6UX46 152 aa4.73□□□□□ -1.65
CCSER1-208ENST00000509109 C15orf56Q8N910 161 aa4.73□□□□□ -1.65
CCSER1-208ENST00000509109 OR5A1Q8NGJ0 315 aa4.73□□□□□ -1.65
CCSER1-208ENST00000509109 SPACA4Q8TDM5 124 aa4.73□□□□□ -1.65
CCSER1-208ENST00000509109 CHCHD10Q8WYQ3 142 aaPredicted RBP4.73□□□□□ -1.65
CCSER1-208ENST00000509109 RPL39LQ96EH5 51 aaKnown RBP4.73□□□□□ -1.65
CCSER1-208ENST00000509109 SMIM7Q9BQ49 75 aa4.73□□□□□ -1.65
CCSER1-208ENST00000509109 EIF5A2Q9GZV4 153 aaKnown RBP4.73□□□□□ -1.65
CCSER1-208ENST00000509109 ST20Q9HBF5 79 aa4.73□□□□□ -1.65
CCSER1-208ENST00000509109 LINC00474Q9P2X8 69 aa4.73□□□□□ -1.65
CCSER1-208ENST00000509109 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.72□□□□□ -1.65
CCSER1-208ENST00000509109 A0A087WYN8 130 aa4.72□□□□□ -1.65
CCSER1-208ENST00000509109 A0A1B0GUT8 65 aa4.72□□□□□ -1.65
CCSER1-208ENST00000509109 IGKV2-29A2NJV5 120 aaPredicted RBP4.72□□□□□ -1.65
CCSER1-208ENST00000509109 PPP1R17O96001 155 aa4.72□□□□□ -1.65
CCSER1-208ENST00000509109 Q6ZRU5 148 aa4.72□□□□□ -1.65
CCSER1-208ENST00000509109 TSKUQ8WUA8 353 aa4.72□□□□□ -1.65
CCSER1-208ENST00000509109 TMEM191AQ9H0A3 160 aa4.72□□□□□ -1.65
CCSER1-208ENST00000509109 IGHV1-58A0A0C4DH39 117 aa4.71□□□□□ -1.66
CCSER1-208ENST00000509109 C7orf77A4D0Y5 90 aa4.71□□□□□ -1.66
CCSER1-208ENST00000509109 ZNF727A8MUV8 499 aa4.71□□□□□ -1.66
CCSER1-208ENST00000509109 HIGD1CA8MV81 97 aa4.71□□□□□ -1.66
CCSER1-208ENST00000509109 PANO1I0J062 215 aa4.71□□□□□ -1.66
CCSER1-208ENST00000509109 PRSS2P07478 247 aa4.71□□□□□ -1.66
CCSER1-208ENST00000509109 CHTF8P0CG12 524 aa4.71□□□□□ -1.66
CCSER1-208ENST00000509109 XCL1P47992 114 aa4.71□□□□□ -1.66
CCSER1-208ENST00000509109 FOXA3P55318 350 aaPredicted RBP4.71□□□□□ -1.66
CCSER1-208ENST00000509109 COX6A2Q02221 97 aa4.71□□□□□ -1.66
CCSER1-208ENST00000509109 SS18Q15532 418 aa4.71□□□□□ -1.66
CCSER1-208ENST00000509109 HIGD2BQ4VC39 106 aa4.71□□□□□ -1.66
CCSER1-208ENST00000509109 LINC01551Q86U37 167 aa4.71□□□□□ -1.66
CCSER1-208ENST00000509109 LYPD6BQ8NI32 183 aa4.71□□□□□ -1.66
CCSER1-208ENST00000509109 TMEM18Q96B42 140 aa4.71□□□□□ -1.66
CCSER1-208ENST00000509109 PLAC8Q9NZF1 115 aa4.71□□□□□ -1.66
CCSER1-208ENST00000509109 IGKV2-24A0A0C4DH68 120 aa4.7□□□□□ -1.66
CCSER1-208ENST00000509109 TRBV27A0A0K0K1C4 114 aa4.7□□□□□ -1.66
CCSER1-208ENST00000509109 CCL25O15444 150 aa4.7□□□□□ -1.66
CCSER1-208ENST00000509109 FCER1GP30273 86 aa4.7□□□□□ -1.66
CCSER1-208ENST00000509109 RIGQ13278 110 aa4.7□□□□□ -1.66
CCSER1-208ENST00000509109 MAJINQ3KP22 176 aa4.7□□□□□ -1.66
CCSER1-208ENST00000509109 MRPL52Q86TS9 123 aaKnown RBP4.7□□□□□ -1.66
CCSER1-208ENST00000509109 ISOC2Q96AB3 205 aa4.7□□□□□ -1.66
CCSER1-208ENST00000509109 CARD19Q96LW7 228 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms