RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 NBEAL2Q6ZNJ1 2754 aa5.59□□□□□ -1.52
NEDD9-208ENST00000504387 CHD6Q8TD26 2715 aa5.58□□□□□ -1.52
NEDD9-208ENST00000504387 IGHV4-30-2A0A087WSY4 118 aa5.58□□□□□ -1.52
NEDD9-208ENST00000504387 IGHV1-58A0A0C4DH39 117 aa5.58□□□□□ -1.52
NEDD9-208ENST00000504387 LST1O00453 97 aa5.58□□□□□ -1.52
NEDD9-208ENST00000504387 ATP5G1P05496 136 aa5.58□□□□□ -1.52
NEDD9-208ENST00000504387 RNASE1P07998 156 aaKnown RBP5.58□□□□□ -1.52
NEDD9-208ENST00000504387 COX6A2Q02221 97 aa5.58□□□□□ -1.52
NEDD9-208ENST00000504387 LINC00467Q9BRT7 94 aa5.58□□□□□ -1.52
NEDD9-208ENST00000504387 CYSTM1Q9H1C7 97 aa5.58□□□□□ -1.52
NEDD9-208ENST00000504387 LENEPQ9Y5L5 61 aa5.58□□□□□ -1.52
NEDD9-208ENST00000504387 TINCRA0A1B0GVN0 87 aa5.58□□□□□ -1.52
NEDD9-208ENST00000504387 MIAQ16674 131 aa5.58□□□□□ -1.52
NEDD9-208ENST00000504387 CITED2Q99967 270 aaPredicted RBP5.58□□□□□ -1.52
NEDD9-208ENST00000504387 C11orf68Q9H3H3 251 aaKnown RBP5.58□□□□□ -1.52
NEDD9-208ENST00000504387 IGHV1OR15-1A0A075B7D0 117 aa5.57□□□□□ -1.52
NEDD9-208ENST00000504387 NDUFA4O00483 81 aa5.57□□□□□ -1.52
NEDD9-208ENST00000504387 IGHV4-59P01825 116 aa5.57□□□□□ -1.52
NEDD9-208ENST00000504387 IGHG2P01859 326 aa5.57□□□□□ -1.52
NEDD9-208ENST00000504387 CFHR3Q02985 330 aa5.57□□□□□ -1.52
NEDD9-208ENST00000504387 VSIG2Q96IQ7 327 aa5.57□□□□□ -1.52
NEDD9-208ENST00000504387 KIR2DL5BQ8NHK3 375 aa5.57□□□□□ -1.52
NEDD9-208ENST00000504387 NF1P21359 2839 aa5.57□□□□□ -1.52
NEDD9-208ENST00000504387 A0A1W2PRX2 142 aa5.57□□□□□ -1.52
NEDD9-208ENST00000504387 KLLNB2CW77 178 aa5.57□□□□□ -1.52
NEDD9-208ENST00000504387 SLPIP03973 132 aa5.57□□□□□ -1.52
NEDD9-208ENST00000504387 PRIMA1Q86XR5 153 aa5.57□□□□□ -1.52
NEDD9-208ENST00000504387 FAM218AQ96MZ4 157 aa5.57□□□□□ -1.52
NEDD9-208ENST00000504387 H3BT86 120 aa5.56□□□□□ -1.52
NEDD9-208ENST00000504387 UCNP55089 124 aa5.56□□□□□ -1.52
NEDD9-208ENST00000504387 FBXL19-AS1Q494R0 122 aa5.56□□□□□ -1.52
NEDD9-208ENST00000504387 C9orf129Q5T035 196 aaKnown RBP5.56□□□□□ -1.52
NEDD9-208ENST00000504387 WFDC9Q8NEX5 89 aa5.56□□□□□ -1.52
NEDD9-208ENST00000504387 C14orf132Q9NPU4 83 aa5.56□□□□□ -1.52
NEDD9-208ENST00000504387 FAM223BA6NKX1 122 aa5.56□□□□□ -1.52
NEDD9-208ENST00000504387 TIRAPP58753 221 aa5.56□□□□□ -1.52
NEDD9-208ENST00000504387 SNRPD3P62318 126 aaKnown RBP5.56□□□□□ -1.52
NEDD9-208ENST00000504387 Q6Q795 121 aa5.56□□□□□ -1.52
NEDD9-208ENST00000504387 FAM223AQ8IWN6 122 aa5.56□□□□□ -1.52
NEDD9-208ENST00000504387 RBMY1A1P0DJD3 496 aaKnown RBP5.55□□□□□ -1.52
NEDD9-208ENST00000504387 RBMY1CP0DJD4 496 aa5.55□□□□□ -1.52
NEDD9-208ENST00000504387 RBMY1FQ15415 496 aaKnown RBP5.55□□□□□ -1.52
NEDD9-208ENST00000504387 SOSTDC1Q6X4U4 206 aa5.55□□□□□ -1.52
NEDD9-208ENST00000504387 FAM19A5Q7Z5A7 132 aaPredicted RBP5.55□□□□□ -1.52
NEDD9-208ENST00000504387 FAM104AQ969W3 186 aa5.55□□□□□ -1.52
NEDD9-208ENST00000504387 AVPP01185 164 aa5.55□□□□□ -1.52
NEDD9-208ENST00000504387 HIST1H4AP62805 103 aaKnown RBP5.55□□□□□ -1.52
NEDD9-208ENST00000504387 DCANP1Q8TF63 244 aa5.55□□□□□ -1.52
NEDD9-208ENST00000504387 DSCR8Q96T75 97 aa5.55□□□□□ -1.52
NEDD9-208ENST00000504387 HIVEP2P31629 2446 aa5.55□□□□□ -1.52
NEDD9-208ENST00000504387 CIRBPQ14011 172 aaKnown RBP5.55□□□□□ -1.52
NEDD9-208ENST00000504387 C3orf22Q8N5N4 141 aa5.55□□□□□ -1.52
NEDD9-208ENST00000504387 LINC00308Q8TCZ7 52 aa5.55□□□□□ -1.52
NEDD9-208ENST00000504387 CSDC2Q9Y534 153 aaKnown RBP5.55□□□□□ -1.52
NEDD9-208ENST00000504387 TEX15Q9BXT5 2789 aa5.55□□□□□ -1.52
NEDD9-208ENST00000504387 DEFB131AP59861 70 aa5.54□□□□□ -1.52
NEDD9-208ENST00000504387 DEFB112Q30KQ8 113 aa5.54□□□□□ -1.52
NEDD9-208ENST00000504387 APRG1Q8IVJ8 170 aa5.54□□□□□ -1.52
NEDD9-208ENST00000504387 OR13C6PQ8NH95 151 aa5.54□□□□□ -1.52
NEDD9-208ENST00000504387 FAM19A4Q96LR4 140 aa5.54□□□□□ -1.52
NEDD9-208ENST00000504387 UBE2E2Q96LR5 201 aa5.54□□□□□ -1.52
NEDD9-208ENST00000504387 DOPEY1Q5JWR5 2465 aa5.54□□□□□ -1.52
NEDD9-208ENST00000504387 A0A1B0GX51 115 aa5.54□□□□□ -1.52
NEDD9-208ENST00000504387 MRPS36P82909 103 aaKnown RBP5.54□□□□□ -1.52
NEDD9-208ENST00000504387 RNF152Q8N8N0 203 aa5.54□□□□□ -1.52
NEDD9-208ENST00000504387 MXRA5Q9NR99 2828 aa5.54□□□□□ -1.52
NEDD9-208ENST00000504387 TRBV6-5A0A0K0K1A5 114 aa5.53□□□□□ -1.52
NEDD9-208ENST00000504387 MSMBP08118 114 aa5.53□□□□□ -1.52
NEDD9-208ENST00000504387 PFN2P35080 140 aa5.53□□□□□ -1.52
NEDD9-208ENST00000504387 C9orf85Q96MD7 179 aa5.53□□□□□ -1.52
NEDD9-208ENST00000504387 A0A0J9YX75 114 aa5.53□□□□□ -1.52
NEDD9-208ENST00000504387 PRB1P04280 392 aa5.53□□□□□ -1.52
NEDD9-208ENST00000504387 MED14OSP0DP75 135 aa5.53□□□□□ -1.52
NEDD9-208ENST00000504387 USMG5Q96IX5 58 aa5.53□□□□□ -1.52
NEDD9-208ENST00000504387 TMEM126AQ9H061 195 aa5.53□□□□□ -1.52
NEDD9-208ENST00000504387 NCR3O14931 201 aa5.52□□□□□ -1.53
NEDD9-208ENST00000504387 C18orf65Q6ZTR6 163 aa5.52□□□□□ -1.53
NEDD9-208ENST00000504387 XCL2Q9UBD3 114 aa5.52□□□□□ -1.53
NEDD9-208ENST00000504387 UBE2D4Q9Y2X8 147 aa5.52□□□□□ -1.53
NEDD9-208ENST00000504387 DNAL4O96015 105 aa5.52□□□□□ -1.53
NEDD9-208ENST00000504387 SLURP1P55000 103 aa5.52□□□□□ -1.53
NEDD9-208ENST00000504387 COX7A2LO14548 114 aa5.52□□□□□ -1.53
NEDD9-208ENST00000504387 LINC00643Q86TS7 51 aa5.52□□□□□ -1.53
NEDD9-208ENST00000504387 DYNLRB2Q8TF09 96 aa5.52□□□□□ -1.53
NEDD9-208ENST00000504387 CHCHD7Q9BUK0 85 aa5.52□□□□□ -1.53
NEDD9-208ENST00000504387 SPANXDQ9BXN6 97 aa5.52□□□□□ -1.53
NEDD9-208ENST00000504387 SPANXCQ9NY87 97 aa5.52□□□□□ -1.53
NEDD9-208ENST00000504387 IGSF10Q6WRI0 2623 aa5.52□□□□□ -1.53
NEDD9-208ENST00000504387 TRBV7-7A0A0K0K1E9 115 aa5.51□□□□□ -1.53
NEDD9-208ENST00000504387 UQCRQO14949 82 aa5.51□□□□□ -1.53
NEDD9-208ENST00000504387 LINC00158P58513 81 aa5.51□□□□□ -1.53
NEDD9-208ENST00000504387 A0A087WYN8 130 aa5.51□□□□□ -1.53
NEDD9-208ENST00000504387 HILS1P60008 231 aa5.51□□□□□ -1.53
NEDD9-208ENST00000504387 PEMTQ9UBM1 199 aa5.51□□□□□ -1.53
NEDD9-208ENST00000504387 TRGV1A0A0A0MS02 117 aa5.5□□□□□ -1.53
NEDD9-208ENST00000504387 C4orf26Q17RF5 130 aa5.5□□□□□ -1.53
NEDD9-208ENST00000504387 LECT2O14960 151 aa5.5□□□□□ -1.53
NEDD9-208ENST00000504387 C19orf54Q5BKX5 351 aa5.5□□□□□ -1.53
NEDD9-208ENST00000504387 HRCT1Q6UXD1 115 aa5.5□□□□□ -1.53
NEDD9-208ENST00000504387 C10orf105Q8TEF2 133 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms