RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 TPT1P13693 172 aaKnown RBP2.03□□□□□ -2.08
CSTF1-207ENST00000498689 HRES1P13985 223 aa2.03□□□□□ -2.08
CSTF1-207ENST00000498689 SSTP61278 116 aa2.03□□□□□ -2.08
CSTF1-207ENST00000498689 RPL32P62910 135 aaKnown RBP2.03□□□□□ -2.08
CSTF1-207ENST00000498689 GNGT1P63211 74 aa2.03□□□□□ -2.08
CSTF1-207ENST00000498689 SMUG1Q53HV7 270 aa2.03□□□□□ -2.08
CSTF1-207ENST00000498689 LCE3CQ5T5A8 94 aa2.03□□□□□ -2.08
CSTF1-207ENST00000498689 OR10AG1Q8NH19 301 aa2.03□□□□□ -2.08
CSTF1-207ENST00000498689 PSENENQ9NZ42 101 aa2.03□□□□□ -2.08
CSTF1-207ENST00000498689 PRYO14603 147 aa2.02□□□□□ -2.09
CSTF1-207ENST00000498689 MED6O75586 246 aa2.02□□□□□ -2.09
CSTF1-207ENST00000498689 UPK1BO75841 260 aa2.02□□□□□ -2.09
CSTF1-207ENST00000498689 CD3DP04234 171 aa2.02□□□□□ -2.09
CSTF1-207ENST00000498689 TGFBR1P36897 503 aa2.02□□□□□ -2.09
CSTF1-207ENST00000498689 TMBIM6P55061 237 aa2.02□□□□□ -2.09
CSTF1-207ENST00000498689 RBM3P98179 157 aaKnown RBP2.02□□□□□ -2.09
CSTF1-207ENST00000498689 COTL1Q14019 142 aa2.02□□□□□ -2.09
CSTF1-207ENST00000498689 SCGB2B2Q4G0G5 96 aa2.02□□□□□ -2.09
CSTF1-207ENST00000498689 RNASE13Q5GAN3 156 aaKnown RBP2.02□□□□□ -2.09
CSTF1-207ENST00000498689 FAAP20Q6NZ36 180 aa2.02□□□□□ -2.09
CSTF1-207ENST00000498689 HRCT1Q6UXD1 115 aa2.02□□□□□ -2.09
CSTF1-207ENST00000498689 TMEM14EPQ6UXP3 125 aa2.02□□□□□ -2.09
CSTF1-207ENST00000498689 FAM231DQ6ZW35 169 aa2.02□□□□□ -2.09
CSTF1-207ENST00000498689 URB1-AS1Q96HZ7 61 aa2.02□□□□□ -2.09
CSTF1-207ENST00000498689 SLC25A21Q9BQT8 299 aaPredicted RBP2.02□□□□□ -2.09
CSTF1-207ENST00000498689 TMEM126AQ9H061 195 aa2.02□□□□□ -2.09
CSTF1-207ENST00000498689 FAM107BQ9H098 131 aa2.02□□□□□ -2.09
CSTF1-207ENST00000498689 GPR132Q9UNW8 380 aa2.02□□□□□ -2.09
CSTF1-207ENST00000498689 CRIP1P50238 77 aa2.01□□□□□ -2.09
CSTF1-207ENST00000498689 MLLT11Q13015 90 aaPredicted RBP2.01□□□□□ -2.09
CSTF1-207ENST00000498689 KIAA0087Q14695 138 aa2.01□□□□□ -2.09
CSTF1-207ENST00000498689 IAH1Q2TAA2 248 aaPredicted RBP2.01□□□□□ -2.09
CSTF1-207ENST00000498689 LRRC37A5PQ49AS3 106 aa2.01□□□□□ -2.09
CSTF1-207ENST00000498689 SSBP3-AS1Q7Z2R9 100 aa2.01□□□□□ -2.09
CSTF1-207ENST00000498689 DYNC2LI1Q8TCX1 351 aa2.01□□□□□ -2.09
CSTF1-207ENST00000498689 NDFIP1Q9BT67 221 aa2.01□□□□□ -2.09
CSTF1-207ENST00000498689 IMUPQ9GZP8 106 aa2.01□□□□□ -2.09
CSTF1-207ENST00000498689 CDC42SE2Q9NRR3 84 aa2.01□□□□□ -2.09
CSTF1-207ENST00000498689 C14orf166Q9Y224 244 aaKnown RBP2.01□□□□□ -2.09
CSTF1-207ENST00000498689 ZNF727A8MUV8 499 aa2□□□□□ -2.09
CSTF1-207ENST00000498689 PTGES3LE9PB15 166 aa2□□□□□ -2.09
CSTF1-207ENST00000498689 M0R378 163 aa2□□□□□ -2.09
CSTF1-207ENST00000498689 SSSCA1O60232 199 aa2□□□□□ -2.09
CSTF1-207ENST00000498689 OR7C2O60412 319 aa2□□□□□ -2.09
CSTF1-207ENST00000498689 KRTAP5-8O75690 187 aa2□□□□□ -2.09
CSTF1-207ENST00000498689 GNAO1P09471 354 aa2□□□□□ -2.09
CSTF1-207ENST00000498689 OR5AL1P0C617 328 aa2□□□□□ -2.09
CSTF1-207ENST00000498689 RPL29P47914 159 aaKnown RBP2□□□□□ -2.09
CSTF1-207ENST00000498689 FOXA3P55318 350 aaPredicted RBP2□□□□□ -2.09
CSTF1-207ENST00000498689 CMTM2Q8TAZ6 248 aa2□□□□□ -2.09
CSTF1-207ENST00000498689 TIMM17AQ99595 171 aa2□□□□□ -2.09
CSTF1-207ENST00000498689 CCDC32Q9BV29 185 aa2□□□□□ -2.09
CSTF1-207ENST00000498689 GNB1LQ9BYB4 327 aa2□□□□□ -2.09
CSTF1-207ENST00000498689 OTORQ9NRC9 128 aa2□□□□□ -2.09
CSTF1-207ENST00000498689 LYRM2Q9NU23 88 aaPredicted RBP2□□□□□ -2.09
CSTF1-207ENST00000498689 MED9Q9NWA0 146 aa2□□□□□ -2.09
CSTF1-207ENST00000498689 RSL24D1Q9UHA3 163 aaKnown RBP2□□□□□ -2.09
CSTF1-207ENST00000498689 TRAV34A0A0B4J273 112 aa1.99□□□□□ -2.09
CSTF1-207ENST00000498689 TRBV30A0A0K0K1B3 111 aa1.99□□□□□ -2.09
CSTF1-207ENST00000498689 TRDV1A0A1B0GX56 115 aa1.99□□□□□ -2.09
CSTF1-207ENST00000498689 FABP5P3A8MUU1 101 aa1.99□□□□□ -2.09
CSTF1-207ENST00000498689 C1orf196B1AJZ1 125 aa1.99□□□□□ -2.09
CSTF1-207ENST00000498689 F8WDY8 70 aa1.99□□□□□ -2.09
CSTF1-207ENST00000498689 MGPP08493 103 aa1.99□□□□□ -2.09
CSTF1-207ENST00000498689 UBE2L3P68036 154 aaKnown RBP1.99□□□□□ -2.09
CSTF1-207ENST00000498689 LINC00483Q53H64 154 aa1.99□□□□□ -2.09
CSTF1-207ENST00000498689 RNASE10Q5GAN6 216 aaKnown RBP1.99□□□□□ -2.09
CSTF1-207ENST00000498689 SNX29P2Q8IUI4 249 aa1.99□□□□□ -2.09
CSTF1-207ENST00000498689 PYDC1Q8WXC3 89 aa1.99□□□□□ -2.09
CSTF1-207ENST00000498689 GEMIN7Q9H840 131 aaKnown RBP1.99□□□□□ -2.09
CSTF1-207ENST00000498689 CYTL1Q9NRR1 136 aa1.99□□□□□ -2.09
CSTF1-207ENST00000498689 TRAV13-1A0A0B4J241 112 aa1.98□□□□□ -2.09
CSTF1-207ENST00000498689 LOC107984156A0A0G2JMH3 177 aa1.98□□□□□ -2.09
CSTF1-207ENST00000498689 KRTAP16-1A8MUX0 517 aa1.98□□□□□ -2.09
CSTF1-207ENST00000498689 SH2D1AO60880 128 aa1.98□□□□□ -2.09
CSTF1-207ENST00000498689 ATP6V1G2O95670 118 aa1.98□□□□□ -2.09
CSTF1-207ENST00000498689 ZNF25P17030 456 aaPredicted RBP1.98□□□□□ -2.09
CSTF1-207ENST00000498689 CALB2P22676 271 aa1.98□□□□□ -2.09
CSTF1-207ENST00000498689 SDC2P34741 201 aa1.98□□□□□ -2.09
CSTF1-207ENST00000498689 GAGE2AQ6NT46 116 aa1.98□□□□□ -2.09
CSTF1-207ENST00000498689 Q75L30 129 aa1.98□□□□□ -2.09
CSTF1-207ENST00000498689 LINC01551Q86U37 167 aa1.98□□□□□ -2.09
CSTF1-207ENST00000498689 ARL17AQ8IVW1 177 aa1.98□□□□□ -2.09
CSTF1-207ENST00000498689 S100A16Q96FQ6 103 aaKnown RBP1.98□□□□□ -2.09
CSTF1-207ENST00000498689 SMIM8Q96KF7 97 aa1.98□□□□□ -2.09
CSTF1-207ENST00000498689 TXNL4BQ9NX01 149 aaKnown RBP1.98□□□□□ -2.09
CSTF1-207ENST00000498689 EXTL2Q9UBQ6 330 aa1.98□□□□□ -2.09
CSTF1-207ENST00000498689 WDR83OSQ9Y284 106 aa1.98□□□□□ -2.09
CSTF1-207ENST00000498689 UBE2L5PA0A1B0GUS4 154 aa1.97□□□□□ -2.09
CSTF1-207ENST00000498689 H3BMQ9 156 aa1.97□□□□□ -2.09
CSTF1-207ENST00000498689 H7C423 109 aa1.97□□□□□ -2.09
CSTF1-207ENST00000498689 SLC25A6P12236 298 aa1.97□□□□□ -2.09
CSTF1-207ENST00000498689 TAGLN2P37802 199 aaKnown RBP1.97□□□□□ -2.09
CSTF1-207ENST00000498689 FLI1Q01543 452 aaPredicted RBP1.97□□□□□ -2.09
CSTF1-207ENST00000498689 C1orf195Q5TG92 126 aa1.97□□□□□ -2.09
CSTF1-207ENST00000498689 RASL11AQ6T310 242 aa1.97□□□□□ -2.09
CSTF1-207ENST00000498689 FAM19A3Q7Z5A8 133 aa1.97□□□□□ -2.09
CSTF1-207ENST00000498689 TMEM101Q96IK0 257 aa1.97□□□□□ -2.09
CSTF1-207ENST00000498689 BTF3L4Q96K17 158 aa1.97□□□□□ -2.09
CSTF1-207ENST00000498689 ALKBH7Q9BT30 221 aaPredicted RBP1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms