RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 ANKRD17O75179 2603 aaKnown RBP8.56□□□□□ -1.04
UBE3D-206ENST00000505226 IGHV3-53P01767 116 aa8.56□□□□□ -1.04
UBE3D-206ENST00000505226 IGSF10Q6WRI0 2623 aa8.56□□□□□ -1.04
UBE3D-206ENST00000505226 IGLV5-45A0A087WSX0 123 aa8.56□□□□□ -1.04
UBE3D-206ENST00000505226 H3BT86 120 aa8.56□□□□□ -1.04
UBE3D-206ENST00000505226 LINC00694P0DN24 101 aa8.56□□□□□ -1.04
UBE3D-206ENST00000505226 NDUFA1O15239 70 aa8.55□□□□□ -1.04
UBE3D-206ENST00000505226 IFITM1P13164 125 aa8.55□□□□□ -1.04
UBE3D-206ENST00000505226 NF1P21359 2839 aa8.55□□□□□ -1.04
UBE3D-206ENST00000505226 COX6CP09669 75 aa8.55□□□□□ -1.04
UBE3D-206ENST00000505226 SOSTDC1Q6X4U4 206 aa8.55□□□□□ -1.04
UBE3D-206ENST00000505226 Q8N2B8 174 aa8.55□□□□□ -1.04
UBE3D-206ENST00000505226 TIMM17BO60830 172 aa8.55□□□□□ -1.04
UBE3D-206ENST00000505226 ZNF415Q09FC8 603 aa8.55□□□□□ -1.04
UBE3D-206ENST00000505226 LINC01587Q99440 93 aa8.55□□□□□ -1.04
UBE3D-206ENST00000505226 A0A096LNT2 108 aa8.54□□□□□ -1.04
UBE3D-206ENST00000505226 DEFB121Q5J5C9 76 aa8.54□□□□□ -1.04
UBE3D-206ENST00000505226 LINC00242Q5T6M2 205 aa8.54□□□□□ -1.04
UBE3D-206ENST00000505226 Q6Q795 121 aa8.54□□□□□ -1.04
UBE3D-206ENST00000505226 LINC00308Q8TCZ7 52 aa8.54□□□□□ -1.04
UBE3D-206ENST00000505226 Q9H8V8 135 aa8.54□□□□□ -1.04
UBE3D-206ENST00000505226 MYO18BQ8IUG5 2567 aa8.54□□□□□ -1.04
UBE3D-206ENST00000505226 VPREB3Q9UKI3 123 aa8.54□□□□□ -1.04
UBE3D-206ENST00000505226 TIRAPP58753 221 aa8.53□□□□□ -1.04
UBE3D-206ENST00000505226 BEAN1Q3B7T3 259 aa8.53□□□□□ -1.04
UBE3D-206ENST00000505226 MAP6D1Q9H9H5 199 aa8.53□□□□□ -1.04
UBE3D-206ENST00000505226 YAE1D1Q9NRH1 226 aa8.53□□□□□ -1.04
UBE3D-206ENST00000505226 C2CD3Q4AC94 2353 aa8.53□□□□□ -1.04
UBE3D-206ENST00000505226 IGLV5-39A0A0G2JS06 123 aa8.53□□□□□ -1.04
UBE3D-206ENST00000505226 PIK3CD-AS1Q5SR53 167 aa8.53□□□□□ -1.04
UBE3D-206ENST00000505226 LINC01356Q8N9X3 169 aa8.53□□□□□ -1.04
UBE3D-206ENST00000505226 RS1O15537 224 aa8.52□□□□□ -1.05
UBE3D-206ENST00000505226 GAGE12JA6NER3 117 aa8.51□□□□□ -1.05
UBE3D-206ENST00000505226 GAGE7O76087 117 aa8.51□□□□□ -1.05
UBE3D-206ENST00000505226 GAGE12FP0CL80 117 aa8.51□□□□□ -1.05
UBE3D-206ENST00000505226 GAGE12GP0CL81 117 aa8.51□□□□□ -1.05
UBE3D-206ENST00000505226 GAGE12IP0CL82 117 aa8.51□□□□□ -1.05
UBE3D-206ENST00000505226 GAGE4Q13068 117 aa8.51□□□□□ -1.05
UBE3D-206ENST00000505226 SMIM1B2RUZ4 78 aa8.51□□□□□ -1.05
UBE3D-206ENST00000505226 Q6YL49 198 aa8.51□□□□□ -1.05
UBE3D-206ENST00000505226 NTM-AS1Q6ZSK4 140 aa8.51□□□□□ -1.05
UBE3D-206ENST00000505226 DNAJC30Q96LL9 226 aa8.51□□□□□ -1.05
UBE3D-206ENST00000505226 XCL2Q9UBD3 114 aa8.51□□□□□ -1.05
UBE3D-206ENST00000505226 EPG5Q9HCE0 2579 aa8.5□□□□□ -1.05
UBE3D-206ENST00000505226 DGAT2L7PQ6IED9 249 aa8.5□□□□□ -1.05
UBE3D-206ENST00000505226 C22orf24Q9Y442 160 aa8.5□□□□□ -1.05
UBE3D-206ENST00000505226 NOTCH3Q9UM47 2321 aa8.5□□□□□ -1.05
UBE3D-206ENST00000505226 TRAV13-1A0A0B4J241 112 aa8.49□□□□□ -1.05
UBE3D-206ENST00000505226 FAM240AA0A1B0GVK7 77 aa8.49□□□□□ -1.05
UBE3D-206ENST00000505226 SHISA2Q6UWI4 295 aa8.49□□□□□ -1.05
UBE3D-206ENST00000505226 SETXQ7Z333 2677 aaKnown RBP8.49□□□□□ -1.05
UBE3D-206ENST00000505226 SMCR5Q8TEV8 140 aa8.49□□□□□ -1.05
UBE3D-206ENST00000505226 Q96MF0 132 aa8.49□□□□□ -1.05
UBE3D-206ENST00000505226 CHCHD5Q9BSY4 110 aa8.49□□□□□ -1.05
UBE3D-206ENST00000505226 F5H768 121 aa8.48□□□□□ -1.05
UBE3D-206ENST00000505226 CIRBPQ14011 172 aaKnown RBP8.48□□□□□ -1.05
UBE3D-206ENST00000505226 C1orf158Q8N1D5 194 aa8.48□□□□□ -1.05
UBE3D-206ENST00000505226 FAM218AQ96MZ4 157 aa8.48□□□□□ -1.05
UBE3D-206ENST00000505226 PIEZO1Q92508 2521 aa8.48□□□□□ -1.05
UBE3D-206ENST00000505226 WNK1Q9H4A3 2382 aa8.48□□□□□ -1.05
UBE3D-206ENST00000505226 COX7A2LO14548 114 aa8.48□□□□□ -1.05
UBE3D-206ENST00000505226 FSHBP01225 129 aa8.48□□□□□ -1.05
UBE3D-206ENST00000505226 HERVK_113P63121 156 aa8.48□□□□□ -1.05
UBE3D-206ENST00000505226 DEFB114Q30KQ6 69 aa8.48□□□□□ -1.05
UBE3D-206ENST00000505226 INSP01308 110 aa8.48□□□□□ -1.05
UBE3D-206ENST00000505226 TLN2Q9Y4G6 2542 aa8.47□□□□□ -1.05
UBE3D-206ENST00000505226 ABCA12Q86UK0 2595 aa8.47□□□□□ -1.05
UBE3D-206ENST00000505226 ACACBO00763 2458 aa8.47□□□□□ -1.05
UBE3D-206ENST00000505226 TRGV1A0A0A0MS02 117 aa8.47□□□□□ -1.05
UBE3D-206ENST00000505226 MRPL23Q16540 153 aaKnown RBP8.47□□□□□ -1.05
UBE3D-206ENST00000505226 ODF3L2Q3SX64 289 aa8.46□□□□□ -1.05
UBE3D-206ENST00000505226 Q6ZTI0 123 aa8.46□□□□□ -1.05
UBE3D-206ENST00000505226 FAM19A3Q7Z5A8 133 aa8.46□□□□□ -1.05
UBE3D-206ENST00000505226 PTPN13Q12923 2485 aa8.46□□□□□ -1.05
UBE3D-206ENST00000505226 JMJD1CQ15652 2540 aa8.46□□□□□ -1.05
UBE3D-206ENST00000505226 PRIMA1Q86XR5 153 aa8.46□□□□□ -1.06
UBE3D-206ENST00000505226 IL17DQ8TAD2 202 aa8.46□□□□□ -1.06
UBE3D-206ENST00000505226 TRBV7-7A0A0K0K1E9 115 aa8.46□□□□□ -1.06
UBE3D-206ENST00000505226 KHDC1LQ5JSQ8 128 aa8.46□□□□□ -1.06
UBE3D-206ENST00000505226 CDC42SE2Q9NRR3 84 aa8.46□□□□□ -1.06
UBE3D-206ENST00000505226 CACNA1AO00555 2505 aa8.46□□□□□ -1.06
UBE3D-206ENST00000505226 FAM208BQ5VWN6 2430 aa8.45□□□□□ -1.06
UBE3D-206ENST00000505226 J3QLI3 93 aa8.45□□□□□ -1.06
UBE3D-206ENST00000505226 DSCR9P59020 149 aa8.45□□□□□ -1.06
UBE3D-206ENST00000505226 DAZ2Q13117 558 aaKnown RBP8.45□□□□□ -1.06
UBE3D-206ENST00000505226 DAZ4Q86SG3 579 aaKnown RBP8.45□□□□□ -1.06
UBE3D-206ENST00000505226 DAZ3Q9NR90 486 aaKnown RBP8.45□□□□□ -1.06
UBE3D-206ENST00000505226 CR1P17927 2039 aa8.45□□□□□ -1.06
UBE3D-206ENST00000505226 DYNLRB2Q8TF09 96 aa8.45□□□□□ -1.06
UBE3D-206ENST00000505226 MEIG1Q5JSS6 88 aa8.44□□□□□ -1.06
UBE3D-206ENST00000505226 PEMTQ9UBM1 199 aa8.44□□□□□ -1.06
UBE3D-206ENST00000505226 LRRK2Q5S007 2527 aa8.44□□□□□ -1.06
UBE3D-206ENST00000505226 C3orf56Q8N813 242 aa8.44□□□□□ -1.06
UBE3D-206ENST00000505226 C4orf3Q8WVX3 66 aa8.44□□□□□ -1.06
UBE3D-206ENST00000505226 CSDC2Q9Y534 153 aaKnown RBP8.44□□□□□ -1.06
UBE3D-206ENST00000505226 IGHV4-31P0DP07 118 aa8.43□□□□□ -1.06
UBE3D-206ENST00000505226 SETD2Q9BYW2 2564 aaPredicted RBP8.43□□□□□ -1.06
UBE3D-206ENST00000505226 K7EQD1 137 aa8.43□□□□□ -1.06
UBE3D-206ENST00000505226 BAALC-AS2P0C853 105 aa8.43□□□□□ -1.06
UBE3D-206ENST00000505226 Q9HAA7 133 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms