RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 RBM12B-AS1Q9P1G2 102 aa7.09□□□□□ -1.27
PDLIM5-207ENST00000503974 XCL2Q9UBD3 114 aa7.09□□□□□ -1.27
PDLIM5-207ENST00000503974 IGLV2-18A0A075B6J9 118 aa7.08□□□□□ -1.28
PDLIM5-207ENST00000503974 TRBV6-1A0A0K0K1D8 114 aa7.08□□□□□ -1.28
PDLIM5-207ENST00000503974 EGR2P11161 476 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-207ENST00000503974 Q86TA4 180 aa7.08□□□□□ -1.28
PDLIM5-207ENST00000503974 KLHL30-AS1Q8NEE0 82 aa7.08□□□□□ -1.28
PDLIM5-207ENST00000503974 TET2Q6N021 2002 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-207ENST00000503974 PLXNB1O43157 2135 aa7.08□□□□□ -1.28
PDLIM5-207ENST00000503974 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-207ENST00000503974 ATP6V0E1O15342 81 aa7.08□□□□□ -1.28
PDLIM5-207ENST00000503974 PRSS2P07478 247 aa7.08□□□□□ -1.28
PDLIM5-207ENST00000503974 Q6JHZ5 121 aa7.08□□□□□ -1.28
PDLIM5-207ENST00000503974 PRR25Q96S07 402 aa7.08□□□□□ -1.28
PDLIM5-207ENST00000503974 CLPSL1A2RUU4 121 aa7.07□□□□□ -1.28
PDLIM5-207ENST00000503974 E7EUB6 86 aa7.07□□□□□ -1.28
PDLIM5-207ENST00000503974 GATA1P15976 413 aaPredicted RBP7.07□□□□□ -1.28
PDLIM5-207ENST00000503974 PROK1P58294 105 aa7.07□□□□□ -1.28
PDLIM5-207ENST00000503974 KHDC1LQ5JSQ8 128 aa7.07□□□□□ -1.28
PDLIM5-207ENST00000503974 C10orf55Q5SWW7 151 aa7.07□□□□□ -1.28
PDLIM5-207ENST00000503974 LYZL1Q6UWQ5 148 aa7.07□□□□□ -1.28
PDLIM5-207ENST00000503974 RPL27AP46776 148 aaKnown RBP7.07□□□□□ -1.28
PDLIM5-207ENST00000503974 RNF185Q96GF1 192 aa7.07□□□□□ -1.28
PDLIM5-207ENST00000503974 NDUFA4L2Q9NRX3 87 aa7.07□□□□□ -1.28
PDLIM5-207ENST00000503974 RBMY1BA6NDE4 496 aaKnown RBP7.06□□□□□ -1.28
PDLIM5-207ENST00000503974 RBMY1EA6NEQ0 496 aaKnown RBP7.06□□□□□ -1.28
PDLIM5-207ENST00000503974 IGLV2-11P01706 119 aa7.06□□□□□ -1.28
PDLIM5-207ENST00000503974 RBMY1DP0C7P1 496 aaKnown RBP7.06□□□□□ -1.28
PDLIM5-207ENST00000503974 RBMY1A1P0DJD3 496 aaKnown RBP7.06□□□□□ -1.28
PDLIM5-207ENST00000503974 RBMY1CP0DJD4 496 aa7.06□□□□□ -1.28
PDLIM5-207ENST00000503974 RBMY1FQ15415 496 aaKnown RBP7.06□□□□□ -1.28
PDLIM5-207ENST00000503974 C6orf223Q8N319 242 aa7.06□□□□□ -1.28
PDLIM5-207ENST00000503974 TM2D3Q9BRN9 247 aa7.06□□□□□ -1.28
PDLIM5-207ENST00000503974 ICOSQ9Y6W8 199 aa7.06□□□□□ -1.28
PDLIM5-207ENST00000503974 COX6CP09669 75 aa7.05□□□□□ -1.28
PDLIM5-207ENST00000503974 PRCDQ00LT1 54 aa7.05□□□□□ -1.28
PDLIM5-207ENST00000503974 LAGE3Q14657 143 aa7.05□□□□□ -1.28
PDLIM5-207ENST00000503974 KLK9Q2XQG4 91 aa7.05□□□□□ -1.28
PDLIM5-207ENST00000503974 KRTAP21-3Q3LHN1 58 aa7.05□□□□□ -1.28
PDLIM5-207ENST00000503974 Q9H3A6 140 aa7.05□□□□□ -1.28
PDLIM5-207ENST00000503974 KLK9Q9UKQ9 250 aa7.05□□□□□ -1.28
PDLIM5-207ENST00000503974 ATRQ13535 2644 aa7.05□□□□□ -1.28
PDLIM5-207ENST00000503974 APOC4P55056 127 aa7.05□□□□□ -1.28
PDLIM5-207ENST00000503974 C20orf197Q8N268 126 aa7.05□□□□□ -1.28
PDLIM5-207ENST00000503974 C14orf178Q8N769 122 aaPredicted RBP7.05□□□□□ -1.28
PDLIM5-207ENST00000503974 FANCD2OSQ96PS1 177 aa7.05□□□□□ -1.28
PDLIM5-207ENST00000503974 TRBV19A0A075B6N1 114 aa7.04□□□□□ -1.28
PDLIM5-207ENST00000503974 G3V318 75 aa7.04□□□□□ -1.28
PDLIM5-207ENST00000503974 IGLV1-40P01703 118 aa7.04□□□□□ -1.28
PDLIM5-207ENST00000503974 WT1-ASQ06250 92 aa7.04□□□□□ -1.28
PDLIM5-207ENST00000503974 C10orf113Q5VZT2 155 aa7.04□□□□□ -1.28
PDLIM5-207ENST00000503974 PATE2Q6UY27 113 aa7.04□□□□□ -1.28
PDLIM5-207ENST00000503974 A0A087WVE0 104 aa7.04□□□□□ -1.28
PDLIM5-207ENST00000503974 IGHV1-58A0A0C4DH39 117 aa7.04□□□□□ -1.28
PDLIM5-207ENST00000503974 H3BUA1 57 aa7.04□□□□□ -1.28
PDLIM5-207ENST00000503974 COX7A2P2O60397 106 aa7.04□□□□□ -1.28
PDLIM5-207ENST00000503974 GAS8-AS1O95177 125 aa7.04□□□□□ -1.28
PDLIM5-207ENST00000503974 ECSCRQ19T08 205 aa7.04□□□□□ -1.28
PDLIM5-207ENST00000503974 HIST2H2BDQ6DRA6 164 aa7.04□□□□□ -1.28
PDLIM5-207ENST00000503974 PRNTQ86SH4 94 aa7.04□□□□□ -1.28
PDLIM5-207ENST00000503974 CLEC2BQ92478 149 aa7.04□□□□□ -1.28
PDLIM5-207ENST00000503974 UBE2D4Q9Y2X8 147 aa7.04□□□□□ -1.28
PDLIM5-207ENST00000503974 C10orf99Q6UWK7 81 aa7.03□□□□□ -1.28
PDLIM5-207ENST00000503974 MUSTN1Q8IVN3 82 aa7.03□□□□□ -1.28
PDLIM5-207ENST00000503974 AMELXQ99217 191 aa7.03□□□□□ -1.28
PDLIM5-207ENST00000503974 IGKV3D-7A0A0C4DH55 119 aa7.02□□□□□ -1.29
PDLIM5-207ENST00000503974 GHRHP01286 108 aa7.02□□□□□ -1.29
PDLIM5-207ENST00000503974 HOXD3P31249 432 aaPredicted RBP7.02□□□□□ -1.29
PDLIM5-207ENST00000503974 CRIP1P50238 77 aa7.02□□□□□ -1.29
PDLIM5-207ENST00000503974 KRTAP10-3P60369 221 aa7.02□□□□□ -1.29
PDLIM5-207ENST00000503974 RBM3P98179 157 aaKnown RBP7.02□□□□□ -1.29
PDLIM5-207ENST00000503974 OXLD1Q5BKU9 147 aa7.02□□□□□ -1.29
PDLIM5-207ENST00000503974 PVRIGQ6DKI7 326 aa7.02□□□□□ -1.29
PDLIM5-207ENST00000503974 ZNF491Q8N8L2 437 aa7.02□□□□□ -1.29
PDLIM5-207ENST00000503974 TRAV8-3A0A0A6YYJ7 113 aa7.02□□□□□ -1.29
PDLIM5-207ENST00000503974 K7EMT4 169 aa7.02□□□□□ -1.29
PDLIM5-207ENST00000503974 ATP5EP56381 51 aaPredicted RBP7.02□□□□□ -1.29
PDLIM5-207ENST00000503974 CCDC140Q96MF4 163 aa7.02□□□□□ -1.29
PDLIM5-207ENST00000503974 IBA57-AS1B1ANH7 110 aa7.01□□□□□ -1.29
PDLIM5-207ENST00000503974 APELAP0DMC3 54 aa7.01□□□□□ -1.29
PDLIM5-207ENST00000503974 VSIG2Q96IQ7 327 aa7.01□□□□□ -1.29
PDLIM5-207ENST00000503974 FBN1P35555 2871 aaKnown RBP7.01□□□□□ -1.29
PDLIM5-207ENST00000503974 IGLV11-55A0A075B6I3 123 aa7□□□□□ -1.29
PDLIM5-207ENST00000503974 KLKP1Q107X0 134 aa7□□□□□ -1.29
PDLIM5-207ENST00000503974 UNQ9165/PRO28630Q6UXU0 137 aa7□□□□□ -1.29
PDLIM5-207ENST00000503974 INAFM2P0DMQ5 153 aa7□□□□□ -1.29
PDLIM5-207ENST00000503974 ERHP84090 104 aaKnown RBP7□□□□□ -1.29
PDLIM5-207ENST00000503974 C11orf44Q8N8P7 122 aa7□□□□□ -1.29
PDLIM5-207ENST00000503974 MDFIQ99750 246 aa7□□□□□ -1.29
PDLIM5-207ENST00000503974 KLK15Q9H2R5 256 aa7□□□□□ -1.29
PDLIM5-207ENST00000503974 CD28P10747 220 aa6.99□□□□□ -1.29
PDLIM5-207ENST00000503974 TSPEAR-AS2P59090 65 aa6.99□□□□□ -1.29
PDLIM5-207ENST00000503974 C2orf83Q53S99 150 aa6.99□□□□□ -1.29
PDLIM5-207ENST00000503974 CD164L2Q6UWJ8 174 aa6.99□□□□□ -1.29
PDLIM5-207ENST00000503974 TMEM75Q8N9X5 138 aa6.99□□□□□ -1.29
PDLIM5-207ENST00000503974 MPLKIPQ8TAP9 179 aa6.99□□□□□ -1.29
PDLIM5-207ENST00000503974 ADARB2-AS1A8MUL3 147 aa6.99□□□□□ -1.29
PDLIM5-207ENST00000503974 I3L3M4 83 aa6.99□□□□□ -1.29
PDLIM5-207ENST00000503974 LGALS3P17931 250 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-207ENST00000503974 DAD1P61803 113 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms