RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 DIRC1Q969H9 104 aa3.63□□□□□ -1.83
GYPB-204ENST00000504951 RPL39LQ96EH5 51 aaKnown RBP3.63□□□□□ -1.83
GYPB-204ENST00000504951 GNG13Q9P2W3 67 aa3.63□□□□□ -1.83
GYPB-204ENST00000504951 CARHSP1Q9Y2V2 147 aaKnown RBP3.63□□□□□ -1.83
GYPB-204ENST00000504951 KRTAP23-1A1A580 65 aa3.62□□□□□ -1.83
GYPB-204ENST00000504951 F2Z2F3 143 aa3.62□□□□□ -1.83
GYPB-204ENST00000504951 UBE2L6O14933 153 aa3.62□□□□□ -1.83
GYPB-204ENST00000504951 BCL2L11O43521 198 aa3.62□□□□□ -1.83
GYPB-204ENST00000504951 IFNA1P01562 189 aa3.62□□□□□ -1.83
GYPB-204ENST00000504951 CTRLP40313 264 aa3.62□□□□□ -1.83
GYPB-204ENST00000504951 RPL13AP40429 203 aaKnown RBP3.62□□□□□ -1.83
GYPB-204ENST00000504951 GNG4P50150 75 aa3.62□□□□□ -1.83
GYPB-204ENST00000504951 RPS20P60866 119 aaKnown RBP3.62□□□□□ -1.83
GYPB-204ENST00000504951 PRR4Q16378 134 aa3.62□□□□□ -1.83
GYPB-204ENST00000504951 C9orf62Q8N4C0 152 aa3.62□□□□□ -1.83
GYPB-204ENST00000504951 PRR26Q8N8Z3 221 aa3.62□□□□□ -1.83
GYPB-204ENST00000504951 CDIP1Q9H305 208 aa3.62□□□□□ -1.83
GYPB-204ENST00000504951 TRAV1-1A0A0B4J248 108 aa3.61□□□□□ -1.83
GYPB-204ENST00000504951 HMSDA8MTL9 139 aa3.61□□□□□ -1.83
GYPB-204ENST00000504951 TRGC1P0CF51 173 aa3.61□□□□□ -1.83
GYPB-204ENST00000504951 FGF6P10767 208 aa3.61□□□□□ -1.83
GYPB-204ENST00000504951 XCL1P47992 114 aa3.61□□□□□ -1.83
GYPB-204ENST00000504951 CTAG1AP78358 180 aa3.61□□□□□ -1.83
GYPB-204ENST00000504951 TWIST1Q15672 202 aa3.61□□□□□ -1.83
GYPB-204ENST00000504951 RNASEKQ6P5S7 137 aaKnown RBP3.61□□□□□ -1.83
GYPB-204ENST00000504951 CNFNQ9BYD5 112 aa3.61□□□□□ -1.83
GYPB-204ENST00000504951 RNASE7Q9H1E1 156 aaKnown RBP3.61□□□□□ -1.83
GYPB-204ENST00000504951 MANBALQ9NQG1 85 aa3.61□□□□□ -1.83
GYPB-204ENST00000504951 LINC00959A0A1B0GUT2 108 aa3.6□□□□□ -1.83
GYPB-204ENST00000504951 A0A1W2PNN7 141 aa3.6□□□□□ -1.83
GYPB-204ENST00000504951 KANTRA0A1W2PQU2 76 aa3.6□□□□□ -1.83
GYPB-204ENST00000504951 K7EN84 100 aa3.6□□□□□ -1.83
GYPB-204ENST00000504951 CCL25O15444 150 aa3.6□□□□□ -1.83
GYPB-204ENST00000504951 KRTAP1-4P0C5Y4 121 aa3.6□□□□□ -1.83
GYPB-204ENST00000504951 MEF2BQ02080 365 aaPredicted RBP3.6□□□□□ -1.83
GYPB-204ENST00000504951 AMMECR1LQ6DCA0 310 aa3.6□□□□□ -1.83
GYPB-204ENST00000504951 MED9Q9NWA0 146 aa3.6□□□□□ -1.83
GYPB-204ENST00000504951 FSIP2Q5CZC0 6907 aa3.59□□□□□ -1.83
GYPB-204ENST00000504951 XKRY2A2RUG3 117 aa3.59□□□□□ -1.83
GYPB-204ENST00000504951 SDHAF1A6NFY7 115 aa3.59□□□□□ -1.83
GYPB-204ENST00000504951 H0Y9J4 135 aa3.59□□□□□ -1.83
GYPB-204ENST00000504951 NCR2O95944 276 aa3.59□□□□□ -1.83
GYPB-204ENST00000504951 TSHBP01222 138 aa3.59□□□□□ -1.83
GYPB-204ENST00000504951 APCSP02743 223 aa3.59□□□□□ -1.83
GYPB-204ENST00000504951 IGLV7-43P04211 117 aa3.59□□□□□ -1.83
GYPB-204ENST00000504951 ESDP10768 282 aa3.59□□□□□ -1.83
GYPB-204ENST00000504951 PTTG1IPP53801 180 aa3.59□□□□□ -1.83
GYPB-204ENST00000504951 RGS21Q2M5E4 152 aa3.59□□□□□ -1.83
GYPB-204ENST00000504951 OR5A1Q8NGJ0 315 aa3.59□□□□□ -1.83
GYPB-204ENST00000504951 OCC1Q8TAD7 63 aa3.59□□□□□ -1.83
GYPB-204ENST00000504951 SMIM12Q96EX1 92 aa3.59□□□□□ -1.83
GYPB-204ENST00000504951 CARD19Q96LW7 228 aa3.59□□□□□ -1.83
GYPB-204ENST00000504951 RPP21Q9H633 154 aaKnown RBP3.59□□□□□ -1.83
GYPB-204ENST00000504951 BATF3Q9NR55 127 aa3.59□□□□□ -1.83
GYPB-204ENST00000504951 IGHV1-58A0A0C4DH39 117 aa3.58□□□□□ -1.84
GYPB-204ENST00000504951 H7C423 109 aa3.58□□□□□ -1.84
GYPB-204ENST00000504951 I3L3M4 83 aa3.58□□□□□ -1.84
GYPB-204ENST00000504951 PDE6DO43924 150 aa3.58□□□□□ -1.84
GYPB-204ENST00000504951 BCL2P10415 239 aa3.58□□□□□ -1.84
GYPB-204ENST00000504951 SYCNQ0VAF6 134 aa3.58□□□□□ -1.84
GYPB-204ENST00000504951 GAGE2BQ13066 116 aa3.58□□□□□ -1.84
GYPB-204ENST00000504951 TSKUQ8WUA8 353 aa3.58□□□□□ -1.84
GYPB-204ENST00000504951 ANAPC16Q96DE5 110 aa3.58□□□□□ -1.84
GYPB-204ENST00000504951 CDC42SE2Q9NRR3 84 aa3.58□□□□□ -1.84
GYPB-204ENST00000504951 TMEM242Q9NWH2 141 aa3.58□□□□□ -1.84
GYPB-204ENST00000504951 IGLV4-69A0A075B6H9 119 aa3.57□□□□□ -1.84
GYPB-204ENST00000504951 TRBV6-5A0A0K0K1A5 114 aa3.57□□□□□ -1.84
GYPB-204ENST00000504951 MT-ND6P03923 174 aa3.57□□□□□ -1.84
GYPB-204ENST00000504951 ZNF25P17030 456 aaPredicted RBP3.57□□□□□ -1.84
GYPB-204ENST00000504951 PMCHP20382 165 aa3.57□□□□□ -1.84
GYPB-204ENST00000504951 CAMPP49913 170 aa3.57□□□□□ -1.84
GYPB-204ENST00000504951 TPRXLQ17RH7 258 aa3.57□□□□□ -1.84
GYPB-204ENST00000504951 RNASE13Q5GAN3 156 aaKnown RBP3.57□□□□□ -1.84
GYPB-204ENST00000504951 CD164L2Q6UWJ8 174 aa3.57□□□□□ -1.84
GYPB-204ENST00000504951 KRTAP11-1Q8IUC1 163 aa3.57□□□□□ -1.84
GYPB-204ENST00000504951 LOC107984640A0A0U1RRK4 108 aa3.56□□□□□ -1.84
GYPB-204ENST00000504951 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.56□□□□□ -1.84
GYPB-204ENST00000504951 ZNF561-AS1K7EIQ3 104 aa3.56□□□□□ -1.84
GYPB-204ENST00000504951 POLR2KP53803 58 aaKnown RBP3.56□□□□□ -1.84
GYPB-204ENST00000504951 EIF5AP63241 154 aaKnown RBP3.56□□□□□ -1.84
GYPB-204ENST00000504951 SS18Q15532 418 aa3.56□□□□□ -1.84
GYPB-204ENST00000504951 C9orf116Q5BN46 136 aaPredicted RBP3.56□□□□□ -1.84
GYPB-204ENST00000504951 C1orf137Q5JT78 98 aa3.56□□□□□ -1.84
GYPB-204ENST00000504951 PHF5AQ7RTV0 110 aaKnown RBP3.56□□□□□ -1.84
GYPB-204ENST00000504951 MRPL52Q86TS9 123 aaKnown RBP3.56□□□□□ -1.84
GYPB-204ENST00000504951 NUP35Q8NFH5 326 aa3.56□□□□□ -1.84
GYPB-204ENST00000504951 MRAP2Q96G30 205 aa3.56□□□□□ -1.84
GYPB-204ENST00000504951 BTF3L4Q96K17 158 aa3.56□□□□□ -1.84
GYPB-204ENST00000504951 OPRPNQ99935 248 aaPredicted RBP3.56□□□□□ -1.84
GYPB-204ENST00000504951 BIN3Q9NQY0 253 aa3.56□□□□□ -1.84
GYPB-204ENST00000504951 FAM168BA1KXE4 195 aa3.55□□□□□ -1.84
GYPB-204ENST00000504951 SMKR1H3BMG3 65 aa3.55□□□□□ -1.84
GYPB-204ENST00000504951 TEX46H3BTG2 121 aa3.55□□□□□ -1.84
GYPB-204ENST00000504951 GATCO43716 136 aaKnown RBP3.55□□□□□ -1.84
GYPB-204ENST00000504951 RAB4AP20338 218 aa3.55□□□□□ -1.84
GYPB-204ENST00000504951 LINC01547P58512 204 aaPredicted RBP3.55□□□□□ -1.84
GYPB-204ENST00000504951 TEX261Q6UWH6 196 aa3.55□□□□□ -1.84
GYPB-204ENST00000504951 C5orf38Q86SI9 138 aa3.55□□□□□ -1.84
GYPB-204ENST00000504951 AMN1Q8IY45 258 aa3.55□□□□□ -1.84
GYPB-204ENST00000504951 FAM104AQ969W3 186 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms