RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 GATD1Q8NB37 220 aa5.16□□□□□ -1.58
UBE2D3-222ENST00000508238 C20orf203Q8NBC4 194 aa5.16□□□□□ -1.58
UBE2D3-222ENST00000508238 TMEM243Q9BU79 118 aa5.16□□□□□ -1.58
UBE2D3-222ENST00000508238 A0A1B0GW15 77 aa5.15□□□□□ -1.59
UBE2D3-222ENST00000508238 TCAPO15273 167 aa5.15□□□□□ -1.59
UBE2D3-222ENST00000508238 PRSS1P07477 247 aa5.15□□□□□ -1.59
UBE2D3-222ENST00000508238 CFAP161Q6P656 301 aa5.15□□□□□ -1.59
UBE2D3-222ENST00000508238 LINC01551Q86U37 167 aa5.15□□□□□ -1.59
UBE2D3-222ENST00000508238 BTF3L4Q96K17 158 aa5.15□□□□□ -1.59
UBE2D3-222ENST00000508238 NAT8BQ9UHF3 227 aa5.15□□□□□ -1.59
UBE2D3-222ENST00000508238 LINC00862A6NCI5 91 aa5.14□□□□□ -1.59
UBE2D3-222ENST00000508238 HIGD1CA8MV81 97 aa5.14□□□□□ -1.59
UBE2D3-222ENST00000508238 I3L3M4 83 aa5.14□□□□□ -1.59
UBE2D3-222ENST00000508238 SRP19P09132 144 aaKnown RBP5.14□□□□□ -1.59
UBE2D3-222ENST00000508238 PMCHP20382 165 aa5.14□□□□□ -1.59
UBE2D3-222ENST00000508238 AMTP48728 403 aa5.14□□□□□ -1.59
UBE2D3-222ENST00000508238 AMMECR1LQ6DCA0 310 aa5.14□□□□□ -1.59
UBE2D3-222ENST00000508238 C9orf163Q8N9P6 203 aa5.14□□□□□ -1.59
UBE2D3-222ENST00000508238 CIRBP-AS1Q8TBR5 109 aa5.14□□□□□ -1.59
UBE2D3-222ENST00000508238 MRAP2Q96G30 205 aa5.14□□□□□ -1.59
UBE2D3-222ENST00000508238 TMEM101Q96IK0 257 aa5.14□□□□□ -1.59
UBE2D3-222ENST00000508238 TMEM191AQ9H0A3 160 aa5.14□□□□□ -1.59
UBE2D3-222ENST00000508238 ST20Q9HBF5 79 aa5.14□□□□□ -1.59
UBE2D3-222ENST00000508238 NAT8Q9UHE5 227 aa5.14□□□□□ -1.59
UBE2D3-222ENST00000508238 IGLV4-60A0A075B6I1 120 aa5.13□□□□□ -1.59
UBE2D3-222ENST00000508238 TRAV26-2A0A0B4J265 109 aa5.13□□□□□ -1.59
UBE2D3-222ENST00000508238 TRBV6-5A0A0K0K1A5 114 aa5.13□□□□□ -1.59
UBE2D3-222ENST00000508238 F8W036 122 aa5.13□□□□□ -1.59
UBE2D3-222ENST00000508238 VCYO14598 125 aa5.13□□□□□ -1.59
UBE2D3-222ENST00000508238 PPP1R2P9O14990 202 aa5.13□□□□□ -1.59
UBE2D3-222ENST00000508238 HLA-DQA1P01909 254 aa5.13□□□□□ -1.59
UBE2D3-222ENST00000508238 ZNF25P17030 456 aaPredicted RBP5.13□□□□□ -1.59
UBE2D3-222ENST00000508238 CNBPP62633 177 aaKnown RBP5.13□□□□□ -1.59
UBE2D3-222ENST00000508238 SDIM1Q6ZPB5 146 aa5.13□□□□□ -1.59
UBE2D3-222ENST00000508238 TMEM18Q96B42 140 aa5.13□□□□□ -1.59
UBE2D3-222ENST00000508238 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.12□□□□□ -1.59
UBE2D3-222ENST00000508238 PRYO14603 147 aa5.12□□□□□ -1.59
UBE2D3-222ENST00000508238 CCL25O15444 150 aa5.12□□□□□ -1.59
UBE2D3-222ENST00000508238 APCSP02743 223 aa5.12□□□□□ -1.59
UBE2D3-222ENST00000508238 KRTAP10-4P60372 401 aaPredicted RBP5.12□□□□□ -1.59
UBE2D3-222ENST00000508238 CLPSL2Q6UWE3 100 aa5.12□□□□□ -1.59
UBE2D3-222ENST00000508238 DEFB104AQ8WTQ1 72 aa5.12□□□□□ -1.59
UBE2D3-222ENST00000508238 RPL39LQ96EH5 51 aaKnown RBP5.12□□□□□ -1.59
UBE2D3-222ENST00000508238 KIR2DL4Q99706 377 aa5.12□□□□□ -1.59
UBE2D3-222ENST00000508238 IGLV10-54A0A075B6I4 117 aa5.11□□□□□ -1.59
UBE2D3-222ENST00000508238 SDHAF1A6NFY7 115 aa5.11□□□□□ -1.59
UBE2D3-222ENST00000508238 KRTAP29-1A8MX34 341 aaPredicted RBP5.11□□□□□ -1.59
UBE2D3-222ENST00000508238 PNRC1Q12796 327 aaPredicted RBP5.11□□□□□ -1.59
UBE2D3-222ENST00000508238 CIRBPQ14011 172 aaKnown RBP5.11□□□□□ -1.59
UBE2D3-222ENST00000508238 ADIRFQ15847 76 aa5.11□□□□□ -1.59
UBE2D3-222ENST00000508238 ISOC2Q96AB3 205 aa5.11□□□□□ -1.59
UBE2D3-222ENST00000508238 PKIGQ9Y2B9 76 aa5.11□□□□□ -1.59
UBE2D3-222ENST00000508238 TRBV27A0A0K0K1C4 114 aa5.1□□□□□ -1.59
UBE2D3-222ENST00000508238 A0A1B0GVG6 124 aa5.1□□□□□ -1.59
UBE2D3-222ENST00000508238 SMIM27A0A1W2PRY6 76 aa5.1□□□□□ -1.59
UBE2D3-222ENST00000508238 PPBPP02775 128 aa5.1□□□□□ -1.59
UBE2D3-222ENST00000508238 ESDP10768 282 aa5.1□□□□□ -1.59
UBE2D3-222ENST00000508238 RAB4AP20338 218 aa5.1□□□□□ -1.59
UBE2D3-222ENST00000508238 FCER1GP30273 86 aa5.1□□□□□ -1.59
UBE2D3-222ENST00000508238 POLR2KP53803 58 aaKnown RBP5.1□□□□□ -1.59
UBE2D3-222ENST00000508238 RPL23P62829 140 aaKnown RBP5.1□□□□□ -1.59
UBE2D3-222ENST00000508238 RNASEKQ6P5S7 137 aaKnown RBP5.1□□□□□ -1.59
UBE2D3-222ENST00000508238 NUP35Q8NFH5 326 aa5.1□□□□□ -1.59
UBE2D3-222ENST00000508238 C20orf78Q9BR46 151 aa5.1□□□□□ -1.59
UBE2D3-222ENST00000508238 V9GYV3 84 aa5.1□□□□□ -1.59
UBE2D3-222ENST00000508238 hDV102S1A0JD36 115 aa5.09□□□□□ -1.59
UBE2D3-222ENST00000508238 GAS8-AS1O95177 125 aa5.09□□□□□ -1.59
UBE2D3-222ENST00000508238 MT-ND4LP03901 98 aa5.09□□□□□ -1.59
UBE2D3-222ENST00000508238 FGF6P10767 208 aa5.09□□□□□ -1.59
UBE2D3-222ENST00000508238 CKS2P33552 79 aa5.09□□□□□ -1.59
UBE2D3-222ENST00000508238 SS18Q15532 418 aa5.09□□□□□ -1.59
UBE2D3-222ENST00000508238 DPH3Q96FX2 82 aa5.09□□□□□ -1.59
UBE2D3-222ENST00000508238 RNF185Q96GF1 192 aa5.09□□□□□ -1.59
UBE2D3-222ENST00000508238 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.08□□□□□ -1.6
UBE2D3-222ENST00000508238 IGKV2-29A2NJV5 120 aaPredicted RBP5.08□□□□□ -1.6
UBE2D3-222ENST00000508238 TSHBP01222 138 aa5.08□□□□□ -1.6
UBE2D3-222ENST00000508238 G0S2P27469 103 aa5.08□□□□□ -1.6
UBE2D3-222ENST00000508238 FAM104BQ5XKR9 115 aa5.08□□□□□ -1.6
UBE2D3-222ENST00000508238 ATP5L2Q7Z4Y8 100 aa5.08□□□□□ -1.6
UBE2D3-222ENST00000508238 MRPL52Q86TS9 123 aaKnown RBP5.08□□□□□ -1.6
UBE2D3-222ENST00000508238 C15orf56Q8N910 161 aa5.08□□□□□ -1.6
UBE2D3-222ENST00000508238 OR5A1Q8NGJ0 315 aa5.08□□□□□ -1.6
UBE2D3-222ENST00000508238 CHCHD10Q8WYQ3 142 aaPredicted RBP5.08□□□□□ -1.6
UBE2D3-222ENST00000508238 CSDC2Q9Y534 153 aaKnown RBP5.08□□□□□ -1.6
UBE2D3-222ENST00000508238 TRBV24-1A0A075B6N3 115 aa5.07□□□□□ -1.6
UBE2D3-222ENST00000508238 IGHV3-64A0A075B6Q5 118 aa5.07□□□□□ -1.6
UBE2D3-222ENST00000508238 GVQW2A0A096LPI5 108 aaPredicted RBP5.07□□□□□ -1.6
UBE2D3-222ENST00000508238 C7orf77A4D0Y5 90 aa5.07□□□□□ -1.6
UBE2D3-222ENST00000508238 C9JQL5 133 aa5.07□□□□□ -1.6
UBE2D3-222ENST00000508238 PANO1I0J062 215 aa5.07□□□□□ -1.6
UBE2D3-222ENST00000508238 PHOX2AO14813 284 aa5.07□□□□□ -1.6
UBE2D3-222ENST00000508238 RAB5AP20339 215 aa5.07□□□□□ -1.6
UBE2D3-222ENST00000508238 RPS10P46783 165 aaKnown RBP5.07□□□□□ -1.6
UBE2D3-222ENST00000508238 CAMPP49913 170 aa5.07□□□□□ -1.6
UBE2D3-222ENST00000508238 RPL32P62910 135 aaKnown RBP5.07□□□□□ -1.6
UBE2D3-222ENST00000508238 HBBP68871 147 aa5.07□□□□□ -1.6
UBE2D3-222ENST00000508238 AMN1Q8IY45 258 aa5.07□□□□□ -1.6
UBE2D3-222ENST00000508238 LRP1Q07954 4544 aaKnown RBP5.06□□□□□ -1.6
UBE2D3-222ENST00000508238 C1orf196B1AJZ1 125 aa5.06□□□□□ -1.6
UBE2D3-222ENST00000508238 OXTP01178 125 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms