RNA–Protein interactions for RNA: ENST00000505346.5

SMN2-205, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-205ENST00000505346 ZNF236Q9UL36 1845 aa-1.23□□□□□ -2.61
SMN2-205ENST00000505346 TRBV20-1A0A075B6N2 111 aa-1.23□□□□□ -2.61
SMN2-205ENST00000505346 APOC4-APOC2K7ER74 178 aa-1.23□□□□□ -2.61
SMN2-205ENST00000505346 UBE2G1P62253 170 aa-1.23□□□□□ -2.61
SMN2-205ENST00000505346 SPANXN1Q5VSR9 72 aa-1.23□□□□□ -2.61
SMN2-205ENST00000505346 APOBP04114 4563 aaKnown RBP-1.23□□□□□ -2.61
SMN2-205ENST00000505346 FAM186AA6NE01 2351 aa-1.23□□□□□ -2.61
SMN2-205ENST00000505346 MYO15AQ9UKN7 3530 aa-1.24□□□□□ -2.61
SMN2-205ENST00000505346 DYNC1H1Q14204 4646 aaKnown RBP-1.24□□□□□ -2.61
SMN2-205ENST00000505346 KNL1Q8NG31 2342 aa-1.24□□□□□ -2.61
SMN2-205ENST00000505346 MT1XP80297 61 aa-1.24□□□□□ -2.61
SMN2-205ENST00000505346 DCDP81605 110 aaKnown RBP-1.24□□□□□ -2.61
SMN2-205ENST00000505346 SKA2Q8WVK7 121 aaPredicted RBP-1.24□□□□□ -2.61
SMN2-205ENST00000505346 MAGOHBQ96A72 148 aaKnown RBP-1.24□□□□□ -2.61
SMN2-205ENST00000505346 CENPHQ9H3R5 247 aa-1.24□□□□□ -2.61
SMN2-205ENST00000505346 LRRC37A3O60309 1634 aa-1.25□□□□□ -2.61
SMN2-205ENST00000505346 MT1AP04731 61 aa-1.25□□□□□ -2.61
SMN2-205ENST00000505346 RPL7L1Q6DKI1 246 aaKnown RBP-1.25□□□□□ -2.61
SMN2-205ENST00000505346 SPTSSBQ8NFR3 76 aa-1.25□□□□□ -2.61
SMN2-205ENST00000505346 AGPAT4-IT1Q9H0P7 198 aa-1.25□□□□□ -2.61
SMN2-205ENST00000505346 DMXL1Q9Y485 3027 aa-1.25□□□□□ -2.61
SMN2-205ENST00000505346 PAPPAQ13219 1627 aa-1.26□□□□□ -2.61
SMN2-205ENST00000505346 ADGRG4Q8IZF6 3080 aa-1.26□□□□□ -2.61
SMN2-205ENST00000505346 FAM236AA0A1B0GUQ0 79 aa-1.26□□□□□ -2.61
SMN2-205ENST00000505346 FAM236BA0A1B0GV22 79 aa-1.26□□□□□ -2.61
SMN2-205ENST00000505346 PITX3O75364 302 aa-1.26□□□□□ -2.61
SMN2-205ENST00000505346 SMIM6P0DI80 62 aa-1.26□□□□□ -2.61
SMN2-205ENST00000505346 DDA1Q9BW61 102 aa-1.26□□□□□ -2.61
SMN2-205ENST00000505346 LINC00312Q9Y6C7 94 aa-1.26□□□□□ -2.61
SMN2-205ENST00000505346 BOD1L1Q8NFC6 3051 aa-1.26□□□□□ -2.61
SMN2-205ENST00000505346 ARHGEF10O15013 1369 aa-1.26□□□□□ -2.61
SMN2-205ENST00000505346 DNAJC13O75165 2243 aa-1.27□□□□□ -2.61
SMN2-205ENST00000505346 REV3LO60673 3130 aa-1.27□□□□□ -2.61
SMN2-205ENST00000505346 TRBV6-1A0A0K0K1D8 114 aa-1.27□□□□□ -2.61
SMN2-205ENST00000505346 TSTD3H0UI37 97 aa-1.27□□□□□ -2.61
SMN2-205ENST00000505346 H0YAA0 97 aa-1.27□□□□□ -2.61
SMN2-205ENST00000505346 SPRR1BP22528 89 aa-1.27□□□□□ -2.61
SMN2-205ENST00000505346 CCL18P55774 89 aa-1.27□□□□□ -2.61
SMN2-205ENST00000505346 NCS1P62166 190 aa-1.27□□□□□ -2.61
SMN2-205ENST00000505346 GINS2Q9Y248 185 aa-1.27□□□□□ -2.61
SMN2-205ENST00000505346 V9GYQ6 96 aa-1.27□□□□□ -2.61
SMN2-205ENST00000505346 IQSEC2Q5JU85 1478 aa-1.27□□□□□ -2.61
SMN2-205ENST00000505346 SPENQ96T58 3664 aaKnown RBP-1.28□□□□□ -2.61
SMN2-205ENST00000505346 A6NIN4 97 aa-1.28□□□□□ -2.61
SMN2-205ENST00000505346 IFNA17P01571 189 aa-1.28□□□□□ -2.61
SMN2-205ENST00000505346 S100A7L2Q5SY68 101 aa-1.28□□□□□ -2.61
SMN2-205ENST00000505346 ZFHX4Q86UP3 3567 aa-1.28□□□□□ -2.61
SMN2-205ENST00000505346 CSMD1Q96PZ7 3565 aa-1.28□□□□□ -2.61
SMN2-205ENST00000505346 DNAH9Q9NYC9 4486 aa-1.28□□□□□ -2.62
SMN2-205ENST00000505346 NWD2Q9ULI1 1742 aa-1.29□□□□□ -2.62
SMN2-205ENST00000505346 ADGRB1O14514 1584 aa-1.29□□□□□ -2.62
SMN2-205ENST00000505346 TLN1Q9Y490 2541 aaKnown RBP-1.29□□□□□ -2.62
SMN2-205ENST00000505346 CASKIN1Q8WXD9 1431 aa-1.29□□□□□ -2.62
SMN2-205ENST00000505346 ZNF818PQ6ZRF7 136 aa-1.29□□□□□ -2.62
SMN2-205ENST00000505346 HSPB11Q9Y547 144 aa-1.29□□□□□ -2.62
SMN2-205ENST00000505346 TRIOO75962 3097 aa-1.29□□□□□ -2.62
SMN2-205ENST00000505346 PDE4DIPQ5VU43 2346 aa-1.29□□□□□ -2.62
SMN2-205ENST00000505346 SACSQ9NZJ4 4579 aa-1.3□□□□□ -2.62
SMN2-205ENST00000505346 SPINK4O60575 86 aa-1.3□□□□□ -2.62
SMN2-205ENST00000505346 MT1GP13640 62 aa-1.3□□□□□ -2.62
SMN2-205ENST00000505346 LRRC37A2A6NM11 1700 aa-1.3□□□□□ -2.62
SMN2-205ENST00000505346 MRC1P22897 1456 aa-1.31□□□□□ -2.62
SMN2-205ENST00000505346 M0R135 149 aa-1.31□□□□□ -2.62
SMN2-205ENST00000505346 PPP1R17O96001 155 aa-1.31□□□□□ -2.62
SMN2-205ENST00000505346 IL5P05113 134 aa-1.31□□□□□ -2.62
SMN2-205ENST00000505346 S100A3P33764 101 aa-1.31□□□□□ -2.62
SMN2-205ENST00000505346 CCDC153Q494R4 210 aa-1.31□□□□□ -2.62
SMN2-205ENST00000505346 MT1MQ8N339 61 aa-1.31□□□□□ -2.62
SMN2-205ENST00000505346 SAR1AQ9NR31 198 aa-1.31□□□□□ -2.62
SMN2-205ENST00000505346 ATMQ13315 3056 aa-1.31□□□□□ -2.62
SMN2-205ENST00000505346 WDR7Q9Y4E6 1490 aa-1.31□□□□□ -2.62
SMN2-205ENST00000505346 IGLC6P0CF74 106 aa-1.32□□□□□ -2.62
SMN2-205ENST00000505346 PIGYQ3MUY2 71 aa-1.32□□□□□ -2.62
SMN2-205ENST00000505346 MORN2Q502X0 79 aa-1.32□□□□□ -2.62
SMN2-205ENST00000505346 Q6ZUT4 128 aa-1.32□□□□□ -2.62
SMN2-205ENST00000505346 SMIM15Q7Z3B0 74 aa-1.32□□□□□ -2.62
SMN2-205ENST00000505346 SDF2Q99470 211 aa-1.32□□□□□ -2.62
SMN2-205ENST00000505346 AIF1LQ9BQI0 150 aa-1.32□□□□□ -2.62
SMN2-205ENST00000505346 FXYD6Q9H0Q3 95 aa-1.32□□□□□ -2.62
SMN2-205ENST00000505346 DNAH7Q8WXX0 4024 aa-1.32□□□□□ -2.62
SMN2-205ENST00000505346 DAPK1P53355 1430 aa-1.32□□□□□ -2.62
SMN2-205ENST00000505346 KDM5AP29375 1690 aaKnown RBP-1.32□□□□□ -2.62
SMN2-205ENST00000505346 DOCK1Q14185 1865 aa-1.33□□□□□ -2.62
SMN2-205ENST00000505346 FRYQ5TBA9 3013 aa-1.33□□□□□ -2.62
SMN2-205ENST00000505346 C5orf42Q9H799 3197 aa-1.33□□□□□ -2.62
SMN2-205ENST00000505346 CTXND1A0A1B0GTU2 59 aa-1.33□□□□□ -2.62
SMN2-205ENST00000505346 MT2AP02795 61 aa-1.33□□□□□ -2.62
SMN2-205ENST00000505346 NBEAP1P0C6P0 100 aa-1.33□□□□□ -2.62
SMN2-205ENST00000505346 COX6B1P14854 86 aa-1.33□□□□□ -2.62
SMN2-205ENST00000505346 CBLN1P23435 193 aa-1.33□□□□□ -2.62
SMN2-205ENST00000505346 DEFB1P60022 68 aa-1.33□□□□□ -2.62
SMN2-205ENST00000505346 DEFB135Q30KP9 77 aa-1.33□□□□□ -2.62
SMN2-205ENST00000505346 GOLGA4Q13439 2230 aaKnown RBP-1.34□□□□□ -2.62
SMN2-205ENST00000505346 TRANK1O15050 2925 aa-1.34□□□□□ -2.62
SMN2-205ENST00000505346 H0YJX3 145 aa-1.34□□□□□ -2.62
SMN2-205ENST00000505346 PIPP12273 146 aaPredicted RBP-1.34□□□□□ -2.62
SMN2-205ENST00000505346 RRAS2P62070 204 aaPredicted RBP-1.34□□□□□ -2.62
SMN2-205ENST00000505346 DEFB112Q30KQ8 113 aa-1.34□□□□□ -2.62
SMN2-205ENST00000505346 MMGT1Q8N4V1 131 aa-1.34□□□□□ -2.62
SMN2-205ENST00000505346 SMIM4Q8WVI0 70 aa-1.34□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms