RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 NPC2P61916 151 aa3.51□□□□□ -1.85
NDFIP1-202ENST00000503388 UBE2D2P62837 147 aa3.51□□□□□ -1.85
NDFIP1-202ENST00000503388 HAMPP81172 84 aa3.51□□□□□ -1.85
NDFIP1-202ENST00000503388 NREPQ16612 68 aa3.51□□□□□ -1.85
NDFIP1-202ENST00000503388 ZNF625Q96I27 306 aaPredicted RBP3.51□□□□□ -1.85
NDFIP1-202ENST00000503388 UBE2D4Q9Y2X8 147 aa3.51□□□□□ -1.85
NDFIP1-202ENST00000503388 OTOGLQ3ZCN5 2332 aa3.51□□□□□ -1.85
NDFIP1-202ENST00000503388 SPENQ96T58 3664 aaKnown RBP3.5□□□□□ -1.85
NDFIP1-202ENST00000503388 TRBV12-3P01733 135 aa3.5□□□□□ -1.85
NDFIP1-202ENST00000503388 WFDC2Q14508 124 aa3.5□□□□□ -1.85
NDFIP1-202ENST00000503388 C20orf173Q96LM9 149 aa3.5□□□□□ -1.85
NDFIP1-202ENST00000503388 V9GYY9 64 aa3.5□□□□□ -1.85
NDFIP1-202ENST00000503388 NDUFC2-KCTD14E9PQ53 114 aa3.5□□□□□ -1.85
NDFIP1-202ENST00000503388 Q8N976 141 aa3.5□□□□□ -1.85
NDFIP1-202ENST00000503388 TCL1BO95988 128 aa3.5□□□□□ -1.85
NDFIP1-202ENST00000503388 C5orf38Q86SI9 138 aa3.5□□□□□ -1.85
NDFIP1-202ENST00000503388 LINC00474Q9P2X8 69 aa3.5□□□□□ -1.85
NDFIP1-202ENST00000503388 GVINP1Q7Z2Y8 2422 aa3.5□□□□□ -1.85
NDFIP1-202ENST00000503388 IGKV2D-24A0A075B6R9 120 aa3.49□□□□□ -1.85
NDFIP1-202ENST00000503388 TRAV10A0A0B4J240 114 aa3.49□□□□□ -1.85
NDFIP1-202ENST00000503388 RPL28P46779 137 aaKnown RBP3.49□□□□□ -1.85
NDFIP1-202ENST00000503388 REG3AQ06141 175 aa3.49□□□□□ -1.85
NDFIP1-202ENST00000503388 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.49□□□□□ -1.85
NDFIP1-202ENST00000503388 PCNX1Q96RV3 2341 aa3.49□□□□□ -1.85
NDFIP1-202ENST00000503388 IGLV2-18A0A075B6J9 118 aa3.49□□□□□ -1.85
NDFIP1-202ENST00000503388 M0R378 163 aa3.49□□□□□ -1.85
NDFIP1-202ENST00000503388 PRR31Q5SQ13 230 aa3.49□□□□□ -1.85
NDFIP1-202ENST00000503388 Q6JHZ5 121 aa3.49□□□□□ -1.85
NDFIP1-202ENST00000503388 ZNF706Q9Y5V0 76 aaPredicted RBP3.49□□□□□ -1.85
NDFIP1-202ENST00000503388 ANK3Q12955 4377 aaKnown RBP3.49□□□□□ -1.85
NDFIP1-202ENST00000503388 SPTAN1Q13813 2472 aaKnown RBP3.49□□□□□ -1.85
NDFIP1-202ENST00000503388 TRBV10-3A0A0K0K1G6 114 aa3.49□□□□□ -1.85
NDFIP1-202ENST00000503388 F8W735 103 aaPredicted RBP3.49□□□□□ -1.85
NDFIP1-202ENST00000503388 LINC00310P59036 64 aa3.49□□□□□ -1.85
NDFIP1-202ENST00000503388 RNASE8Q8TDE3 154 aaKnown RBP3.49□□□□□ -1.85
NDFIP1-202ENST00000503388 SS18L2Q9UHA2 77 aa3.49□□□□□ -1.85
NDFIP1-202ENST00000503388 ABCA1O95477 2261 aa3.48□□□□□ -1.85
NDFIP1-202ENST00000503388 H3BNG1 76 aa3.48□□□□□ -1.85
NDFIP1-202ENST00000503388 LECT2O14960 151 aa3.48□□□□□ -1.85
NDFIP1-202ENST00000503388 IGLV1-51P01701 117 aa3.48□□□□□ -1.85
NDFIP1-202ENST00000503388 C22orf34Q6ZV56 151 aa3.48□□□□□ -1.85
NDFIP1-202ENST00000503388 FAM19A4Q96LR4 140 aa3.48□□□□□ -1.85
NDFIP1-202ENST00000503388 B9D2Q9BPU9 175 aa3.48□□□□□ -1.85
NDFIP1-202ENST00000503388 CDKN2A-AS1Q9UH64 79 aa3.48□□□□□ -1.85
NDFIP1-202ENST00000503388 B5MCH6 92 aa3.48□□□□□ -1.85
NDFIP1-202ENST00000503388 EGFEM1PQ0D2K5 195 aa3.48□□□□□ -1.85
NDFIP1-202ENST00000503388 CDC42SE2Q9NRR3 84 aa3.48□□□□□ -1.85
NDFIP1-202ENST00000503388 IGLV4-69A0A075B6H9 119 aa3.48□□□□□ -1.85
NDFIP1-202ENST00000503388 A0A087WZ39 114 aa3.48□□□□□ -1.85
NDFIP1-202ENST00000503388 FRMD6-AS1P0C7T7 363 aa3.48□□□□□ -1.85
NDFIP1-202ENST00000503388 DEFB121Q5J5C9 76 aa3.48□□□□□ -1.85
NDFIP1-202ENST00000503388 C2orf48Q96LS8 159 aa3.48□□□□□ -1.85
NDFIP1-202ENST00000503388 COL6A6A6NMZ7 2263 aa3.48□□□□□ -1.85
NDFIP1-202ENST00000503388 CREBBPQ92793 2442 aa3.48□□□□□ -1.85
NDFIP1-202ENST00000503388 CHCHD10Q8WYQ3 142 aaPredicted RBP3.48□□□□□ -1.85
NDFIP1-202ENST00000503388 CACNA1BQ00975 2339 aa3.48□□□□□ -1.85
NDFIP1-202ENST00000503388 UBE2BP63146 152 aa3.47□□□□□ -1.85
NDFIP1-202ENST00000503388 DEFB136Q30KP8 78 aa3.47□□□□□ -1.85
NDFIP1-202ENST00000503388 LINC00482Q8N8I6 264 aa3.47□□□□□ -1.85
NDFIP1-202ENST00000503388 ZNF469Q96JG9 3925 aaPredicted RBP3.47□□□□□ -1.85
NDFIP1-202ENST00000503388 TRBV7-6A0A0J9YX20 115 aa3.47□□□□□ -1.85
NDFIP1-202ENST00000503388 NDUFV3P56181 108 aaKnown RBP3.47□□□□□ -1.85
NDFIP1-202ENST00000503388 Q6ZTI0 123 aa3.47□□□□□ -1.85
NDFIP1-202ENST00000503388 URB1-AS1Q96HZ7 61 aa3.47□□□□□ -1.85
NDFIP1-202ENST00000503388 LINC01006Q8NI28 216 aa3.47□□□□□ -1.85
NDFIP1-202ENST00000503388 C11orf45Q8TAV5 145 aa3.47□□□□□ -1.85
NDFIP1-202ENST00000503388 C11orf21Q9P2W6 132 aa3.47□□□□□ -1.85
NDFIP1-202ENST00000503388 SPTBN2O15020 2390 aa3.47□□□□□ -1.85
NDFIP1-202ENST00000503388 FAM236AA0A1B0GUQ0 79 aa3.46□□□□□ -1.86
NDFIP1-202ENST00000503388 LINC00959A0A1B0GUT2 108 aa3.46□□□□□ -1.86
NDFIP1-202ENST00000503388 FAM236BA0A1B0GV22 79 aa3.46□□□□□ -1.86
NDFIP1-202ENST00000503388 A8MTW9 85 aa3.46□□□□□ -1.86
NDFIP1-202ENST00000503388 C19orf84I3L1E1 186 aa3.46□□□□□ -1.86
NDFIP1-202ENST00000503388 TRIAP1O43715 76 aa3.46□□□□□ -1.86
NDFIP1-202ENST00000503388 ZNF843Q8N446 348 aa3.46□□□□□ -1.86
NDFIP1-202ENST00000503388 TNXBP22105 4242 aa3.46□□□□□ -1.86
NDFIP1-202ENST00000503388 IGLV5-45A0A087WSX0 123 aa3.46□□□□□ -1.86
NDFIP1-202ENST00000503388 RPL37AP8A6NKH3 93 aa3.46□□□□□ -1.86
NDFIP1-202ENST00000503388 RBX1P62877 108 aa3.46□□□□□ -1.86
NDFIP1-202ENST00000503388 SERP2Q8N6R1 65 aa3.46□□□□□ -1.86
NDFIP1-202ENST00000503388 SYCNQ0VAF6 134 aa3.46□□□□□ -1.86
NDFIP1-202ENST00000503388 C3orf22Q8N5N4 141 aa3.46□□□□□ -1.86
NDFIP1-202ENST00000503388 KIF25-AS1Q9Y6Z4 181 aa3.46□□□□□ -1.86
NDFIP1-202ENST00000503388 ARFGEF3Q5TH69 2177 aa3.46□□□□□ -1.86
NDFIP1-202ENST00000503388 MAPKAPK5-AS1Q8N8E1 139 aa3.45□□□□□ -1.86
NDFIP1-202ENST00000503388 BPY2O14599 106 aa3.45□□□□□ -1.86
NDFIP1-202ENST00000503388 KLK12Q9UKR0 248 aa3.45□□□□□ -1.86
NDFIP1-202ENST00000503388 PTPRQQ9UMZ3 2332 aa3.45□□□□□ -1.86
NDFIP1-202ENST00000503388 LOC107984640A0A0U1RRK4 108 aa3.45□□□□□ -1.86
NDFIP1-202ENST00000503388 RPL18AQ02543 176 aaKnown RBP3.45□□□□□ -1.86
NDFIP1-202ENST00000503388 Q6ZQT7 251 aa3.45□□□□□ -1.86
NDFIP1-202ENST00000503388 MRPL55Q7Z7F7 128 aaKnown RBP3.45□□□□□ -1.86
NDFIP1-202ENST00000503388 FAT3Q8TDW7 4589 aa3.45□□□□□ -1.86
NDFIP1-202ENST00000503388 TRAV23DV6A0A075B6W5 121 aa3.44□□□□□ -1.86
NDFIP1-202ENST00000503388 IGLV5-39A0A0G2JS06 123 aa3.44□□□□□ -1.86
NDFIP1-202ENST00000503388 RNASE13Q5GAN3 156 aaKnown RBP3.44□□□□□ -1.86
NDFIP1-202ENST00000503388 LINC00242Q5T6M2 205 aa3.44□□□□□ -1.86
NDFIP1-202ENST00000503388 PRR9Q5T870 116 aa3.44□□□□□ -1.86
NDFIP1-202ENST00000503388 FAM19A3Q7Z5A8 133 aa3.44□□□□□ -1.86
NDFIP1-202ENST00000503388 MAPK1IP1LQ8NDC0 245 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms