RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 CAMPP49913 170 aa11.71□□□□□ -0.53
RNF4-204ENST00000503659 SUMO2P61956 95 aaKnown RBP11.71□□□□□ -0.53
RNF4-204ENST00000503659 FOXI1Q12951 378 aa11.71□□□□□ -0.53
RNF4-204ENST00000503659 TMEM101Q96IK0 257 aa11.71□□□□□ -0.53
RNF4-204ENST00000503659 BTF3L4Q96K17 158 aa11.71□□□□□ -0.53
RNF4-204ENST00000503659 VCYO14598 125 aa11.7□□□□□ -0.54
RNF4-204ENST00000503659 PPP1R17O96001 155 aa11.7□□□□□ -0.54
RNF4-204ENST00000503659 CDC42SE2Q9NRR3 84 aa11.7□□□□□ -0.54
RNF4-204ENST00000503659 AP5S1Q9NUS5 200 aa11.7□□□□□ -0.54
RNF4-204ENST00000503659 LINC00959A0A1B0GUT2 108 aa11.69□□□□□ -0.54
RNF4-204ENST00000503659 A0A1B0GW15 77 aa11.69□□□□□ -0.54
RNF4-204ENST00000503659 A0A1B0GXF2 115 aa11.69□□□□□ -0.54
RNF4-204ENST00000503659 CIRBPQ14011 172 aaKnown RBP11.69□□□□□ -0.54
RNF4-204ENST00000503659 HIGD2BQ4VC39 106 aa11.69□□□□□ -0.54
RNF4-204ENST00000503659 CFAP161Q6P656 301 aa11.69□□□□□ -0.54
RNF4-204ENST00000503659 IGHV3-64A0A075B6Q5 118 aa11.68□□□□□ -0.54
RNF4-204ENST00000503659 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.68□□□□□ -0.54
RNF4-204ENST00000503659 MRPL54Q6P161 138 aaKnown RBP11.68□□□□□ -0.54
RNF4-204ENST00000503659 GVQW2A0A096LPI5 108 aaPredicted RBP11.67□□□□□ -0.54
RNF4-204ENST00000503659 PPP1R2P9O14990 202 aa11.67□□□□□ -0.54
RNF4-204ENST00000503659 CCL25O15444 150 aa11.67□□□□□ -0.54
RNF4-204ENST00000503659 FCER1GP30273 86 aa11.67□□□□□ -0.54
RNF4-204ENST00000503659 XCL1P47992 114 aa11.67□□□□□ -0.54
RNF4-204ENST00000503659 HBBP68871 147 aa11.67□□□□□ -0.54
RNF4-204ENST00000503659 TRBV24-1A0A075B6N3 115 aa11.66□□□□□ -0.54
RNF4-204ENST00000503659 LINC00862A6NCI5 91 aa11.66□□□□□ -0.54
RNF4-204ENST00000503659 CHTF8P0CG12 524 aa11.66□□□□□ -0.54
RNF4-204ENST00000503659 ZNF664Q8N3J9 261 aa11.66□□□□□ -0.54
RNF4-204ENST00000503659 KIR2DL4Q99706 377 aa11.66□□□□□ -0.54
RNF4-204ENST00000503659 UBE2D4Q9Y2X8 147 aa11.66□□□□□ -0.54
RNF4-204ENST00000503659 CKS2P33552 79 aa11.65□□□□□ -0.54
RNF4-204ENST00000503659 C20orf78Q9BR46 151 aa11.65□□□□□ -0.54
RNF4-204ENST00000503659 LRP1Q07954 4544 aaKnown RBP11.64□□□□□ -0.55
RNF4-204ENST00000503659 D6R8Y8 96 aa11.64□□□□□ -0.55
RNF4-204ENST00000503659 OXTP01178 125 aa11.64□□□□□ -0.55
RNF4-204ENST00000503659 S100A8P05109 93 aa11.64□□□□□ -0.55
RNF4-204ENST00000503659 RPL32P62910 135 aaKnown RBP11.64□□□□□ -0.55
RNF4-204ENST00000503659 CSDC2Q9Y534 153 aaKnown RBP11.64□□□□□ -0.55
RNF4-204ENST00000503659 F8W036 122 aa11.63□□□□□ -0.55
RNF4-204ENST00000503659 TNFRSF6BO95407 300 aa11.63□□□□□ -0.55
RNF4-204ENST00000503659 SPACA4Q8TDM5 124 aa11.63□□□□□ -0.55
RNF4-204ENST00000503659 FAT3Q8TDW7 4589 aa11.63□□□□□ -0.55
RNF4-204ENST00000503659 NPYP01303 97 aa11.62□□□□□ -0.55
RNF4-204ENST00000503659 RPL37AP61513 92 aaKnown RBP11.62□□□□□ -0.55
RNF4-204ENST00000503659 SS18Q15532 418 aa11.62□□□□□ -0.55
RNF4-204ENST00000503659 RNASE13Q5GAN3 156 aaKnown RBP11.62□□□□□ -0.55
RNF4-204ENST00000503659 CD164L2Q6UWJ8 174 aa11.62□□□□□ -0.55
RNF4-204ENST00000503659 IGHV1-58A0A0C4DH39 117 aa11.61□□□□□ -0.55
RNF4-204ENST00000503659 RAB14P61106 215 aa11.61□□□□□ -0.55
RNF4-204ENST00000503659 COX6A2Q02221 97 aa11.61□□□□□ -0.55
RNF4-204ENST00000503659 Q6ZUT4 128 aa11.61□□□□□ -0.55
RNF4-204ENST00000503659 ATP5L2Q7Z4Y8 100 aa11.61□□□□□ -0.55
RNF4-204ENST00000503659 SMIM2Q9BVW6 85 aa11.61□□□□□ -0.55
RNF4-204ENST00000503659 A0A087WYN8 130 aa11.6□□□□□ -0.55
RNF4-204ENST00000503659 PNRC1Q12796 327 aaPredicted RBP11.6□□□□□ -0.55
RNF4-204ENST00000503659 TIMM21Q9BVV7 248 aa11.6□□□□□ -0.55
RNF4-204ENST00000503659 PHOX2AO14813 284 aa11.59□□□□□ -0.55
RNF4-204ENST00000503659 HNRNPA3P51991 378 aaKnown RBP11.59□□□□□ -0.55
RNF4-204ENST00000503659 RPL39P62891 51 aaKnown RBP11.59□□□□□ -0.55
RNF4-204ENST00000503659 PRSS3P2Q8NHM4 247 aa11.59□□□□□ -0.55
RNF4-204ENST00000503659 FAM104AQ969W3 186 aa11.59□□□□□ -0.55
RNF4-204ENST00000503659 LINC00526Q96FQ7 95 aa11.59□□□□□ -0.55
RNF4-204ENST00000503659 C1orf196B1AJZ1 125 aa11.58□□□□□ -0.56
RNF4-204ENST00000503659 PPBPP02775 128 aa11.58□□□□□ -0.56
RNF4-204ENST00000503659 SMAGPQ0VAQ4 97 aa11.58□□□□□ -0.56
RNF4-204ENST00000503659 CLLU1Q5K131 121 aa11.58□□□□□ -0.56
RNF4-204ENST00000503659 TCAPO15273 167 aa11.57□□□□□ -0.56
RNF4-204ENST00000503659 SERTAD4-AS1Q5TG53 156 aa11.57□□□□□ -0.56
RNF4-204ENST00000503659 ORMDL3Q8N138 153 aa11.57□□□□□ -0.56
RNF4-204ENST00000503659 TMEM18Q96B42 140 aa11.57□□□□□ -0.56
RNF4-204ENST00000503659 PLAC8Q9NZF1 115 aa11.57□□□□□ -0.56
RNF4-204ENST00000503659 TRAV13-1A0A0B4J241 112 aa11.56□□□□□ -0.56
RNF4-204ENST00000503659 MT-ND4LP03901 98 aa11.56□□□□□ -0.56
RNF4-204ENST00000503659 ANAPC16Q96DE5 110 aa11.56□□□□□ -0.56
RNF4-204ENST00000503659 A0A096LNI7 61 aa11.55□□□□□ -0.56
RNF4-204ENST00000503659 IGKV2-24A0A0C4DH68 120 aa11.55□□□□□ -0.56
RNF4-204ENST00000503659 DPH3Q96FX2 82 aa11.55□□□□□ -0.56
RNF4-204ENST00000503659 CARD19Q96LW7 228 aa11.55□□□□□ -0.56
RNF4-204ENST00000503659 COX7A2LO14548 114 aa11.54□□□□□ -0.56
RNF4-204ENST00000503659 TMEM136Q6ZRR5 245 aa11.54□□□□□ -0.56
RNF4-204ENST00000503659 PRELID3AQ96N28 172 aa11.54□□□□□ -0.56
RNF4-204ENST00000503659 OPRPNQ99935 248 aaPredicted RBP11.54□□□□□ -0.56
RNF4-204ENST00000503659 SPANXA1Q9NS26 97 aa11.54□□□□□ -0.56
RNF4-204ENST00000503659 ADCYAP1P18509 176 aa11.53□□□□□ -0.56
RNF4-204ENST00000503659 IFITM2Q01629 132 aa11.53□□□□□ -0.56
RNF4-204ENST00000503659 MAJINQ3KP22 176 aa11.53□□□□□ -0.56
RNF4-204ENST00000503659 IGLV4-69A0A075B6H9 119 aa11.52□□□□□ -0.57
RNF4-204ENST00000503659 ZNF561-AS1K7EIQ3 104 aa11.52□□□□□ -0.57
RNF4-204ENST00000503659 MALP21145 153 aa11.52□□□□□ -0.57
RNF4-204ENST00000503659 MRPS36P82909 103 aaKnown RBP11.52□□□□□ -0.57
RNF4-204ENST00000503659 SYCNQ0VAF6 134 aa11.52□□□□□ -0.57
RNF4-204ENST00000503659 PRSS47A8MTI9 375 aa11.51□□□□□ -0.57
RNF4-204ENST00000503659 C5orf38Q86SI9 138 aa11.51□□□□□ -0.57
RNF4-204ENST00000503659 STPG4Q8N801 248 aa11.5□□□□□ -0.57
RNF4-204ENST00000503659 LAMTOR2Q9Y2Q5 125 aa11.5□□□□□ -0.57
RNF4-204ENST00000503659 Q6ZRU5 148 aa11.49□□□□□ -0.57
RNF4-204ENST00000503659 LOC389332A0A1B0GUA5 103 aa11.48□□□□□ -0.57
RNF4-204ENST00000503659 RAB5AP20339 215 aa11.48□□□□□ -0.57
RNF4-204ENST00000503659 UQCC3Q6UW78 93 aa11.48□□□□□ -0.57
RNF4-204ENST00000503659 MAP1LC3AQ9H492 121 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms