RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 HHLA3Q9XRX5 114 aa5.05□□□□□ -1.6
NUP54-204ENST00000506098 DEFB131BA0A096LNP1 70 aa5.04□□□□□ -1.6
NUP54-204ENST00000506098 TRAV26-2A0A0B4J265 109 aa5.04□□□□□ -1.6
NUP54-204ENST00000506098 D6R8Y8 96 aa5.04□□□□□ -1.6
NUP54-204ENST00000506098 GAS8-AS1O95177 125 aa5.04□□□□□ -1.6
NUP54-204ENST00000506098 FABP2P12104 132 aa5.04□□□□□ -1.6
NUP54-204ENST00000506098 RHOHQ15669 191 aa5.04□□□□□ -1.6
NUP54-204ENST00000506098 KIAA1644Q3SXP7 199 aa5.04□□□□□ -1.6
NUP54-204ENST00000506098 SLC25A34Q6PIV7 304 aa5.04□□□□□ -1.6
NUP54-204ENST00000506098 ORMDL3Q8N138 153 aa5.04□□□□□ -1.6
NUP54-204ENST00000506098 NEXN-AS1Q8NBZ9 246 aa5.04□□□□□ -1.6
NUP54-204ENST00000506098 VSIG2Q96IQ7 327 aa5.04□□□□□ -1.6
NUP54-204ENST00000506098 PRO0628Q9UI54 55 aa5.04□□□□□ -1.6
NUP54-204ENST00000506098 V9GYY9 64 aa5.04□□□□□ -1.6
NUP54-204ENST00000506098 SMKR1H3BMG3 65 aa5.03□□□□□ -1.6
NUP54-204ENST00000506098 ZNF561-AS1K7EIQ3 104 aa5.03□□□□□ -1.6
NUP54-204ENST00000506098 PAX4O43316 350 aa5.03□□□□□ -1.6
NUP54-204ENST00000506098 P0DMU3 169 aa5.03□□□□□ -1.6
NUP54-204ENST00000506098 FAM231AP0DMU4 169 aa5.03□□□□□ -1.6
NUP54-204ENST00000506098 FAM231CP0DMU5 169 aa5.03□□□□□ -1.6
NUP54-204ENST00000506098 LINC00694P0DN24 101 aa5.03□□□□□ -1.6
NUP54-204ENST00000506098 POLR2KP53803 58 aaKnown RBP5.03□□□□□ -1.6
NUP54-204ENST00000506098 MPV17L2Q567V2 206 aa5.03□□□□□ -1.6
NUP54-204ENST00000506098 PHLDA1Q8WV24 401 aaPredicted RBP5.03□□□□□ -1.6
NUP54-204ENST00000506098 RPL39LQ96EH5 51 aaKnown RBP5.03□□□□□ -1.6
NUP54-204ENST00000506098 PRELID3AQ96N28 172 aa5.03□□□□□ -1.6
NUP54-204ENST00000506098 C20orf78Q9BR46 151 aa5.03□□□□□ -1.6
NUP54-204ENST00000506098 PRADC1Q9BSG0 188 aa5.03□□□□□ -1.6
NUP54-204ENST00000506098 Q9UF83 564 aa5.03□□□□□ -1.6
NUP54-204ENST00000506098 TRBV7-3A0A075B6L6 115 aa5.02□□□□□ -1.61
NUP54-204ENST00000506098 A0A1W2PPM0 123 aa5.02□□□□□ -1.61
NUP54-204ENST00000506098 LCE2BO14633 110 aa5.02□□□□□ -1.61
NUP54-204ENST00000506098 HSBP1O75506 76 aa5.02□□□□□ -1.61
NUP54-204ENST00000506098 NCR2O95944 276 aa5.02□□□□□ -1.61
NUP54-204ENST00000506098 NPYP01303 97 aa5.02□□□□□ -1.61
NUP54-204ENST00000506098 HTN3P15516 51 aa5.02□□□□□ -1.61
NUP54-204ENST00000506098 MALP21145 153 aa5.02□□□□□ -1.61
NUP54-204ENST00000506098 RPL36AP83881 106 aaKnown RBP5.02□□□□□ -1.61
NUP54-204ENST00000506098 FOXI1Q12951 378 aa5.02□□□□□ -1.61
NUP54-204ENST00000506098 Q6ZUT4 128 aa5.02□□□□□ -1.61
NUP54-204ENST00000506098 RPL36ALQ969Q0 106 aaKnown RBP5.02□□□□□ -1.61
NUP54-204ENST00000506098 SPCS1Q9Y6A9 102 aa5.02□□□□□ -1.61
NUP54-204ENST00000506098 IGLV2-18A0A075B6J9 118 aa5.01□□□□□ -1.61
NUP54-204ENST00000506098 A0A096LPF7 62 aa5.01□□□□□ -1.61
NUP54-204ENST00000506098 A0A0J9YY99 117 aa5.01□□□□□ -1.61
NUP54-204ENST00000506098 TRBV27A0A0K0K1C4 114 aa5.01□□□□□ -1.61
NUP54-204ENST00000506098 LOC100131303A0A0U1RQF7 123 aa5.01□□□□□ -1.61
NUP54-204ENST00000506098 SDHAF1A6NFY7 115 aa5.01□□□□□ -1.61
NUP54-204ENST00000506098 GYPEP15421 78 aa5.01□□□□□ -1.61
NUP54-204ENST00000506098 GCSHP23434 173 aa5.01□□□□□ -1.61
NUP54-204ENST00000506098 NDUFV3P56181 108 aaKnown RBP5.01□□□□□ -1.61
NUP54-204ENST00000506098 UBE2D3P61077 147 aa5.01□□□□□ -1.61
NUP54-204ENST00000506098 SUMO2P61956 95 aaKnown RBP5.01□□□□□ -1.61
NUP54-204ENST00000506098 UBE2D2P62837 147 aa5.01□□□□□ -1.61
NUP54-204ENST00000506098 MRPL23Q16540 153 aaKnown RBP5.01□□□□□ -1.61
NUP54-204ENST00000506098 CEMP1Q6PRD7 247 aaPredicted RBP5.01□□□□□ -1.61
NUP54-204ENST00000506098 Q6ZVH6 145 aa5.01□□□□□ -1.61
NUP54-204ENST00000506098 SH2D6Q7Z4S9 175 aa5.01□□□□□ -1.61
NUP54-204ENST00000506098 C15orf53Q8NAA6 179 aa5.01□□□□□ -1.61
NUP54-204ENST00000506098 WWC2-AS2Q96NR7 200 aa5.01□□□□□ -1.61
NUP54-204ENST00000506098 TMEM70Q9BUB7 260 aa5.01□□□□□ -1.61
NUP54-204ENST00000506098 TM2D2Q9BX73 214 aa5.01□□□□□ -1.61
NUP54-204ENST00000506098 ICOSQ9Y6W8 199 aa5.01□□□□□ -1.61
NUP54-204ENST00000506098 NUPR2A6NF83 97 aa5□□□□□ -1.61
NUP54-204ENST00000506098 LINC01546A6NGU7 62 aa5□□□□□ -1.61
NUP54-204ENST00000506098 K7EMI3 77 aa5□□□□□ -1.61
NUP54-204ENST00000506098 VCYO14598 125 aa5□□□□□ -1.61
NUP54-204ENST00000506098 IFITM1P13164 125 aa5□□□□□ -1.61
NUP54-204ENST00000506098 DAZ4Q86SG3 579 aaKnown RBP5□□□□□ -1.61
NUP54-204ENST00000506098 SMIM2Q9BVW6 85 aa5□□□□□ -1.61
NUP54-204ENST00000506098 DAZ3Q9NR90 486 aaKnown RBP5□□□□□ -1.61
NUP54-204ENST00000506098 H3BMG7 143 aa4.99□□□□□ -1.61
NUP54-204ENST00000506098 I3L3M4 83 aa4.99□□□□□ -1.61
NUP54-204ENST00000506098 TIRAPP58753 221 aa4.99□□□□□ -1.61
NUP54-204ENST00000506098 KRTDAPP60985 99 aa4.99□□□□□ -1.61
NUP54-204ENST00000506098 GAGE13Q4V321 117 aa4.99□□□□□ -1.61
NUP54-204ENST00000506098 FAM19A5Q7Z5A7 132 aaPredicted RBP4.99□□□□□ -1.61
NUP54-204ENST00000506098 Q8N8P6 123 aa4.99□□□□□ -1.61
NUP54-204ENST00000506098 MUC7Q8TAX7 377 aa4.99□□□□□ -1.61
NUP54-204ENST00000506098 TMEM101Q96IK0 257 aa4.99□□□□□ -1.61
NUP54-204ENST00000506098 CDIP1Q9H305 208 aa4.99□□□□□ -1.61
NUP54-204ENST00000506098 NXT2Q9NPJ8 142 aaKnown RBP4.99□□□□□ -1.61
NUP54-204ENST00000506098 TENM2Q9NT68 2774 aa4.99□□□□□ -1.61
NUP54-204ENST00000506098 TINCRA0A1B0GVN0 87 aa4.98□□□□□ -1.61
NUP54-204ENST00000506098 IGLL5B9A064 214 aa4.98□□□□□ -1.61
NUP54-204ENST00000506098 C9JAW5 83 aa4.98□□□□□ -1.61
NUP54-204ENST00000506098 SERF1AO75920 110 aa4.98□□□□□ -1.61
NUP54-204ENST00000506098 TSHBP01222 138 aa4.98□□□□□ -1.61
NUP54-204ENST00000506098 C3orf79P0CE67 100 aa4.98□□□□□ -1.61
NUP54-204ENST00000506098 IFI27P40305 119 aaPredicted RBP4.98□□□□□ -1.61
NUP54-204ENST00000506098 TTC32Q5I0X7 151 aa4.98□□□□□ -1.61
NUP54-204ENST00000506098 BAGE3Q86Y29 109 aa4.98□□□□□ -1.61
NUP54-204ENST00000506098 URB1-AS1Q96HZ7 61 aa4.98□□□□□ -1.61
NUP54-204ENST00000506098 KIR2DL4Q99706 377 aa4.98□□□□□ -1.61
NUP54-204ENST00000506098 APLNQ9ULZ1 77 aa4.98□□□□□ -1.61
NUP54-204ENST00000506098 KLK5Q9Y337 293 aaPredicted RBP4.98□□□□□ -1.61
NUP54-204ENST00000506098 STARD9Q9P2P6 4700 aa4.97□□□□□ -1.61
NUP54-204ENST00000506098 LOC389332A0A1B0GUA5 103 aa4.97□□□□□ -1.61
NUP54-204ENST00000506098 SYS1-DBNDD2H3BUS1 97 aa4.97□□□□□ -1.61
NUP54-204ENST00000506098 LINC00310P59036 64 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms