RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 IGLV4-69A0A075B6H9 119 aa12.82□□□□□ -0.36
HMGXB3-201ENST00000502717 ATP5EP2Q5VTU8 51 aa12.82□□□□□ -0.36
HMGXB3-201ENST00000502717 A6NDX4 124 aa12.82□□□□□ -0.36
HMGXB3-201ENST00000502717 C16orf74Q96GX8 76 aa12.82□□□□□ -0.36
HMGXB3-201ENST00000502717 K7EQG2 157 aa12.82□□□□□ -0.36
HMGXB3-201ENST00000502717 M0QXV9 152 aa12.82□□□□□ -0.36
HMGXB3-201ENST00000502717 CXCL5P42830 114 aa12.82□□□□□ -0.36
HMGXB3-201ENST00000502717 MYO9AB2RTY4 2548 aa12.81□□□□□ -0.36
HMGXB3-201ENST00000502717 CRIP2P52943 208 aaPredicted RBP12.81□□□□□ -0.36
HMGXB3-201ENST00000502717 LINC01546A6NGU7 62 aa12.81□□□□□ -0.36
HMGXB3-201ENST00000502717 KLLNB2CW77 178 aa12.81□□□□□ -0.36
HMGXB3-201ENST00000502717 PLA2G2AP14555 144 aa12.81□□□□□ -0.36
HMGXB3-201ENST00000502717 SERP2Q8N6R1 65 aa12.81□□□□□ -0.36
HMGXB3-201ENST00000502717 NDUFC2O95298 119 aa12.8□□□□□ -0.36
HMGXB3-201ENST00000502717 SPART-AS1P0CW21 52 aa12.8□□□□□ -0.36
HMGXB3-201ENST00000502717 TRAV23DV6A0A075B6W5 121 aa12.8□□□□□ -0.36
HMGXB3-201ENST00000502717 INAFM1C9JVW0 142 aa12.79□□□□□ -0.36
HMGXB3-201ENST00000502717 WFDC11Q8NEX6 87 aa12.79□□□□□ -0.36
HMGXB3-201ENST00000502717 DSCAMO60469 2012 aa12.79□□□□□ -0.36
HMGXB3-201ENST00000502717 PDE6GP18545 87 aa12.79□□□□□ -0.36
HMGXB3-201ENST00000502717 RPL18AQ02543 176 aaKnown RBP12.79□□□□□ -0.36
HMGXB3-201ENST00000502717 CDK2AP2O75956 126 aa12.79□□□□□ -0.36
HMGXB3-201ENST00000502717 TET2Q6N021 2002 aaPredicted RBP12.79□□□□□ -0.36
HMGXB3-201ENST00000502717 LMO4P61968 165 aa12.78□□□□□ -0.36
HMGXB3-201ENST00000502717 MRPS36P82909 103 aaKnown RBP12.78□□□□□ -0.36
HMGXB3-201ENST00000502717 C20orf197Q8N268 126 aa12.78□□□□□ -0.36
HMGXB3-201ENST00000502717 FAM110AQ9BQ89 295 aa12.78□□□□□ -0.36
HMGXB3-201ENST00000502717 Q6ZQT7 251 aa12.78□□□□□ -0.36
HMGXB3-201ENST00000502717 CRYGDP07320 174 aa12.77□□□□□ -0.36
HMGXB3-201ENST00000502717 FAM222AQ5U5X8 452 aa12.77□□□□□ -0.36
HMGXB3-201ENST00000502717 CEP350Q5VT06 3117 aa12.77□□□□□ -0.36
HMGXB3-201ENST00000502717 TSPEAR-AS2P59090 65 aa12.77□□□□□ -0.37
HMGXB3-201ENST00000502717 C9orf85Q96MD7 179 aa12.77□□□□□ -0.37
HMGXB3-201ENST00000502717 A8MZ25 164 aa12.77□□□□□ -0.37
HMGXB3-201ENST00000502717 NKAPP1Q8N9T2 125 aa12.77□□□□□ -0.37
HMGXB3-201ENST00000502717 A0A096LPF7 62 aa12.76□□□□□ -0.37
HMGXB3-201ENST00000502717 UPK3BQ9BT76 320 aa12.76□□□□□ -0.37
HMGXB3-201ENST00000502717 PRO0461Q9UI25 63 aa12.76□□□□□ -0.37
HMGXB3-201ENST00000502717 FAM236DA0A1B0GTK5 79 aa12.75□□□□□ -0.37
HMGXB3-201ENST00000502717 FAM236CP0DP71 79 aa12.75□□□□□ -0.37
HMGXB3-201ENST00000502717 PIK3CD-AS1Q5SR53 167 aa12.75□□□□□ -0.37
HMGXB3-201ENST00000502717 ARHGAP32A7KAX9 2087 aa12.75□□□□□ -0.37
HMGXB3-201ENST00000502717 F8W735 103 aaPredicted RBP12.74□□□□□ -0.37
HMGXB3-201ENST00000502717 DNAJC9-AS1A6NH13 148 aa12.74□□□□□ -0.37
HMGXB3-201ENST00000502717 LINC00694P0DN24 101 aa12.74□□□□□ -0.37
HMGXB3-201ENST00000502717 USP17L23D6RBM5 183 aa12.74□□□□□ -0.37
HMGXB3-201ENST00000502717 MRGPRG-AS1Q2M3A8 158 aa12.74□□□□□ -0.37
HMGXB3-201ENST00000502717 AGRNO00468 2067 aa12.73□□□□□ -0.37
HMGXB3-201ENST00000502717 GYPEP15421 78 aa12.73□□□□□ -0.37
HMGXB3-201ENST00000502717 IBA57-AS1B1ANH7 110 aa12.73□□□□□ -0.37
HMGXB3-201ENST00000502717 C19orf84I3L1E1 186 aa12.73□□□□□ -0.37
HMGXB3-201ENST00000502717 CEP295Q9C0D2 2601 aa12.73□□□□□ -0.37
HMGXB3-201ENST00000502717 LINC00526Q96FQ7 95 aa12.72□□□□□ -0.37
HMGXB3-201ENST00000502717 UBE2D4Q9Y2X8 147 aa12.72□□□□□ -0.37
HMGXB3-201ENST00000502717 POM121L12Q8N7R1 296 aa12.72□□□□□ -0.37
HMGXB3-201ENST00000502717 NCR3O14931 201 aa12.71□□□□□ -0.37
HMGXB3-201ENST00000502717 SMCPP49901 116 aaPredicted RBP12.71□□□□□ -0.37
HMGXB3-201ENST00000502717 NREPQ16612 68 aa12.71□□□□□ -0.37
HMGXB3-201ENST00000502717 PROK1P58294 105 aa12.71□□□□□ -0.38
HMGXB3-201ENST00000502717 MAP6D1Q9H9H5 199 aa12.71□□□□□ -0.38
HMGXB3-201ENST00000502717 COL4A2P08572 1712 aa12.7□□□□□ -0.38
HMGXB3-201ENST00000502717 CITED2Q99967 270 aaPredicted RBP12.7□□□□□ -0.38
HMGXB3-201ENST00000502717 FUSP35637 526 aaKnown RBP eCLIP12.69□□□□□ -0.38
HMGXB3-201ENST00000502717 C11orf71Q6IPW1 123 aa12.69□□□□□ -0.38
HMGXB3-201ENST00000502717 ENHOQ6UWT2 76 aa12.69□□□□□ -0.38
HMGXB3-201ENST00000502717 Q6JHZ5 121 aa12.69□□□□□ -0.38
HMGXB3-201ENST00000502717 IGKV2D-24A0A075B6R9 120 aa12.68□□□□□ -0.38
HMGXB3-201ENST00000502717 IGHV4-31P0DP07 118 aa12.68□□□□□ -0.38
HMGXB3-201ENST00000502717 IGLV10-54A0A075B6I4 117 aa12.68□□□□□ -0.38
HMGXB3-201ENST00000502717 SLPIP03973 132 aa12.68□□□□□ -0.38
HMGXB3-201ENST00000502717 LY6G6DO95868 133 aa12.67□□□□□ -0.38
HMGXB3-201ENST00000502717 DIRC1Q969H9 104 aa12.66□□□□□ -0.38
HMGXB3-201ENST00000502717 Q6ZTI0 123 aa12.66□□□□□ -0.38
HMGXB3-201ENST00000502717 ADAMTS20P59510 1910 aa12.65□□□□□ -0.38
HMGXB3-201ENST00000502717 DCANP1Q8TF63 244 aa12.65□□□□□ -0.38
HMGXB3-201ENST00000502717 C4orf3Q8WVX3 66 aa12.65□□□□□ -0.38
HMGXB3-201ENST00000502717 BRK1Q8WUW1 75 aa12.64□□□□□ -0.39
HMGXB3-201ENST00000502717 SMIM9A6NGZ8 99 aa12.64□□□□□ -0.39
HMGXB3-201ENST00000502717 C2CD3Q4AC94 2353 aa12.63□□□□□ -0.39
HMGXB3-201ENST00000502717 ADAMTSL4-AS1Q5T5F5 129 aa12.63□□□□□ -0.39
HMGXB3-201ENST00000502717 ANKRD11Q6UB99 2663 aaPredicted RBP12.63□□□□□ -0.39
HMGXB3-201ENST00000502717 PRRC2AP48634 2157 aaKnown RBP12.63□□□□□ -0.39
HMGXB3-201ENST00000502717 TRBV7-7A0A0K0K1E9 115 aa12.63□□□□□ -0.39
HMGXB3-201ENST00000502717 UBE2BP63146 152 aa12.62□□□□□ -0.39
HMGXB3-201ENST00000502717 AMELXQ99217 191 aa12.62□□□□□ -0.39
HMGXB3-201ENST00000502717 DEFB105AQ8NG35 78 aa12.62□□□□□ -0.39
HMGXB3-201ENST00000502717 SMIM11BQ8TCY0 68 aa12.62□□□□□ -0.39
HMGXB3-201ENST00000502717 SPAG11BQ08648 103 aa12.62□□□□□ -0.39
HMGXB3-201ENST00000502717 HIGD2BQ4VC39 106 aa12.61□□□□□ -0.39
HMGXB3-201ENST00000502717 Q6ZSV7 163 aa12.61□□□□□ -0.39
HMGXB3-201ENST00000502717 CAMK2N2Q96S95 79 aa12.61□□□□□ -0.39
HMGXB3-201ENST00000502717 SBSPONQ8IVN8 264 aa12.61□□□□□ -0.39
HMGXB3-201ENST00000502717 DEFB135Q30KP9 77 aa12.61□□□□□ -0.39
HMGXB3-201ENST00000502717 NDUFC2-KCTD14E9PQ53 114 aa12.6□□□□□ -0.39
HMGXB3-201ENST00000502717 NDUFC1O43677 76 aa12.59□□□□□ -0.39
HMGXB3-201ENST00000502717 ABCA12Q86UK0 2595 aa12.59□□□□□ -0.39
HMGXB3-201ENST00000502717 SPTBN4Q9H254 2564 aa12.59□□□□□ -0.39
HMGXB3-201ENST00000502717 RPL28P46779 137 aaKnown RBP12.58□□□□□ -0.4
HMGXB3-201ENST00000502717 COX7BP24311 80 aa12.58□□□□□ -0.4
HMGXB3-201ENST00000502717 ZNF580Q9UK33 172 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms