RNA–Protein interactions for RNA: ENST00000504044.1

NFKB1-204, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2

Gene NFKB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-204ENST00000504044 PCLOQ9Y6V0 5065 aa11.68□□□□□ -0.54
NFKB1-204ENST00000504044 HSPG2P98160 4391 aa11.68□□□□□ -0.54
NFKB1-204ENST00000504044 TRBV24-1A0A075B6N3 115 aa11.67□□□□□ -0.54
NFKB1-204ENST00000504044 A0A1B0GXF2 115 aa11.67□□□□□ -0.54
NFKB1-204ENST00000504044 PHOX2AO14813 284 aa11.67□□□□□ -0.54
NFKB1-204ENST00000504044 RPL32P62910 135 aaKnown RBP11.67□□□□□ -0.54
NFKB1-204ENST00000504044 SS18Q15532 418 aa11.67□□□□□ -0.54
NFKB1-204ENST00000504044 CHCHD10Q8WYQ3 142 aaPredicted RBP11.67□□□□□ -0.54
NFKB1-204ENST00000504044 HAMPP81172 84 aa11.66□□□□□ -0.54
NFKB1-204ENST00000504044 LINC01620Q4KN68 170 aa11.66□□□□□ -0.54
NFKB1-204ENST00000504044 ORMDL3Q8N138 153 aa11.66□□□□□ -0.54
NFKB1-204ENST00000504044 D6R8Y8 96 aa11.65□□□□□ -0.54
NFKB1-204ENST00000504044 TNFRSF6BO95407 300 aa11.65□□□□□ -0.54
NFKB1-204ENST00000504044 PLA2G1BP04054 148 aaKnown RBP11.65□□□□□ -0.54
NFKB1-204ENST00000504044 CNBPP62633 177 aaKnown RBP11.65□□□□□ -0.54
NFKB1-204ENST00000504044 ZNF664Q8N3J9 261 aa11.65□□□□□ -0.54
NFKB1-204ENST00000504044 C9orf163Q8N9P6 203 aa11.65□□□□□ -0.54
NFKB1-204ENST00000504044 CHAC1Q9BUX1 264 aa11.65□□□□□ -0.54
NFKB1-204ENST00000504044 CSDC2Q9Y534 153 aaKnown RBP11.65□□□□□ -0.54
NFKB1-204ENST00000504044 CCL25O15444 150 aa11.64□□□□□ -0.55
NFKB1-204ENST00000504044 INAFM2P0DMQ5 153 aa11.64□□□□□ -0.55
NFKB1-204ENST00000504044 CDC42SE2Q9NRR3 84 aa11.64□□□□□ -0.55
NFKB1-204ENST00000504044 LINC00959A0A1B0GUT2 108 aa11.63□□□□□ -0.55
NFKB1-204ENST00000504044 SCXQ7RTU7 201 aa11.63□□□□□ -0.55
NFKB1-204ENST00000504044 SMIM2Q9BVW6 85 aa11.63□□□□□ -0.55
NFKB1-204ENST00000504044 LAMTOR2Q9Y2Q5 125 aa11.63□□□□□ -0.55
NFKB1-204ENST00000504044 APOBP04114 4563 aaKnown RBP11.63□□□□□ -0.55
NFKB1-204ENST00000504044 IGHV3-64A0A075B6Q5 118 aa11.62□□□□□ -0.55
NFKB1-204ENST00000504044 RAB5AP20339 215 aa11.62□□□□□ -0.55
NFKB1-204ENST00000504044 XCL1P47992 114 aa11.62□□□□□ -0.55
NFKB1-204ENST00000504044 TMEM136Q6ZRR5 245 aa11.62□□□□□ -0.55
NFKB1-204ENST00000504044 PKIGQ9Y2B9 76 aa11.62□□□□□ -0.55
NFKB1-204ENST00000504044 C1orf196B1AJZ1 125 aa11.61□□□□□ -0.55
NFKB1-204ENST00000504044 PRELID3AQ96N28 172 aa11.61□□□□□ -0.55
NFKB1-204ENST00000504044 TIMM21Q9BVV7 248 aa11.61□□□□□ -0.55
NFKB1-204ENST00000504044 KRTAP3-3Q9BYR6 98 aa11.61□□□□□ -0.55
NFKB1-204ENST00000504044 KRTAP3-2Q9BYR7 98 aa11.61□□□□□ -0.55
NFKB1-204ENST00000504044 CD164L2Q6UWJ8 174 aa11.6□□□□□ -0.55
NFKB1-204ENST00000504044 LINC00528Q8N1L1 170 aa11.6□□□□□ -0.55
NFKB1-204ENST00000504044 IMMP2LQ96T52 175 aa11.6□□□□□ -0.55
NFKB1-204ENST00000504044 CTDSP1Q9GZU7 261 aa11.6□□□□□ -0.55
NFKB1-204ENST00000504044 UBE2D4Q9Y2X8 147 aa11.6□□□□□ -0.55
NFKB1-204ENST00000504044 IGHV1-58A0A0C4DH39 117 aa11.59□□□□□ -0.55
NFKB1-204ENST00000504044 TMEM218A2RU14 115 aa11.59□□□□□ -0.55
NFKB1-204ENST00000504044 NPYP01303 97 aa11.59□□□□□ -0.55
NFKB1-204ENST00000504044 SPANXA1Q9NS26 97 aa11.59□□□□□ -0.55
NFKB1-204ENST00000504044 MALP21145 153 aa11.58□□□□□ -0.56
NFKB1-204ENST00000504044 FOXI1Q12951 378 aa11.58□□□□□ -0.56
NFKB1-204ENST00000504044 C15orf56Q8N910 161 aa11.58□□□□□ -0.56
NFKB1-204ENST00000504044 CIRBP-AS1Q8TBR5 109 aa11.58□□□□□ -0.56
NFKB1-204ENST00000504044 MAP1LC3AQ9H492 121 aa11.58□□□□□ -0.56
NFKB1-204ENST00000504044 GVQW2A0A096LPI5 108 aaPredicted RBP11.57□□□□□ -0.56
NFKB1-204ENST00000504044 IFITM2Q01629 132 aa11.57□□□□□ -0.56
NFKB1-204ENST00000504044 HIGD2BQ4VC39 106 aa11.57□□□□□ -0.56
NFKB1-204ENST00000504044 DPH3Q96FX2 82 aa11.57□□□□□ -0.56
NFKB1-204ENST00000504044 S100PP25815 95 aa11.56□□□□□ -0.56
NFKB1-204ENST00000504044 SDIM1Q6ZPB5 146 aa11.56□□□□□ -0.56
NFKB1-204ENST00000504044 SEC11CQ9BY50 192 aa11.56□□□□□ -0.56
NFKB1-204ENST00000504044 TRAV9-1A0A075B6T8 112 aa11.55□□□□□ -0.56
NFKB1-204ENST00000504044 TRAV13-1A0A0B4J241 112 aa11.55□□□□□ -0.56
NFKB1-204ENST00000504044 ZNF561-AS1K7EIQ3 104 aa11.55□□□□□ -0.56
NFKB1-204ENST00000504044 IFI27P40305 119 aaPredicted RBP11.55□□□□□ -0.56
NFKB1-204ENST00000504044 COX7A2LO14548 114 aa11.54□□□□□ -0.56
NFKB1-204ENST00000504044 APOMO95445 188 aa11.54□□□□□ -0.56
NFKB1-204ENST00000504044 COMMD7Q86VX2 200 aa11.54□□□□□ -0.56
NFKB1-204ENST00000504044 ABCA13Q86UQ4 5058 aa11.54□□□□□ -0.56
NFKB1-204ENST00000504044 PRSS47A8MTI9 375 aa11.53□□□□□ -0.56
NFKB1-204ENST00000504044 Q6ZUT4 128 aa11.53□□□□□ -0.56
NFKB1-204ENST00000504044 K7EMI3 77 aa11.52□□□□□ -0.57
NFKB1-204ENST00000504044 ADCYAP1P18509 176 aa11.52□□□□□ -0.57
NFKB1-204ENST00000504044 G0S2P27469 103 aa11.52□□□□□ -0.57
NFKB1-204ENST00000504044 MRPS36P82909 103 aaKnown RBP11.52□□□□□ -0.57
NFKB1-204ENST00000504044 RPL39P62891 51 aaKnown RBP11.51□□□□□ -0.57
NFKB1-204ENST00000504044 ORMDL2Q53FV1 153 aa11.51□□□□□ -0.57
NFKB1-204ENST00000504044 RNASE13Q5GAN3 156 aaKnown RBP11.51□□□□□ -0.57
NFKB1-204ENST00000504044 LOC389332A0A1B0GUA5 103 aa11.5□□□□□ -0.57
NFKB1-204ENST00000504044 IFITM10A6NMD0 228 aa11.5□□□□□ -0.57
NFKB1-204ENST00000504044 SLPIP03973 132 aa11.5□□□□□ -0.57
NFKB1-204ENST00000504044 COX19Q49B96 90 aa11.5□□□□□ -0.57
NFKB1-204ENST00000504044 Q8N8P6 123 aa11.5□□□□□ -0.57
NFKB1-204ENST00000504044 CARD19Q96LW7 228 aa11.5□□□□□ -0.57
NFKB1-204ENST00000504044 NXT2Q9NPJ8 142 aaKnown RBP11.5□□□□□ -0.57
NFKB1-204ENST00000504044 LINC00474Q9P2X8 69 aa11.5□□□□□ -0.57
NFKB1-204ENST00000504044 PYGO1Q9Y3Y4 419 aa11.5□□□□□ -0.57
NFKB1-204ENST00000504044 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.5□□□□□ -0.57
NFKB1-204ENST00000504044 CIRBPQ14011 172 aaKnown RBP11.49□□□□□ -0.57
NFKB1-204ENST00000504044 CYSLTR1Q9Y271 337 aa11.49□□□□□ -0.57
NFKB1-204ENST00000504044 COX6A2Q02221 97 aa11.48□□□□□ -0.57
NFKB1-204ENST00000504044 SYCNQ0VAF6 134 aa11.48□□□□□ -0.57
NFKB1-204ENST00000504044 Q6ZN92 141 aa11.48□□□□□ -0.57
NFKB1-204ENST00000504044 RPL37AP61513 92 aaKnown RBP11.47□□□□□ -0.57
NFKB1-204ENST00000504044 RHEBQ15382 184 aa11.47□□□□□ -0.57
NFKB1-204ENST00000504044 C2orf88Q9BSF0 95 aa11.47□□□□□ -0.57
NFKB1-204ENST00000504044 TGIF2-C20orf24A0A0A6YYL0 155 aa11.46□□□□□ -0.57
NFKB1-204ENST00000504044 PAPPA-AS1Q5QFB9 102 aa11.46□□□□□ -0.57
NFKB1-204ENST00000504044 TEX43Q6ZNM6 134 aa11.46□□□□□ -0.57
NFKB1-204ENST00000504044 SPACA4Q8TDM5 124 aa11.46□□□□□ -0.57
NFKB1-204ENST00000504044 TMEM141Q96I45 108 aa11.46□□□□□ -0.57
NFKB1-204ENST00000504044 NPSP0C0P6 89 aa11.45□□□□□ -0.58
NFKB1-204ENST00000504044 NDUFA5Q16718 116 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms