RNA–Protein interactions for RNA: ENST00000502315.1

SH3RF1-202, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 487 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-202ENST00000502315 SRSF9Q13242 221 aaKnown RBP eCLIP4.49□□□□□ -1.69
SH3RF1-202ENST00000502315 TWIST1Q15672 202 aa4.49□□□□□ -1.69
SH3RF1-202ENST00000502315 AMMECR1LQ6DCA0 310 aa4.49□□□□□ -1.69
SH3RF1-202ENST00000502315 UQCC3Q6UW78 93 aa4.49□□□□□ -1.69
SH3RF1-202ENST00000502315 Q6ZRP5 223 aa4.49□□□□□ -1.69
SH3RF1-202ENST00000502315 STPG4Q8N801 248 aa4.49□□□□□ -1.69
SH3RF1-202ENST00000502315 CHCHD10Q8WYQ3 142 aaPredicted RBP4.49□□□□□ -1.69
SH3RF1-202ENST00000502315 ISOC2Q96AB3 205 aa4.49□□□□□ -1.69
SH3RF1-202ENST00000502315 TMEM101Q96IK0 257 aa4.49□□□□□ -1.69
SH3RF1-202ENST00000502315 BTF3L4Q96K17 158 aa4.49□□□□□ -1.69
SH3RF1-202ENST00000502315 TPPP3Q9BW30 176 aa4.49□□□□□ -1.69
SH3RF1-202ENST00000502315 GNG13Q9P2W3 67 aa4.49□□□□□ -1.69
SH3RF1-202ENST00000502315 TMEM218A2RU14 115 aa4.48□□□□□ -1.69
SH3RF1-202ENST00000502315 FAM231BA6NCW3 169 aa4.48□□□□□ -1.69
SH3RF1-202ENST00000502315 F8WDY8 70 aa4.48□□□□□ -1.69
SH3RF1-202ENST00000502315 I3L3M4 83 aa4.48□□□□□ -1.69
SH3RF1-202ENST00000502315 PPP1R17O96001 155 aa4.48□□□□□ -1.69
SH3RF1-202ENST00000502315 APCSP02743 223 aa4.48□□□□□ -1.69
SH3RF1-202ENST00000502315 MAJINQ3KP22 176 aa4.48□□□□□ -1.69
SH3RF1-202ENST00000502315 MRPL52Q86TS9 123 aaKnown RBP4.48□□□□□ -1.69
SH3RF1-202ENST00000502315 GATD1Q8NB37 220 aa4.48□□□□□ -1.69
SH3RF1-202ENST00000502315 NUDT10Q8NFP7 164 aa4.48□□□□□ -1.69
SH3RF1-202ENST00000502315 GTSF1Q8WW33 167 aa4.48□□□□□ -1.69
SH3RF1-202ENST00000502315 NUDT11Q96G61 164 aa4.48□□□□□ -1.69
SH3RF1-202ENST00000502315 EIF5A2Q9GZV4 153 aaKnown RBP4.48□□□□□ -1.69
SH3RF1-202ENST00000502315 GFRA4Q9GZZ7 299 aa4.48□□□□□ -1.69
SH3RF1-202ENST00000502315 CSDC2Q9Y534 153 aaKnown RBP4.48□□□□□ -1.69
SH3RF1-202ENST00000502315 SDHAF1A6NFY7 115 aa4.47□□□□□ -1.69
SH3RF1-202ENST00000502315 A8MWL6 223 aa4.47□□□□□ -1.69
SH3RF1-202ENST00000502315 SCO1O75880 301 aa4.47□□□□□ -1.69
SH3RF1-202ENST00000502315 SRP19P09132 144 aaKnown RBP4.47□□□□□ -1.69
SH3RF1-202ENST00000502315 CHTF8P0CG12 524 aa4.47□□□□□ -1.69
SH3RF1-202ENST00000502315 BCL2P10415 239 aa4.47□□□□□ -1.69
SH3RF1-202ENST00000502315 FGF6P10767 208 aa4.47□□□□□ -1.69
SH3RF1-202ENST00000502315 ESDP10768 282 aa4.47□□□□□ -1.69
SH3RF1-202ENST00000502315 SSTP61278 116 aa4.47□□□□□ -1.69
SH3RF1-202ENST00000502315 FOXI1Q12951 378 aa4.47□□□□□ -1.69
SH3RF1-202ENST00000502315 PEA15Q15121 130 aa4.47□□□□□ -1.69
SH3RF1-202ENST00000502315 SS18Q15532 418 aa4.47□□□□□ -1.69
SH3RF1-202ENST00000502315 CT83Q5H943 113 aa4.47□□□□□ -1.69
SH3RF1-202ENST00000502315 CD164L2Q6UWJ8 174 aa4.47□□□□□ -1.69
SH3RF1-202ENST00000502315 PRSS3P2Q8NHM4 247 aa4.47□□□□□ -1.69
SH3RF1-202ENST00000502315 TSKUQ8WUA8 353 aa4.47□□□□□ -1.69
SH3RF1-202ENST00000502315 RPP21Q9H633 154 aaKnown RBP4.47□□□□□ -1.69
SH3RF1-202ENST00000502315 TRBV27A0A0K0K1C4 114 aa4.46□□□□□ -1.7
SH3RF1-202ENST00000502315 LINC00959A0A1B0GUT2 108 aa4.46□□□□□ -1.7
SH3RF1-202ENST00000502315 C1orf196B1AJZ1 125 aa4.46□□□□□ -1.7
SH3RF1-202ENST00000502315 F8W036 122 aa4.46□□□□□ -1.7
SH3RF1-202ENST00000502315 TMEM250H0YL14 139 aa4.46□□□□□ -1.7
SH3RF1-202ENST00000502315 ZNF561-AS1K7EIQ3 104 aa4.46□□□□□ -1.7
SH3RF1-202ENST00000502315 TCAPO15273 167 aa4.46□□□□□ -1.7
SH3RF1-202ENST00000502315 APOC3P02656 99 aa4.46□□□□□ -1.7
SH3RF1-202ENST00000502315 PMCHP20382 165 aa4.46□□□□□ -1.7
SH3RF1-202ENST00000502315 CEBPGP53567 150 aa4.46□□□□□ -1.7
SH3RF1-202ENST00000502315 RNF151Q2KHN1 245 aa4.46□□□□□ -1.7
SH3RF1-202ENST00000502315 RNASEKQ6P5S7 137 aaKnown RBP4.46□□□□□ -1.7
SH3RF1-202ENST00000502315 FAM231DQ6ZW35 169 aa4.46□□□□□ -1.7
SH3RF1-202ENST00000502315 ZNF664Q8N3J9 261 aa4.46□□□□□ -1.7
SH3RF1-202ENST00000502315 MRAP2Q96G30 205 aa4.46□□□□□ -1.7
SH3RF1-202ENST00000502315 CARD19Q96LW7 228 aa4.46□□□□□ -1.7
SH3RF1-202ENST00000502315 TRBV20OR9-2A0A075B6H5 130 aa4.45□□□□□ -1.7
SH3RF1-202ENST00000502315 IGLV4-69A0A075B6H9 119 aa4.45□□□□□ -1.7
SH3RF1-202ENST00000502315 LOC107984640A0A0U1RRK4 108 aa4.45□□□□□ -1.7
SH3RF1-202ENST00000502315 SYCNQ0VAF6 134 aa4.45□□□□□ -1.7
SH3RF1-202ENST00000502315 C10orf91Q5T1B1 145 aa4.45□□□□□ -1.7
SH3RF1-202ENST00000502315 BORCS7Q96B45 105 aa4.45□□□□□ -1.7
SH3RF1-202ENST00000502315 C2orf48Q96LS8 159 aa4.45□□□□□ -1.7
SH3RF1-202ENST00000502315 ST20Q9HBF5 79 aa4.45□□□□□ -1.7
SH3RF1-202ENST00000502315 CDC42SE2Q9NRR3 84 aa4.45□□□□□ -1.7
SH3RF1-202ENST00000502315 CARHSP1Q9Y2V2 147 aaKnown RBP4.45□□□□□ -1.7
SH3RF1-202ENST00000502315 A0A096LNI7 61 aa4.44□□□□□ -1.7
SH3RF1-202ENST00000502315 IGKV2-24A0A0C4DH68 120 aa4.44□□□□□ -1.7
SH3RF1-202ENST00000502315 VCYO14598 125 aa4.44□□□□□ -1.7
SH3RF1-202ENST00000502315 APOMO95445 188 aa4.44□□□□□ -1.7
SH3RF1-202ENST00000502315 PTTG1IPP53801 180 aa4.44□□□□□ -1.7
SH3RF1-202ENST00000502315 POLR2KP53803 58 aaKnown RBP4.44□□□□□ -1.7
SH3RF1-202ENST00000502315 ODF1Q14990 250 aa4.44□□□□□ -1.7
SH3RF1-202ENST00000502315 HIGD2BQ4VC39 106 aa4.44□□□□□ -1.7
SH3RF1-202ENST00000502315 OCC1Q8TAD7 63 aa4.44□□□□□ -1.7
SH3RF1-202ENST00000502315 TMEM18Q96B42 140 aa4.44□□□□□ -1.7
SH3RF1-202ENST00000502315 SEC11CQ9BY50 192 aa4.44□□□□□ -1.7
SH3RF1-202ENST00000502315 TMEM191AQ9H0A3 160 aa4.44□□□□□ -1.7
SH3RF1-202ENST00000502315 PSORS1C2Q9UIG4 136 aa4.44□□□□□ -1.7
SH3RF1-202ENST00000502315 C7orf77A4D0Y5 90 aa4.43□□□□□ -1.7
SH3RF1-202ENST00000502315 PPP1R2P9O14990 202 aa4.43□□□□□ -1.7
SH3RF1-202ENST00000502315 XCL1P47992 114 aa4.43□□□□□ -1.7
SH3RF1-202ENST00000502315 CAMPP49913 170 aa4.43□□□□□ -1.7
SH3RF1-202ENST00000502315 TIMM21Q9BVV7 248 aa4.43□□□□□ -1.7
SH3RF1-202ENST00000502315 MRPL18Q9H0U6 180 aaKnown RBP4.43□□□□□ -1.7
SH3RF1-202ENST00000502315 SMDT1Q9H4I9 107 aa4.43□□□□□ -1.7
SH3RF1-202ENST00000502315 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.42□□□□□ -1.7
SH3RF1-202ENST00000502315 TRAV26-2A0A0B4J265 109 aa4.42□□□□□ -1.7
SH3RF1-202ENST00000502315 IGKV3OR2-268A0A0C4DH90 116 aa4.42□□□□□ -1.7
SH3RF1-202ENST00000502315 A0A1B0GUT8 65 aa4.42□□□□□ -1.7
SH3RF1-202ENST00000502315 IGKV2-29A2NJV5 120 aaPredicted RBP4.42□□□□□ -1.7
SH3RF1-202ENST00000502315 KRTAP9-7A8MTY7 169 aa4.42□□□□□ -1.7
SH3RF1-202ENST00000502315 K7EN84 100 aa4.42□□□□□ -1.7
SH3RF1-202ENST00000502315 COX7A2LO14548 114 aa4.42□□□□□ -1.7
SH3RF1-202ENST00000502315 GATCO43716 136 aaKnown RBP4.42□□□□□ -1.7
SH3RF1-202ENST00000502315 MALP21145 153 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms