RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 RIGQ13278 110 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 AMMECR1LQ6DCA0 310 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 SUMO4Q6EEV6 95 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 UFSP1Q6NVU6 142 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 RASL11AQ6T310 242 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 LYZL1Q6UWQ5 148 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 NEXN-AS1Q8NBZ9 246 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 NUDT10Q8NFP7 164 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 LYPD6BQ8NI32 183 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 TSKUQ8WUA8 353 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 UBE2WQ96B02 151 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 MRAP2Q96G30 205 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 NUDT11Q96G61 164 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 BTF3L4Q96K17 158 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 PGLYRP4Q96LB8 373 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 TMEM243Q9BU79 118 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 CNFNQ9BYD5 112 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 GFRA4Q9GZZ7 299 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 JPT2Q9H910 190 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 OSTCQ9NRP0 149 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 NAT8BQ9UHF3 227 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 IGLV7-46A0A075B6I9 117 aa1.92□□□□□ -2.1
TCOF1-208ENST00000506063 IGHV3-64A0A075B6Q5 118 aa1.92□□□□□ -2.1
TCOF1-208ENST00000506063 C7orf77A4D0Y5 90 aa1.92□□□□□ -2.1
TCOF1-208ENST00000506063 F8W036 122 aa1.92□□□□□ -2.1
TCOF1-208ENST00000506063 PPP1R2P9O14990 202 aa1.92□□□□□ -2.1
TCOF1-208ENST00000506063 TCAPO15273 167 aa1.92□□□□□ -2.1
TCOF1-208ENST00000506063 NCR2O95944 276 aa1.92□□□□□ -2.1
TCOF1-208ENST00000506063 SRP19P09132 144 aaKnown RBP1.92□□□□□ -2.1
TCOF1-208ENST00000506063 NTF3P20783 257 aa1.92□□□□□ -2.1
TCOF1-208ENST00000506063 FCER1GP30273 86 aa1.92□□□□□ -2.1
TCOF1-208ENST00000506063 HBBP68871 147 aa1.92□□□□□ -2.1
TCOF1-208ENST00000506063 MIAQ16674 131 aa1.92□□□□□ -2.1
TCOF1-208ENST00000506063 NDUFA5Q16718 116 aa1.92□□□□□ -2.1
TCOF1-208ENST00000506063 TMEM241Q24JQ0 296 aa1.92□□□□□ -2.1
TCOF1-208ENST00000506063 MPV17L2Q567V2 206 aa1.92□□□□□ -2.1
TCOF1-208ENST00000506063 RNASEKQ6P5S7 137 aaKnown RBP1.92□□□□□ -2.1
TCOF1-208ENST00000506063 CLPSL2Q6UWE3 100 aa1.92□□□□□ -2.1
TCOF1-208ENST00000506063 ENHOQ6UWT2 76 aa1.92□□□□□ -2.1
TCOF1-208ENST00000506063 ATP5L2Q7Z4Y8 100 aa1.92□□□□□ -2.1
TCOF1-208ENST00000506063 NIT1Q86X76 327 aa1.92□□□□□ -2.1
TCOF1-208ENST00000506063 STPG4Q8N801 248 aa1.92□□□□□ -2.1
TCOF1-208ENST00000506063 OCC1Q8TAD7 63 aa1.92□□□□□ -2.1
TCOF1-208ENST00000506063 ISOC2Q96AB3 205 aa1.92□□□□□ -2.1
TCOF1-208ENST00000506063 TMEM101Q96IK0 257 aa1.92□□□□□ -2.1
TCOF1-208ENST00000506063 KIR2DL4Q99706 377 aa1.92□□□□□ -2.1
TCOF1-208ENST00000506063 NIT2Q9NQR4 276 aa1.92□□□□□ -2.1
TCOF1-208ENST00000506063 KLK12Q9UKR0 248 aa1.92□□□□□ -2.1
TCOF1-208ENST00000506063 PKIGQ9Y2B9 76 aa1.92□□□□□ -2.1
TCOF1-208ENST00000506063 SDHAF1A6NFY7 115 aa1.91□□□□□ -2.1
TCOF1-208ENST00000506063 H0Y9J4 135 aa1.91□□□□□ -2.1
TCOF1-208ENST00000506063 M0QY20 66 aa1.91□□□□□ -2.1
TCOF1-208ENST00000506063 MT-ND4LP03901 98 aa1.91□□□□□ -2.1
TCOF1-208ENST00000506063 ZNF25P17030 456 aaPredicted RBP1.91□□□□□ -2.1
TCOF1-208ENST00000506063 S100PP25815 95 aa1.91□□□□□ -2.1
TCOF1-208ENST00000506063 RPL23P62829 140 aaKnown RBP1.91□□□□□ -2.1
TCOF1-208ENST00000506063 COX6A2Q02221 97 aa1.91□□□□□ -2.1
TCOF1-208ENST00000506063 GAGE6Q13070 117 aa1.91□□□□□ -2.1
TCOF1-208ENST00000506063 IQCJQ1A5X6 159 aa1.91□□□□□ -2.1
TCOF1-208ENST00000506063 MAJINQ3KP22 176 aa1.91□□□□□ -2.1
TCOF1-208ENST00000506063 KRTAP13-3Q3SY46 172 aa1.91□□□□□ -2.1
TCOF1-208ENST00000506063 CLLU1Q5K131 121 aa1.91□□□□□ -2.1
TCOF1-208ENST00000506063 MRPL54Q6P161 138 aaKnown RBP1.91□□□□□ -2.1
TCOF1-208ENST00000506063 UQCC3Q6UW78 93 aa1.91□□□□□ -2.1
TCOF1-208ENST00000506063 COMMD7Q86VX2 200 aa1.91□□□□□ -2.1
TCOF1-208ENST00000506063 OR5A1Q8NGJ0 315 aa1.91□□□□□ -2.1
TCOF1-208ENST00000506063 PRSS3P2Q8NHM4 247 aa1.91□□□□□ -2.1
TCOF1-208ENST00000506063 TMEM18Q96B42 140 aa1.91□□□□□ -2.1
TCOF1-208ENST00000506063 DPH3Q96FX2 82 aa1.91□□□□□ -2.1
TCOF1-208ENST00000506063 TMEM191AQ9H0A3 160 aa1.91□□□□□ -2.1
TCOF1-208ENST00000506063 ST20Q9HBF5 79 aa1.91□□□□□ -2.1
TCOF1-208ENST00000506063 AP5S1Q9NUS5 200 aa1.91□□□□□ -2.1
TCOF1-208ENST00000506063 TMEM242Q9NWH2 141 aa1.91□□□□□ -2.1
TCOF1-208ENST00000506063 V9GYV3 84 aa1.91□□□□□ -2.1
TCOF1-208ENST00000506063 MDN1Q9NU22 5596 aa1.9□□□□□ -2.1
TCOF1-208ENST00000506063 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.9□□□□□ -2.11
TCOF1-208ENST00000506063 A0A096LNI7 61 aa1.9□□□□□ -2.11
TCOF1-208ENST00000506063 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.9□□□□□ -2.11
TCOF1-208ENST00000506063 TRAV8-4A0A0B4J246 113 aa1.9□□□□□ -2.11
TCOF1-208ENST00000506063 IGKV3OR2-268A0A0C4DH90 116 aa1.9□□□□□ -2.11
TCOF1-208ENST00000506063 IGKV2-29A2NJV5 120 aaPredicted RBP1.9□□□□□ -2.11
TCOF1-208ENST00000506063 H7C423 109 aa1.9□□□□□ -2.11
TCOF1-208ENST00000506063 I3L3M4 83 aa1.9□□□□□ -2.11
TCOF1-208ENST00000506063 PPBPP02775 128 aa1.9□□□□□ -2.11
TCOF1-208ENST00000506063 PMCHP20382 165 aa1.9□□□□□ -2.11
TCOF1-208ENST00000506063 CKS2P33552 79 aa1.9□□□□□ -2.11
TCOF1-208ENST00000506063 CAMPP49913 170 aa1.9□□□□□ -2.11
TCOF1-208ENST00000506063 SUMO2P61956 95 aaKnown RBP1.9□□□□□ -2.11
TCOF1-208ENST00000506063 RBX1P62877 108 aa1.9□□□□□ -2.11
TCOF1-208ENST00000506063 REG3AQ06141 175 aa1.9□□□□□ -2.11
TCOF1-208ENST00000506063 AMN1Q8IY45 258 aa1.9□□□□□ -2.11
TCOF1-208ENST00000506063 ORMDL3Q8N138 153 aa1.9□□□□□ -2.11
TCOF1-208ENST00000506063 GATD1Q8NB37 220 aa1.9□□□□□ -2.11
TCOF1-208ENST00000506063 NUP35Q8NFH5 326 aa1.9□□□□□ -2.11
TCOF1-208ENST00000506063 ANAPC16Q96DE5 110 aa1.9□□□□□ -2.11
TCOF1-208ENST00000506063 RPL39LQ96EH5 51 aaKnown RBP1.9□□□□□ -2.11
TCOF1-208ENST00000506063 KRTAP9-3Q9BYQ3 159 aa1.9□□□□□ -2.11
TCOF1-208ENST00000506063 MAP1LC3AQ9H492 121 aa1.9□□□□□ -2.11
TCOF1-208ENST00000506063 Q9UF83 564 aa1.9□□□□□ -2.11
TCOF1-208ENST00000506063 LAMTOR2Q9Y2Q5 125 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms