RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	NUP35	Q8NFH5	326 aa		7	□□□□□ -1.29
CDK11A-222	ENST00000498810	PRR34	Q9NV39	138 aa		7	□□□□□ -1.29
CDK11A-222	ENST00000498810	TMEM242	Q9NWH2	141 aa		7	□□□□□ -1.29
CDK11A-222	ENST00000498810	PPP1R17	O96001	155 aa		6.99	□□□□□ -1.29
CDK11A-222	ENST00000498810	S100A8	P05109	93 aa		6.99	□□□□□ -1.29
CDK11A-222	ENST00000498810	CAMP	P49913	170 aa		6.99	□□□□□ -1.29
CDK11A-222	ENST00000498810		A0A1B0GW15	77 aa		6.98	□□□□□ -1.29
CDK11A-222	ENST00000498810	hDV102S1	A0JD36	115 aa		6.98	□□□□□ -1.29
CDK11A-222	ENST00000498810		C9JQL5	133 aa		6.98	□□□□□ -1.29
CDK11A-222	ENST00000498810		H7C423	109 aa		6.98	□□□□□ -1.29
CDK11A-222	ENST00000498810	FGF6	P10767	208 aa		6.98	□□□□□ -1.29
CDK11A-222	ENST00000498810	SMAGP	Q0VAQ4	97 aa		6.98	□□□□□ -1.29
CDK11A-222	ENST00000498810	MRPL54	Q6P161	138 aa	Known RBP	6.98	□□□□□ -1.29
CDK11A-222	ENST00000498810	OR5A1	Q8NGJ0	315 aa		6.98	□□□□□ -1.29
CDK11A-222	ENST00000498810	KIR2DL4	Q99706	377 aa		6.98	□□□□□ -1.29
CDK11A-222	ENST00000498810	ABCA13	Q86UQ4	5058 aa		6.98	□□□□□ -1.29
CDK11A-222	ENST00000498810	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	6.97	□□□□□ -1.29
CDK11A-222	ENST00000498810	TRBV6-5	A0A0K0K1A5	114 aa		6.97	□□□□□ -1.29
CDK11A-222	ENST00000498810	C7orf77	A4D0Y5	90 aa		6.97	□□□□□ -1.29
CDK11A-222	ENST00000498810		F8W036	122 aa		6.97	□□□□□ -1.29
CDK11A-222	ENST00000498810	SMKR1	H3BMG3	65 aa		6.97	□□□□□ -1.29
CDK11A-222	ENST00000498810	PPP1R2P9	O14990	202 aa		6.97	□□□□□ -1.29
CDK11A-222	ENST00000498810	ZNF25	P17030	456 aa	Predicted RBP	6.97	□□□□□ -1.29
CDK11A-222	ENST00000498810	RAB4A	P20338	218 aa		6.97	□□□□□ -1.29
CDK11A-222	ENST00000498810	DGAT2L7P	Q6IED9	249 aa		6.97	□□□□□ -1.29
CDK11A-222	ENST00000498810	CLRN3	Q8NCR9	226 aa		6.97	□□□□□ -1.29
CDK11A-222	ENST00000498810	SMIM27	A0A1W2PRY6	76 aa		6.96	□□□□□ -1.3
CDK11A-222	ENST00000498810	GAGE12H	A6NDE8	117 aa		6.96	□□□□□ -1.3
CDK11A-222	ENST00000498810	INAFM2	P0DMQ5	153 aa		6.96	□□□□□ -1.3
CDK11A-222	ENST00000498810	CKS2	P33552	79 aa		6.96	□□□□□ -1.3
CDK11A-222	ENST00000498810	RPS10	P46783	165 aa	Known RBP	6.96	□□□□□ -1.3
CDK11A-222	ENST00000498810	HBB	P68871	147 aa		6.96	□□□□□ -1.3
CDK11A-222	ENST00000498810	KRTAP15-1	Q3LI76	137 aa		6.96	□□□□□ -1.3
CDK11A-222	ENST00000498810	CFAP161	Q6P656	301 aa		6.96	□□□□□ -1.3
CDK11A-222	ENST00000498810	RNF185	Q96GF1	192 aa		6.96	□□□□□ -1.3
CDK11A-222	ENST00000498810	FAM30A	Q9NZY2	134 aa		6.96	□□□□□ -1.3
CDK11A-222	ENST00000498810	VCY	O14598	125 aa		6.95	□□□□□ -1.3
CDK11A-222	ENST00000498810	TSHB	P01222	138 aa		6.95	□□□□□ -1.3
CDK11A-222	ENST00000498810	PRSS1	P07477	247 aa		6.95	□□□□□ -1.3
CDK11A-222	ENST00000498810	SUMO2	P61956	95 aa	Known RBP	6.95	□□□□□ -1.3
CDK11A-222	ENST00000498810	TMEM18	Q96B42	140 aa		6.95	□□□□□ -1.3
CDK11A-222	ENST00000498810	GAS8-AS1	O95177	125 aa		6.94	□□□□□ -1.3
CDK11A-222	ENST00000498810	PNRC1	Q12796	327 aa	Predicted RBP	6.94	□□□□□ -1.3
CDK11A-222	ENST00000498810	SS18	Q15532	418 aa		6.94	□□□□□ -1.3
CDK11A-222	ENST00000498810	MRPL51	Q4U2R6	128 aa	Known RBP	6.94	□□□□□ -1.3
CDK11A-222	ENST00000498810	FAM104B	Q5XKR9	115 aa		6.94	□□□□□ -1.3
CDK11A-222	ENST00000498810	SCX	Q7RTU7	201 aa		6.94	□□□□□ -1.3
CDK11A-222	ENST00000498810	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	6.94	□□□□□ -1.3
CDK11A-222	ENST00000498810	TRBV27	A0A0K0K1C4	114 aa		6.93	□□□□□ -1.3
CDK11A-222	ENST00000498810	TCAP	O15273	167 aa		6.93	□□□□□ -1.3
CDK11A-222	ENST00000498810	MT-ND4L	P03901	98 aa		6.93	□□□□□ -1.3
CDK11A-222	ENST00000498810	XCL1	P47992	114 aa		6.93	□□□□□ -1.3
CDK11A-222	ENST00000498810	C21orf62-AS1	Q17RA5	79 aa		6.93	□□□□□ -1.3
CDK11A-222	ENST00000498810		Q6ZSA8	131 aa		6.93	□□□□□ -1.3
CDK11A-222	ENST00000498810	IGHV3-64	A0A075B6Q5	118 aa		6.92	□□□□□ -1.3
CDK11A-222	ENST00000498810	LINC00862	A6NCI5	91 aa		6.92	□□□□□ -1.3
CDK11A-222	ENST00000498810		D6R8Y8	96 aa		6.92	□□□□□ -1.3
CDK11A-222	ENST00000498810	POLR2K	P53803	58 aa	Known RBP	6.92	□□□□□ -1.3
CDK11A-222	ENST00000498810	HIGD2B	Q4VC39	106 aa		6.92	□□□□□ -1.3
CDK11A-222	ENST00000498810	ATP5L2	Q7Z4Y8	100 aa		6.92	□□□□□ -1.3
CDK11A-222	ENST00000498810	DPH3	Q96FX2	82 aa		6.92	□□□□□ -1.3
CDK11A-222	ENST00000498810	CHAC1	Q9BUX1	264 aa		6.92	□□□□□ -1.3
CDK11A-222	ENST00000498810	CCL25	O15444	150 aa		6.91	□□□□□ -1.3
CDK11A-222	ENST00000498810	ESD	P10768	282 aa		6.91	□□□□□ -1.3
CDK11A-222	ENST00000498810	KRTAP26-1	Q6PEX3	210 aa		6.91	□□□□□ -1.3
CDK11A-222	ENST00000498810	NRAC	Q8N912	160 aa		6.91	□□□□□ -1.3
CDK11A-222	ENST00000498810	C9orf163	Q8N9P6	203 aa		6.91	□□□□□ -1.3
CDK11A-222	ENST00000498810	C20orf78	Q9BR46	151 aa		6.91	□□□□□ -1.3
CDK11A-222	ENST00000498810	TNFRSF6B	O95407	300 aa		6.9	□□□□□ -1.3
CDK11A-222	ENST00000498810	PPBP	P02775	128 aa		6.9	□□□□□ -1.3
CDK11A-222	ENST00000498810	MAL	P21145	153 aa		6.9	□□□□□ -1.3
CDK11A-222	ENST00000498810	CNBP	P62633	177 aa	Known RBP	6.9	□□□□□ -1.3
CDK11A-222	ENST00000498810	CLLU1	Q5K131	121 aa		6.9	□□□□□ -1.3
CDK11A-222	ENST00000498810	MRPL52	Q86TS9	123 aa	Known RBP	6.9	□□□□□ -1.3
CDK11A-222	ENST00000498810	ORMDL3	Q8N138	153 aa		6.9	□□□□□ -1.3
CDK11A-222	ENST00000498810	ZNF664	Q8N3J9	261 aa		6.9	□□□□□ -1.3
CDK11A-222	ENST00000498810	SMIM2	Q9BVW6	85 aa		6.9	□□□□□ -1.3
CDK11A-222	ENST00000498810	LINC00959	A0A1B0GUT2	108 aa		6.89	□□□□□ -1.31
CDK11A-222	ENST00000498810	RAB5A	P20339	215 aa		6.89	□□□□□ -1.31
CDK11A-222	ENST00000498810	RNASE13	Q5GAN3	156 aa	Known RBP	6.89	□□□□□ -1.31
CDK11A-222	ENST00000498810	CIRBP-AS1	Q8TBR5	109 aa		6.89	□□□□□ -1.31
CDK11A-222	ENST00000498810	PRELID3A	Q96N28	172 aa		6.89	□□□□□ -1.31
CDK11A-222	ENST00000498810	PKIG	Q9Y2B9	76 aa		6.89	□□□□□ -1.31
CDK11A-222	ENST00000498810	TRAV13-1	A0A0B4J241	112 aa		6.88	□□□□□ -1.31
CDK11A-222	ENST00000498810	IGHV1-58	A0A0C4DH39	117 aa		6.88	□□□□□ -1.31
CDK11A-222	ENST00000498810		A0A1B0GXF2	115 aa		6.88	□□□□□ -1.31
CDK11A-222	ENST00000498810	NPY	P01303	97 aa		6.88	□□□□□ -1.31
CDK11A-222	ENST00000498810	C15orf56	Q8N910	161 aa		6.88	□□□□□ -1.31
CDK11A-222	ENST00000498810	CDC42SE2	Q9NRR3	84 aa		6.88	□□□□□ -1.31
CDK11A-222	ENST00000498810	DNAH8	Q96JB1	4490 aa		6.88	□□□□□ -1.31
CDK11A-222	ENST00000498810	C1orf196	B1AJZ1	125 aa		6.87	□□□□□ -1.31
CDK11A-222	ENST00000498810	PHOX2A	O14813	284 aa		6.87	□□□□□ -1.31
CDK11A-222	ENST00000498810	PTTG1IP	P53801	180 aa		6.87	□□□□□ -1.31
CDK11A-222	ENST00000498810	FOXI1	Q12951	378 aa		6.87	□□□□□ -1.31
CDK11A-222	ENST00000498810	UQCC3	Q6UW78	93 aa		6.87	□□□□□ -1.31
CDK11A-222	ENST00000498810	TMEM136	Q6ZRR5	245 aa		6.87	□□□□□ -1.31
CDK11A-222	ENST00000498810		Q6ZUT4	128 aa		6.87	□□□□□ -1.31
CDK11A-222	ENST00000498810	MAP1LC3A	Q9H492	121 aa		6.87	□□□□□ -1.31
CDK11A-222	ENST00000498810	UBE2D4	Q9Y2X8	147 aa		6.87	□□□□□ -1.31
CDK11A-222	ENST00000498810	FAT1	Q14517	4588 aa		6.87	□□□□□ -1.31

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms