RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 PRSS2P07478 247 aa4.13□□□□□ -1.75
VCAN-206ENST00000505615 OR5AL1P0C617 328 aa4.13□□□□□ -1.75
VCAN-206ENST00000505615 ARMS2P0C7Q2 107 aa4.13□□□□□ -1.75
VCAN-206ENST00000505615 LINC01547P58512 204 aaPredicted RBP4.13□□□□□ -1.75
VCAN-206ENST00000505615 RPL18AQ02543 176 aaKnown RBP4.13□□□□□ -1.75
VCAN-206ENST00000505615 C1orf137Q5JT78 98 aa4.13□□□□□ -1.75
VCAN-206ENST00000505615 FAM74A1Q5RGS3 127 aa4.13□□□□□ -1.75
VCAN-206ENST00000505615 OR5C1Q8NGR4 320 aa4.13□□□□□ -1.75
VCAN-206ENST00000505615 DEDD2Q8WXF8 326 aa4.13□□□□□ -1.75
VCAN-206ENST00000505615 TRBV25-1A0A075B6N4 114 aa4.12□□□□□ -1.75
VCAN-206ENST00000505615 A0A1B0GUV1 79 aa4.12□□□□□ -1.75
VCAN-206ENST00000505615 A6NDN8 102 aa4.12□□□□□ -1.75
VCAN-206ENST00000505615 E9PLD3 99 aa4.12□□□□□ -1.75
VCAN-206ENST00000505615 TCRAP04437 139 aa4.12□□□□□ -1.75
VCAN-206ENST00000505615 IL15RAQ13261 267 aa4.12□□□□□ -1.75
VCAN-206ENST00000505615 ZNF726P1Q15940 193 aa4.12□□□□□ -1.75
VCAN-206ENST00000505615 ZFP69Q49AA0 526 aa4.12□□□□□ -1.75
VCAN-206ENST00000505615 TMEM97Q5BJF2 176 aa4.12□□□□□ -1.75
VCAN-206ENST00000505615 CBLN2Q8IUK8 224 aa4.12□□□□□ -1.75
VCAN-206ENST00000505615 DERL1Q9BUN8 251 aa4.12□□□□□ -1.75
VCAN-206ENST00000505615 WDR61Q9GZS3 305 aaKnown RBP4.12□□□□□ -1.75
VCAN-206ENST00000505615 KCNIP2Q9NS61 270 aa4.12□□□□□ -1.75
VCAN-206ENST00000505615 TRAV1-1A0A0B4J248 108 aa4.11□□□□□ -1.75
VCAN-206ENST00000505615 GRIFINA4D1Z8 144 aa4.11□□□□□ -1.75
VCAN-206ENST00000505615 B4DEV8 164 aa4.11□□□□□ -1.75
VCAN-206ENST00000505615 KRBOX1C9JBD0 128 aa4.11□□□□□ -1.75
VCAN-206ENST00000505615 M0R381 172 aa4.11□□□□□ -1.75
VCAN-206ENST00000505615 TAS2R45P59539 299 aa4.11□□□□□ -1.75
VCAN-206ENST00000505615 RAB2AP61019 212 aa4.11□□□□□ -1.75
VCAN-206ENST00000505615 FLI1Q01543 452 aaPredicted RBP4.11□□□□□ -1.75
VCAN-206ENST00000505615 Q6ZN92 141 aa4.11□□□□□ -1.75
VCAN-206ENST00000505615 PRNTQ86SH4 94 aa4.11□□□□□ -1.75
VCAN-206ENST00000505615 SLC51BQ86UW2 128 aa4.11□□□□□ -1.75
VCAN-206ENST00000505615 KRTAP11-1Q8IUC1 163 aa4.11□□□□□ -1.75
VCAN-206ENST00000505615 C5orf17Q8NAS9 161 aa4.11□□□□□ -1.75
VCAN-206ENST00000505615 KRTAP4-1Q9BYQ7 146 aa4.11□□□□□ -1.75
VCAN-206ENST00000505615 PHLDA3Q9Y5J5 127 aa4.11□□□□□ -1.75
VCAN-206ENST00000505615 V9GYH0 126 aa4.11□□□□□ -1.75
VCAN-206ENST00000505615 IGHV1-24A0A0C4DH33 117 aa4.1□□□□□ -1.75
VCAN-206ENST00000505615 TINCRA0A1B0GVN0 87 aa4.1□□□□□ -1.75
VCAN-206ENST00000505615 BTCP35070 178 aa4.1□□□□□ -1.75
VCAN-206ENST00000505615 UBE2D1P51668 147 aa4.1□□□□□ -1.75
VCAN-206ENST00000505615 CYCSP99999 105 aaKnown RBP4.1□□□□□ -1.75
VCAN-206ENST00000505615 ZNF56Q15929 161 aa4.1□□□□□ -1.75
VCAN-206ENST00000505615 TPRXLQ17RH7 258 aa4.1□□□□□ -1.75
VCAN-206ENST00000505615 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
VCAN-206ENST00000505615 PHF5AQ7RTV0 110 aaKnown RBP4.1□□□□□ -1.75
VCAN-206ENST00000505615 C11orf52Q96A22 123 aa4.1□□□□□ -1.75
VCAN-206ENST00000505615 LINC00526Q96FQ7 95 aa4.1□□□□□ -1.75
VCAN-206ENST00000505615 CARD19Q96LW7 228 aa4.1□□□□□ -1.75
VCAN-206ENST00000505615 AQP10Q96PS8 301 aa4.1□□□□□ -1.75
VCAN-206ENST00000505615 SDHCQ99643 169 aaPredicted RBP4.1□□□□□ -1.75
VCAN-206ENST00000505615 PKIGQ9Y2B9 76 aa4.1□□□□□ -1.75
VCAN-206ENST00000505615 FABP5P3A8MUU1 101 aa4.09□□□□□ -1.75
VCAN-206ENST00000505615 SNAPINO95295 136 aa4.09□□□□□ -1.75
VCAN-206ENST00000505615 TPT1P13693 172 aaKnown RBP4.09□□□□□ -1.75
VCAN-206ENST00000505615 SULT1A2P50226 295 aa4.09□□□□□ -1.75
VCAN-206ENST00000505615 CRIP1P50238 77 aa4.09□□□□□ -1.75
VCAN-206ENST00000505615 PYDC2Q56P42 97 aa4.09□□□□□ -1.75
VCAN-206ENST00000505615 C9orf116Q5BN46 136 aaPredicted RBP4.09□□□□□ -1.75
VCAN-206ENST00000505615 TRIQKQ629K1 86 aa4.09□□□□□ -1.75
VCAN-206ENST00000505615 CHCHD10Q8WYQ3 142 aaPredicted RBP4.09□□□□□ -1.75
VCAN-206ENST00000505615 MRAP2Q96G30 205 aa4.09□□□□□ -1.75
VCAN-206ENST00000505615 ARL2-SNX15V9GYD0 113 aa4.09□□□□□ -1.75
VCAN-206ENST00000505615 A0A1B0GV72 72 aa4.08□□□□□ -1.76
VCAN-206ENST00000505615 FAM240AA0A1B0GVK7 77 aa4.08□□□□□ -1.76
VCAN-206ENST00000505615 C17orf112F2Z3M2 114 aa4.08□□□□□ -1.76
VCAN-206ENST00000505615 SH2D1AO60880 128 aa4.08□□□□□ -1.76
VCAN-206ENST00000505615 TMBIM6P55061 237 aa4.08□□□□□ -1.76
VCAN-206ENST00000505615 FAM19A5Q7Z5A7 132 aaPredicted RBP4.08□□□□□ -1.76
VCAN-206ENST00000505615 TMEM243Q9BU79 118 aa4.08□□□□□ -1.76
VCAN-206ENST00000505615 MAP1LC3AQ9H492 121 aa4.08□□□□□ -1.76
VCAN-206ENST00000505615 CARHSP1Q9Y2V2 147 aaKnown RBP4.08□□□□□ -1.76
VCAN-206ENST00000505615 LOC107984640A0A0U1RRK4 108 aa4.07□□□□□ -1.76
VCAN-206ENST00000505615 HMGB3O15347 200 aaKnown RBP4.07□□□□□ -1.76
VCAN-206ENST00000505615 ARL14EPLP0DKL9 152 aa4.07□□□□□ -1.76
VCAN-206ENST00000505615 CNPY1Q3B7I2 92 aa4.07□□□□□ -1.76
VCAN-206ENST00000505615 MRPL55Q7Z7F7 128 aaKnown RBP4.07□□□□□ -1.76
VCAN-206ENST00000505615 Q86TA4 180 aa4.07□□□□□ -1.76
VCAN-206ENST00000505615 OR10AG1Q8NH19 301 aa4.07□□□□□ -1.76
VCAN-206ENST00000505615 PGLYRP4Q96LB8 373 aa4.07□□□□□ -1.76
VCAN-206ENST00000505615 RETNLBQ9BQ08 111 aa4.07□□□□□ -1.76
VCAN-206ENST00000505615 RPP21Q9H633 154 aaKnown RBP4.07□□□□□ -1.76
VCAN-206ENST00000505615 EPDR1Q9UM22 224 aa4.07□□□□□ -1.76
VCAN-206ENST00000505615 TMSB15BA0A087X1C1 80 aa4.06□□□□□ -1.76
VCAN-206ENST00000505615 IGKV3OR2-268A0A0C4DH90 116 aa4.06□□□□□ -1.76
VCAN-206ENST00000505615 NAP1L6A6NFF2 107 aa4.06□□□□□ -1.76
VCAN-206ENST00000505615 BCL2P10415 239 aa4.06□□□□□ -1.76
VCAN-206ENST00000505615 SYCNQ0VAF6 134 aa4.06□□□□□ -1.76
VCAN-206ENST00000505615 KIAA1644Q3SXP7 199 aa4.06□□□□□ -1.76
VCAN-206ENST00000505615 STOML3Q8TAV4 291 aa4.06□□□□□ -1.76
VCAN-206ENST00000505615 ZNF471Q9BX82 626 aaPredicted RBP4.06□□□□□ -1.76
VCAN-206ENST00000505615 MED28Q9H204 178 aa4.06□□□□□ -1.76
VCAN-206ENST00000505615 IGHV1-58A0A0C4DH39 117 aa4.05□□□□□ -1.76
VCAN-206ENST00000505615 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.05□□□□□ -1.76
VCAN-206ENST00000505615 UPK1BO75841 260 aa4.05□□□□□ -1.76
VCAN-206ENST00000505615 CRYGAP11844 174 aa4.05□□□□□ -1.76
VCAN-206ENST00000505615 PFN2P35080 140 aa4.05□□□□□ -1.76
VCAN-206ENST00000505615 EIF5AP63241 154 aaKnown RBP4.05□□□□□ -1.76
VCAN-206ENST00000505615 MEF2BQ02080 365 aaPredicted RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms