RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 DNAH6Q9C0G6 4158 aa7.14□□□□□ -1.27
TPM3-217ENST00000504663 ATP5LO75964 103 aa7.14□□□□□ -1.27
TPM3-217ENST00000504663 TIRAPP58753 221 aa7.14□□□□□ -1.27
TPM3-217ENST00000504663 MRPL23Q16540 153 aaKnown RBP7.14□□□□□ -1.27
TPM3-217ENST00000504663 LGALS9CQ6DKI2 356 aa7.14□□□□□ -1.27
TPM3-217ENST00000504663 Q6ZUT4 128 aa7.14□□□□□ -1.27
TPM3-217ENST00000504663 ALMS1Q8TCU4 4167 aa7.14□□□□□ -1.27
TPM3-217ENST00000504663 AMELXQ99217 191 aa7.14□□□□□ -1.27
TPM3-217ENST00000504663 TMEM243Q9BU79 118 aa7.14□□□□□ -1.27
TPM3-217ENST00000504663 IGLV4-69A0A075B6H9 119 aa7.13□□□□□ -1.27
TPM3-217ENST00000504663 TRBV25-1A0A075B6N4 114 aa7.13□□□□□ -1.27
TPM3-217ENST00000504663 TRAV12-1A0A0B4J245 112 aa7.13□□□□□ -1.27
TPM3-217ENST00000504663 LINC01549A6NIU2 74 aa7.13□□□□□ -1.27
TPM3-217ENST00000504663 FGF6P10767 208 aa7.13□□□□□ -1.27
TPM3-217ENST00000504663 TEX43Q6ZNM6 134 aa7.13□□□□□ -1.27
TPM3-217ENST00000504663 Q8N3U1 123 aa7.13□□□□□ -1.27
TPM3-217ENST00000504663 TMEM141Q96I45 108 aa7.13□□□□□ -1.27
TPM3-217ENST00000504663 MAP1LC3CQ9BXW4 147 aa7.13□□□□□ -1.27
TPM3-217ENST00000504663 SPANXA1Q9NS26 97 aa7.13□□□□□ -1.27
TPM3-217ENST00000504663 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.12□□□□□ -1.27
TPM3-217ENST00000504663 NPSP0C0P6 89 aa7.12□□□□□ -1.27
TPM3-217ENST00000504663 MRPS36P82909 103 aaKnown RBP7.12□□□□□ -1.27
TPM3-217ENST00000504663 TMEM97Q5BJF2 176 aa7.12□□□□□ -1.27
TPM3-217ENST00000504663 LYPD5Q6UWN5 251 aa7.12□□□□□ -1.27
TPM3-217ENST00000504663 PMCHL2Q9BQD1 86 aa7.12□□□□□ -1.27
TPM3-217ENST00000504663 CSDC2Q9Y534 153 aaKnown RBP7.12□□□□□ -1.27
TPM3-217ENST00000504663 IGLV4-60A0A075B6I1 120 aa7.11□□□□□ -1.27
TPM3-217ENST00000504663 A0A087WX48 190 aa7.11□□□□□ -1.27
TPM3-217ENST00000504663 H7C423 109 aa7.11□□□□□ -1.27
TPM3-217ENST00000504663 G0S2P27469 103 aa7.11□□□□□ -1.27
TPM3-217ENST00000504663 PTTG1IPP53801 180 aa7.11□□□□□ -1.27
TPM3-217ENST00000504663 GAGE6Q13070 117 aa7.11□□□□□ -1.27
TPM3-217ENST00000504663 RNASE13Q5GAN3 156 aaKnown RBP7.11□□□□□ -1.27
TPM3-217ENST00000504663 LELP1Q5T871 98 aa7.11□□□□□ -1.27
TPM3-217ENST00000504663 CST9LQ9H4G1 147 aa7.11□□□□□ -1.27
TPM3-217ENST00000504663 MRPL35Q9NZE8 188 aaKnown RBP7.11□□□□□ -1.27
TPM3-217ENST00000504663 H0Y8G0 127 aa7.1□□□□□ -1.27
TPM3-217ENST00000504663 ESRGQ1W209 222 aa7.1□□□□□ -1.27
TPM3-217ENST00000504663 MAJINQ3KP22 176 aa7.1□□□□□ -1.27
TPM3-217ENST00000504663 MPV17L2Q567V2 206 aa7.1□□□□□ -1.27
TPM3-217ENST00000504663 SH2D6Q7Z4S9 175 aa7.1□□□□□ -1.27
TPM3-217ENST00000504663 ATOH7Q8N100 152 aa7.1□□□□□ -1.27
TPM3-217ENST00000504663 C12orf57Q99622 126 aa7.1□□□□□ -1.27
TPM3-217ENST00000504663 CDC42SE2Q9NRR3 84 aa7.1□□□□□ -1.27
TPM3-217ENST00000504663 LORP23490 312 aaPredicted RBP7.09□□□□□ -1.27
TPM3-217ENST00000504663 PMVKQ15126 192 aa7.09□□□□□ -1.27
TPM3-217ENST00000504663 Q6ZN92 141 aa7.09□□□□□ -1.27
TPM3-217ENST00000504663 C15orf53Q8NAA6 179 aa7.09□□□□□ -1.27
TPM3-217ENST00000504663 APLNQ9ULZ1 77 aa7.09□□□□□ -1.27
TPM3-217ENST00000504663 DNAH10Q8IVF4 4471 aa7.09□□□□□ -1.28
TPM3-217ENST00000504663 A0A1B0GUV1 79 aa7.08□□□□□ -1.28
TPM3-217ENST00000504663 GAGE10A6NGK3 116 aa7.08□□□□□ -1.28
TPM3-217ENST00000504663 C11orf86A6NJI1 115 aa7.08□□□□□ -1.28
TPM3-217ENST00000504663 F8VRH5 84 aa7.08□□□□□ -1.28
TPM3-217ENST00000504663 PRSS1P07477 247 aa7.08□□□□□ -1.28
TPM3-217ENST00000504663 IGLC3P0DOY3 106 aa7.08□□□□□ -1.28
TPM3-217ENST00000504663 ZNF25P17030 456 aaPredicted RBP7.08□□□□□ -1.28
TPM3-217ENST00000504663 UBE2D1P51668 147 aa7.08□□□□□ -1.28
TPM3-217ENST00000504663 RBX1P62877 108 aa7.08□□□□□ -1.28
TPM3-217ENST00000504663 FAM19A3Q7Z5A8 133 aa7.08□□□□□ -1.28
TPM3-217ENST00000504663 WFDC10BQ8IUB3 73 aa7.08□□□□□ -1.28
TPM3-217ENST00000504663 CHCHD5Q9BSY4 110 aa7.08□□□□□ -1.28
TPM3-217ENST00000504663 DNAH2Q9P225 4427 aa7.08□□□□□ -1.28
TPM3-217ENST00000504663 NFE4Q86UQ8 179 aa7.07□□□□□ -1.28
TPM3-217ENST00000504663 ZNF664Q8N3J9 261 aa7.07□□□□□ -1.28
TPM3-217ENST00000504663 CHTOPQ9Y3Y2 248 aaKnown RBP7.07□□□□□ -1.28
TPM3-217ENST00000504663 LINC00588Q9Y4M8 146 aa7.07□□□□□ -1.28
TPM3-217ENST00000504663 TGP01266 2768 aa7.06□□□□□ -1.28
TPM3-217ENST00000504663 A0A0J9YXV3 536 aa7.06□□□□□ -1.28
TPM3-217ENST00000504663 hDV102S1A0JD36 115 aa7.06□□□□□ -1.28
TPM3-217ENST00000504663 C20orf202A1L168 122 aa7.06□□□□□ -1.28
TPM3-217ENST00000504663 UBE2L6O14933 153 aa7.06□□□□□ -1.28
TPM3-217ENST00000504663 DPM2O94777 84 aa7.06□□□□□ -1.28
TPM3-217ENST00000504663 OR5A1Q8NGJ0 315 aa7.06□□□□□ -1.28
TPM3-217ENST00000504663 IGLV5-45A0A087WSX0 123 aa7.05□□□□□ -1.28
TPM3-217ENST00000504663 IGLL5B9A064 214 aa7.05□□□□□ -1.28
TPM3-217ENST00000504663 IGKCP01834 107 aa7.05□□□□□ -1.28
TPM3-217ENST00000504663 ZNF22P17026 224 aaPredicted RBP7.05□□□□□ -1.28
TPM3-217ENST00000504663 VCX2Q9H322 139 aa7.05□□□□□ -1.28
TPM3-217ENST00000504663 MRPS16Q9Y3D3 137 aaKnown RBP7.05□□□□□ -1.28
TPM3-217ENST00000504663 SACSQ9NZJ4 4579 aa7.04□□□□□ -1.28
TPM3-217ENST00000504663 TRAV9-2A0A087WT02 112 aa7.04□□□□□ -1.28
TPM3-217ENST00000504663 COX6A2Q02221 97 aa7.04□□□□□ -1.28
TPM3-217ENST00000504663 LINC00242Q5T6M2 205 aa7.04□□□□□ -1.28
TPM3-217ENST00000504663 AMMECR1LQ6DCA0 310 aa7.04□□□□□ -1.28
TPM3-217ENST00000504663 STPG4Q8N801 248 aa7.04□□□□□ -1.28
TPM3-217ENST00000504663 UPK3BQ9BT76 320 aa7.04□□□□□ -1.28
TPM3-217ENST00000504663 CHAC1Q9BUX1 264 aa7.04□□□□□ -1.28
TPM3-217ENST00000504663 IGKV2D-26A0A0A0MRZ7 120 aa7.03□□□□□ -1.28
TPM3-217ENST00000504663 TINCRA0A1B0GVN0 87 aa7.03□□□□□ -1.28
TPM3-217ENST00000504663 PLNP26678 52 aa7.03□□□□□ -1.28
TPM3-217ENST00000504663 PAPPA-AS1Q5QFB9 102 aa7.03□□□□□ -1.28
TPM3-217ENST00000504663 VAMP8Q9BV40 100 aa7.03□□□□□ -1.28
TPM3-217ENST00000504663 PRR34Q9NV39 138 aa7.03□□□□□ -1.28
TPM3-217ENST00000504663 FAM30AQ9NZY2 134 aa7.03□□□□□ -1.28
TPM3-217ENST00000504663 TP73-AS1Q9UF72 201 aa7.03□□□□□ -1.28
TPM3-217ENST00000504663 PAM16Q9Y3D7 125 aa7.03□□□□□ -1.28
TPM3-217ENST00000504663 NUPR2A6NF83 97 aa7.02□□□□□ -1.29
TPM3-217ENST00000504663 DNAH10OSP0CZ25 163 aa7.02□□□□□ -1.29
TPM3-217ENST00000504663 SMAGPQ0VAQ4 97 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms