RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 DGAT2L7PQ6IED9 249 aa9.21□□□□□ -0.94
HOXC9-202ENST00000504557 CIRBP-AS1Q8TBR5 109 aa9.21□□□□□ -0.94
HOXC9-202ENST00000504557 KIR2DL4Q99706 377 aa9.21□□□□□ -0.94
HOXC9-202ENST00000504557 F8W036 122 aa9.2□□□□□ -0.94
HOXC9-202ENST00000504557 CCL25O15444 150 aa9.2□□□□□ -0.94
HOXC9-202ENST00000504557 S100A8P05109 93 aa9.2□□□□□ -0.94
HOXC9-202ENST00000504557 C15orf56Q8N910 161 aa9.2□□□□□ -0.94
HOXC9-202ENST00000504557 C9orf163Q8N9P6 203 aa9.2□□□□□ -0.94
HOXC9-202ENST00000504557 VPS13BQ7Z7G8 4022 aa9.2□□□□□ -0.94
HOXC9-202ENST00000504557 LINC00959A0A1B0GUT2 108 aa9.19□□□□□ -0.94
HOXC9-202ENST00000504557 PPP1R2P9O14990 202 aa9.19□□□□□ -0.94
HOXC9-202ENST00000504557 TNFRSF6BO95407 300 aa9.19□□□□□ -0.94
HOXC9-202ENST00000504557 PLA2G1BP04054 148 aaKnown RBP9.19□□□□□ -0.94
HOXC9-202ENST00000504557 CFAP161Q6P656 301 aa9.19□□□□□ -0.94
HOXC9-202ENST00000504557 DPH3Q96FX2 82 aa9.19□□□□□ -0.94
HOXC9-202ENST00000504557 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.18□□□□□ -0.94
HOXC9-202ENST00000504557 A0A1B0GXF2 115 aa9.18□□□□□ -0.94
HOXC9-202ENST00000504557 LINC00862A6NCI5 91 aa9.18□□□□□ -0.94
HOXC9-202ENST00000504557 NPYP01303 97 aa9.18□□□□□ -0.94
HOXC9-202ENST00000504557 SS18Q15532 418 aa9.18□□□□□ -0.94
HOXC9-202ENST00000504557 ZNF664Q8N3J9 261 aa9.18□□□□□ -0.94
HOXC9-202ENST00000504557 CDC42SE2Q9NRR3 84 aa9.18□□□□□ -0.94
HOXC9-202ENST00000504557 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.18□□□□□ -0.94
HOXC9-202ENST00000504557 IGHV3-64A0A075B6Q5 118 aa9.17□□□□□ -0.94
HOXC9-202ENST00000504557 PANO1I0J062 215 aa9.17□□□□□ -0.94
HOXC9-202ENST00000504557 MT-ND4LP03901 98 aa9.17□□□□□ -0.94
HOXC9-202ENST00000504557 SLPIP03973 132 aa9.17□□□□□ -0.94
HOXC9-202ENST00000504557 FOXI1Q12951 378 aa9.17□□□□□ -0.94
HOXC9-202ENST00000504557 CLLU1Q5K131 121 aa9.17□□□□□ -0.94
HOXC9-202ENST00000504557 MRPL52Q86TS9 123 aaKnown RBP9.17□□□□□ -0.94
HOXC9-202ENST00000504557 SRRM2Q9UQ35 2752 aaKnown RBP9.16□□□□□ -0.94
HOXC9-202ENST00000504557 TCAPO15273 167 aa9.16□□□□□ -0.94
HOXC9-202ENST00000504557 CHTF8P0CG12 524 aa9.16□□□□□ -0.94
HOXC9-202ENST00000504557 CNBPP62633 177 aaKnown RBP9.16□□□□□ -0.94
HOXC9-202ENST00000504557 PNRC1Q12796 327 aaPredicted RBP9.16□□□□□ -0.94
HOXC9-202ENST00000504557 LINC00526Q96FQ7 95 aa9.16□□□□□ -0.94
HOXC9-202ENST00000504557 C20orf78Q9BR46 151 aa9.16□□□□□ -0.94
HOXC9-202ENST00000504557 SMIM2Q9BVW6 85 aa9.16□□□□□ -0.94
HOXC9-202ENST00000504557 UBE2D4Q9Y2X8 147 aa9.16□□□□□ -0.94
HOXC9-202ENST00000504557 TRAV13-1A0A0B4J241 112 aa9.15□□□□□ -0.94
HOXC9-202ENST00000504557 RPL39P62891 51 aaKnown RBP9.15□□□□□ -0.94
HOXC9-202ENST00000504557 IFITM2Q01629 132 aa9.15□□□□□ -0.94
HOXC9-202ENST00000504557 SDIM1Q6ZPB5 146 aa9.15□□□□□ -0.94
HOXC9-202ENST00000504557 Q6ZUT4 128 aa9.15□□□□□ -0.94
HOXC9-202ENST00000504557 ANAPC16Q96DE5 110 aa9.15□□□□□ -0.94
HOXC9-202ENST00000504557 TRBV24-1A0A075B6N3 115 aa9.14□□□□□ -0.95
HOXC9-202ENST00000504557 SMAGPQ0VAQ4 97 aa9.14□□□□□ -0.95
HOXC9-202ENST00000504557 ATP5L2Q7Z4Y8 100 aa9.14□□□□□ -0.95
HOXC9-202ENST00000504557 ORMDL3Q8N138 153 aa9.14□□□□□ -0.95
HOXC9-202ENST00000504557 TMEM18Q96B42 140 aa9.14□□□□□ -0.95
HOXC9-202ENST00000504557 PRELID3AQ96N28 172 aa9.14□□□□□ -0.95
HOXC9-202ENST00000504557 LOC389332A0A1B0GUA5 103 aa9.13□□□□□ -0.95
HOXC9-202ENST00000504557 TMEM136Q6ZRR5 245 aa9.13□□□□□ -0.95
HOXC9-202ENST00000504557 GVQW2A0A096LPI5 108 aaPredicted RBP9.12□□□□□ -0.95
HOXC9-202ENST00000504557 IGKV2-24A0A0C4DH68 120 aa9.12□□□□□ -0.95
HOXC9-202ENST00000504557 PPBPP02775 128 aa9.12□□□□□ -0.95
HOXC9-202ENST00000504557 MALP21145 153 aa9.12□□□□□ -0.95
HOXC9-202ENST00000504557 COX6A2Q02221 97 aa9.12□□□□□ -0.95
HOXC9-202ENST00000504557 CD164L2Q6UWJ8 174 aa9.12□□□□□ -0.95
HOXC9-202ENST00000504557 OPRPNQ99935 248 aaPredicted RBP9.12□□□□□ -0.95
HOXC9-202ENST00000504557 IGHV1-58A0A0C4DH39 117 aa9.11□□□□□ -0.95
HOXC9-202ENST00000504557 ADCYAP1P18509 176 aa9.11□□□□□ -0.95
HOXC9-202ENST00000504557 RAB5AP20339 215 aa9.11□□□□□ -0.95
HOXC9-202ENST00000504557 RPL37AP61513 92 aaKnown RBP9.11□□□□□ -0.95
HOXC9-202ENST00000504557 C1orf196B1AJZ1 125 aa9.1□□□□□ -0.95
HOXC9-202ENST00000504557 ZNF561-AS1K7EIQ3 104 aa9.1□□□□□ -0.95
HOXC9-202ENST00000504557 RPL32P62910 135 aaKnown RBP9.1□□□□□ -0.95
HOXC9-202ENST00000504557 C5orf38Q86SI9 138 aa9.1□□□□□ -0.95
HOXC9-202ENST00000504557 PRSS3P2Q8NHM4 247 aa9.1□□□□□ -0.95
HOXC9-202ENST00000504557 CSDC2Q9Y534 153 aaKnown RBP9.1□□□□□ -0.95
HOXC9-202ENST00000504557 TMEM218A2RU14 115 aa9.09□□□□□ -0.95
HOXC9-202ENST00000504557 COX7A2LO14548 114 aa9.09□□□□□ -0.95
HOXC9-202ENST00000504557 PHOX2AO14813 284 aa9.09□□□□□ -0.95
HOXC9-202ENST00000504557 MAJINQ3KP22 176 aa9.09□□□□□ -0.95
HOXC9-202ENST00000504557 COMMD7Q86VX2 200 aa9.09□□□□□ -0.95
HOXC9-202ENST00000504557 TIMM21Q9BVV7 248 aa9.09□□□□□ -0.95
HOXC9-202ENST00000504557 MAP1LC3AQ9H492 121 aa9.09□□□□□ -0.95
HOXC9-202ENST00000504557 DMBT1Q9UGM3 2413 aaPredicted RBP9.08□□□□□ -0.96
HOXC9-202ENST00000504557 A0A087WYN8 130 aa9.08□□□□□ -0.96
HOXC9-202ENST00000504557 J3QL48 77 aa9.08□□□□□ -0.96
HOXC9-202ENST00000504557 UQCC3Q6UW78 93 aa9.08□□□□□ -0.96
HOXC9-202ENST00000504557 CARD19Q96LW7 228 aa9.08□□□□□ -0.96
HOXC9-202ENST00000504557 CTDSP1Q9GZU7 261 aa9.08□□□□□ -0.96
HOXC9-202ENST00000504557 SPANXA1Q9NS26 97 aa9.08□□□□□ -0.96
HOXC9-202ENST00000504557 IFITM10A6NMD0 228 aa9.07□□□□□ -0.96
HOXC9-202ENST00000504557 SPACA4Q8TDM5 124 aa9.07□□□□□ -0.96
HOXC9-202ENST00000504557 IGLV4-69A0A075B6H9 119 aa9.06□□□□□ -0.96
HOXC9-202ENST00000504557 A0A096LNI7 61 aa9.06□□□□□ -0.96
HOXC9-202ENST00000504557 IFI27P40305 119 aaPredicted RBP9.06□□□□□ -0.96
HOXC9-202ENST00000504557 KRTAP10-4P60372 401 aaPredicted RBP9.06□□□□□ -0.96
HOXC9-202ENST00000504557 SYCNQ0VAF6 134 aa9.06□□□□□ -0.96
HOXC9-202ENST00000504557 KIAA1644Q3SXP7 199 aa9.06□□□□□ -0.96
HOXC9-202ENST00000504557 CIRBPQ14011 172 aaKnown RBP9.05□□□□□ -0.96
HOXC9-202ENST00000504557 FAM104AQ969W3 186 aa9.05□□□□□ -0.96
HOXC9-202ENST00000504557 STPG4Q8N801 248 aa9.04□□□□□ -0.96
HOXC9-202ENST00000504557 CAMK2N2Q96S95 79 aa9.04□□□□□ -0.96
HOXC9-202ENST00000504557 LAMTOR2Q9Y2Q5 125 aa9.04□□□□□ -0.96
HOXC9-202ENST00000504557 MYCBP2O75592 4640 aa9.04□□□□□ -0.96
HOXC9-202ENST00000504557 APOMO95445 188 aa9.03□□□□□ -0.96
HOXC9-202ENST00000504557 SPAG11BQ08648 103 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms