RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 TRBV7-1A0A0A6YYK4 115 aa3.35□□□□□ -1.87
PDLIM5-211ENST00000508531 IGHV3-20A0A0C4DH32 117 aa3.35□□□□□ -1.87
PDLIM5-211ENST00000508531 EPM2AB3EWF7 344 aa3.35□□□□□ -1.87
PDLIM5-211ENST00000508531 SMKR1H3BMG3 65 aa3.35□□□□□ -1.87
PDLIM5-211ENST00000508531 SCRG1O75711 98 aa3.35□□□□□ -1.87
PDLIM5-211ENST00000508531 CGB3P0DN86 165 aa3.35□□□□□ -1.87
PDLIM5-211ENST00000508531 CGB7P0DN87 165 aa3.35□□□□□ -1.87
PDLIM5-211ENST00000508531 RPL27AP46776 148 aaKnown RBP3.35□□□□□ -1.87
PDLIM5-211ENST00000508531 CRIP1P50238 77 aa3.35□□□□□ -1.87
PDLIM5-211ENST00000508531 WT1-ASQ06250 92 aa3.35□□□□□ -1.87
PDLIM5-211ENST00000508531 IL11RAQ14626 422 aa3.35□□□□□ -1.87
PDLIM5-211ENST00000508531 SPANXN1Q5VSR9 72 aa3.35□□□□□ -1.87
PDLIM5-211ENST00000508531 C16orf47Q6ZP98 133 aaPredicted RBP3.35□□□□□ -1.87
PDLIM5-211ENST00000508531 C1orf158Q8N1D5 194 aa3.35□□□□□ -1.87
PDLIM5-211ENST00000508531 EXOC3-AS1Q8N2X6 119 aa3.35□□□□□ -1.87
PDLIM5-211ENST00000508531 LINC00311Q8N616 119 aa3.35□□□□□ -1.87
PDLIM5-211ENST00000508531 RNF182Q8N6D2 247 aa3.35□□□□□ -1.87
PDLIM5-211ENST00000508531 DCANP1Q8TF63 244 aa3.35□□□□□ -1.87
PDLIM5-211ENST00000508531 TMEM243Q9BU79 118 aa3.35□□□□□ -1.87
PDLIM5-211ENST00000508531 RPUSD1Q9UJJ7 312 aaKnown RBP3.35□□□□□ -1.87
PDLIM5-211ENST00000508531 AGRNO00468 2067 aa3.35□□□□□ -1.87
PDLIM5-211ENST00000508531 DYSFO75923 2080 aa3.35□□□□□ -1.87
PDLIM5-211ENST00000508531 ZGRF1Q86YA3 2104 aa3.34□□□□□ -1.87
PDLIM5-211ENST00000508531 HEATR1Q9H583 2144 aaKnown RBP3.34□□□□□ -1.87
PDLIM5-211ENST00000508531 POLEQ07864 2286 aa3.34□□□□□ -1.87
PDLIM5-211ENST00000508531 RBMY1BA6NDE4 496 aaKnown RBP3.34□□□□□ -1.87
PDLIM5-211ENST00000508531 RBMY1EA6NEQ0 496 aaKnown RBP3.34□□□□□ -1.87
PDLIM5-211ENST00000508531 LY6LH3BQJ8 138 aa3.34□□□□□ -1.87
PDLIM5-211ENST00000508531 COX7A2LO14548 114 aa3.34□□□□□ -1.87
PDLIM5-211ENST00000508531 ENSAO43768 121 aaKnown RBP3.34□□□□□ -1.87
PDLIM5-211ENST00000508531 RBMY1DP0C7P1 496 aaKnown RBP3.34□□□□□ -1.87
PDLIM5-211ENST00000508531 RBMY1A1P0DJD3 496 aaKnown RBP3.34□□□□□ -1.87
PDLIM5-211ENST00000508531 RBMY1CP0DJD4 496 aa3.34□□□□□ -1.87
PDLIM5-211ENST00000508531 IGHV4-38-2P0DP08 117 aa3.34□□□□□ -1.87
PDLIM5-211ENST00000508531 CCL3P10147 92 aa3.34□□□□□ -1.87
PDLIM5-211ENST00000508531 ZNF22P17026 224 aaPredicted RBP3.34□□□□□ -1.87
PDLIM5-211ENST00000508531 FXYD7P58549 80 aa3.34□□□□□ -1.87
PDLIM5-211ENST00000508531 RBMY1FQ15415 496 aaKnown RBP3.34□□□□□ -1.87
PDLIM5-211ENST00000508531 RHOHQ15669 191 aa3.34□□□□□ -1.87
PDLIM5-211ENST00000508531 C4orf26Q17RF5 130 aa3.34□□□□□ -1.87
PDLIM5-211ENST00000508531 Q75L30 129 aa3.34□□□□□ -1.87
PDLIM5-211ENST00000508531 NUP37Q8NFH4 326 aa3.34□□□□□ -1.87
PDLIM5-211ENST00000508531 KLF14Q8TD94 323 aaPredicted RBP3.34□□□□□ -1.87
PDLIM5-211ENST00000508531 UPK3BQ9BT76 320 aa3.34□□□□□ -1.87
PDLIM5-211ENST00000508531 CNTRLQ7Z7A1 2325 aa3.33□□□□□ -1.88
PDLIM5-211ENST00000508531 A0A087WW49 117 aa3.33□□□□□ -1.88
PDLIM5-211ENST00000508531 IGHV5-10-1A0A0J9YXX1 117 aa3.33□□□□□ -1.88
PDLIM5-211ENST00000508531 C19orf84I3L1E1 186 aa3.33□□□□□ -1.88
PDLIM5-211ENST00000508531 NBR2O15453 112 aa3.33□□□□□ -1.88
PDLIM5-211ENST00000508531 RPL35AP18077 110 aaKnown RBP3.33□□□□□ -1.88
PDLIM5-211ENST00000508531 MIAQ16674 131 aa3.33□□□□□ -1.88
PDLIM5-211ENST00000508531 C17orf58Q2M2W7 97 aa3.33□□□□□ -1.88
PDLIM5-211ENST00000508531 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
PDLIM5-211ENST00000508531 ZNF826PQ6ZT77 177 aa3.33□□□□□ -1.88
PDLIM5-211ENST00000508531 MUSTN1Q8IVN3 82 aa3.33□□□□□ -1.88
PDLIM5-211ENST00000508531 TMEM61Q8N0U2 210 aa3.33□□□□□ -1.88
PDLIM5-211ENST00000508531 CD177Q8N6Q3 437 aa3.33□□□□□ -1.88
PDLIM5-211ENST00000508531 IMMP1LQ96LU5 166 aa3.33□□□□□ -1.88
PDLIM5-211ENST00000508531 LINC00477Q96M19 166 aa3.33□□□□□ -1.88
PDLIM5-211ENST00000508531 SLC25A15Q9Y619 301 aa3.33□□□□□ -1.88
PDLIM5-211ENST00000508531 RAI1Q7Z5J4 1906 aaPredicted RBP3.32□□□□□ -1.88
PDLIM5-211ENST00000508531 TET2Q6N021 2002 aaPredicted RBP3.32□□□□□ -1.88
PDLIM5-211ENST00000508531 AKAP6Q13023 2319 aa3.32□□□□□ -1.88
PDLIM5-211ENST00000508531 IGLV4-69A0A075B6H9 119 aa3.32□□□□□ -1.88
PDLIM5-211ENST00000508531 IGKV1D-17A0A075B6S4 117 aa3.32□□□□□ -1.88
PDLIM5-211ENST00000508531 TRAV8-3A0A0A6YYJ7 113 aa3.32□□□□□ -1.88
PDLIM5-211ENST00000508531 H7C2G1 150 aa3.32□□□□□ -1.88
PDLIM5-211ENST00000508531 LYZL6O75951 148 aa3.32□□□□□ -1.88
PDLIM5-211ENST00000508531 IGKV1-16P04430 117 aa3.32□□□□□ -1.88
PDLIM5-211ENST00000508531 CD164Q04900 197 aa3.32□□□□□ -1.88
PDLIM5-211ENST00000508531 Q6ZT83 130 aa3.32□□□□□ -1.88
PDLIM5-211ENST00000508531 C3orf56Q8N813 242 aa3.32□□□□□ -1.88
PDLIM5-211ENST00000508531 ITLN2Q8WWU7 325 aaPredicted RBP3.32□□□□□ -1.88
PDLIM5-211ENST00000508531 FAM19A4Q96LR4 140 aa3.32□□□□□ -1.88
PDLIM5-211ENST00000508531 DSCR8Q96T75 97 aa3.32□□□□□ -1.88
PDLIM5-211ENST00000508531 KLK5Q9Y337 293 aaPredicted RBP3.32□□□□□ -1.88
PDLIM5-211ENST00000508531 TRAV7A0A075B6U4 112 aa3.31□□□□□ -1.88
PDLIM5-211ENST00000508531 TRAV41A0A0B4J266 112 aa3.31□□□□□ -1.88
PDLIM5-211ENST00000508531 TRBV6-5A0A0K0K1A5 114 aa3.31□□□□□ -1.88
PDLIM5-211ENST00000508531 IGIPA6NJ69 53 aa3.31□□□□□ -1.88
PDLIM5-211ENST00000508531 LYRM9A8MSI8 78 aa3.31□□□□□ -1.88
PDLIM5-211ENST00000508531 H0YGX0 51 aa3.31□□□□□ -1.88
PDLIM5-211ENST00000508531 I3L3M4 83 aa3.31□□□□□ -1.88
PDLIM5-211ENST00000508531 ZNF80P51504 273 aaPredicted RBP3.31□□□□□ -1.88
PDLIM5-211ENST00000508531 UBE2E1P51965 193 aa3.31□□□□□ -1.88
PDLIM5-211ENST00000508531 KLKP1Q107X0 134 aa3.31□□□□□ -1.88
PDLIM5-211ENST00000508531 DAZ2Q13117 558 aaKnown RBP3.31□□□□□ -1.88
PDLIM5-211ENST00000508531 NSUN5P1Q3KNT7 163 aa3.31□□□□□ -1.88
PDLIM5-211ENST00000508531 ADAMTSL4-AS1Q5T5F5 129 aa3.31□□□□□ -1.88
PDLIM5-211ENST00000508531 CEMP1Q6PRD7 247 aaPredicted RBP3.31□□□□□ -1.88
PDLIM5-211ENST00000508531 LINC00336Q6ZUF6 198 aa3.31□□□□□ -1.88
PDLIM5-211ENST00000508531 DYNAPQ8N1N2 210 aa3.31□□□□□ -1.88
PDLIM5-211ENST00000508531 ZNF491Q8N8L2 437 aa3.31□□□□□ -1.88
PDLIM5-211ENST00000508531 KLHL30-AS1Q8NEE0 82 aa3.31□□□□□ -1.88
PDLIM5-211ENST00000508531 FDCSPQ8NFU4 85 aa3.31□□□□□ -1.88
PDLIM5-211ENST00000508531 AMELXQ99217 191 aa3.31□□□□□ -1.88
PDLIM5-211ENST00000508531 PROK2Q9HC23 129 aa3.31□□□□□ -1.88
PDLIM5-211ENST00000508531 CUBNO60494 3623 aa3.31□□□□□ -1.88
PDLIM5-211ENST00000508531 TRAV21A0A0B4J279 112 aa3.3□□□□□ -1.88
PDLIM5-211ENST00000508531 IGHV1-18A0A0C4DH31 117 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms