RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 SRRM2Q9UQ35 2752 aaKnown RBP10.35□□□□□ -0.75
NR1H3-227ENST00000498548 SDIM1Q6ZPB5 146 aa10.35□□□□□ -0.75
NR1H3-227ENST00000498548 CHCHD10Q8WYQ3 142 aaPredicted RBP10.35□□□□□ -0.75
NR1H3-227ENST00000498548 HIGD2BQ4VC39 106 aa10.34□□□□□ -0.75
NR1H3-227ENST00000498548 C15orf56Q8N910 161 aa10.34□□□□□ -0.75
NR1H3-227ENST00000498548 AP5S1Q9NUS5 200 aa10.34□□□□□ -0.75
NR1H3-227ENST00000498548 SMIM27A0A1W2PRY6 76 aa10.33□□□□□ -0.76
NR1H3-227ENST00000498548 C7orf77A4D0Y5 90 aa10.33□□□□□ -0.76
NR1H3-227ENST00000498548 CAMPP49913 170 aa10.33□□□□□ -0.76
NR1H3-227ENST00000498548 KRTAP10-4P60372 401 aaPredicted RBP10.33□□□□□ -0.76
NR1H3-227ENST00000498548 CNBPP62633 177 aaKnown RBP10.33□□□□□ -0.76
NR1H3-227ENST00000498548 RHEBQ15382 184 aa10.33□□□□□ -0.76
NR1H3-227ENST00000498548 MRPL51Q4U2R6 128 aaKnown RBP10.33□□□□□ -0.76
NR1H3-227ENST00000498548 LCE2DQ5TA82 110 aaPredicted RBP10.33□□□□□ -0.76
NR1H3-227ENST00000498548 NRACQ8N912 160 aa10.33□□□□□ -0.76
NR1H3-227ENST00000498548 OR5A1Q8NGJ0 315 aa10.33□□□□□ -0.76
NR1H3-227ENST00000498548 TMEM101Q96IK0 257 aa10.33□□□□□ -0.76
NR1H3-227ENST00000498548 BTF3L4Q96K17 158 aa10.33□□□□□ -0.76
NR1H3-227ENST00000498548 TRBV27A0A0K0K1C4 114 aa10.32□□□□□ -0.76
NR1H3-227ENST00000498548 SMCO4Q9NRQ5 59 aa10.32□□□□□ -0.76
NR1H3-227ENST00000498548 HERC1Q15751 4861 aa10.31□□□□□ -0.76
NR1H3-227ENST00000498548 LINC00959A0A1B0GUT2 108 aa10.31□□□□□ -0.76
NR1H3-227ENST00000498548 VCYO14598 125 aa10.31□□□□□ -0.76
NR1H3-227ENST00000498548 ZNF25P17030 456 aaPredicted RBP10.31□□□□□ -0.76
NR1H3-227ENST00000498548 XCL1P47992 114 aa10.31□□□□□ -0.76
NR1H3-227ENST00000498548 FOXI1Q12951 378 aa10.31□□□□□ -0.76
NR1H3-227ENST00000498548 FAM104BQ5XKR9 115 aa10.31□□□□□ -0.76
NR1H3-227ENST00000498548 CFAP161Q6P656 301 aa10.31□□□□□ -0.76
NR1H3-227ENST00000498548 IGHV3-64A0A075B6Q5 118 aa10.3□□□□□ -0.76
NR1H3-227ENST00000498548 CHTF8P0CG12 524 aa10.3□□□□□ -0.76
NR1H3-227ENST00000498548 FCER1GP30273 86 aa10.3□□□□□ -0.76
NR1H3-227ENST00000498548 PNRC1Q12796 327 aaPredicted RBP10.3□□□□□ -0.76
NR1H3-227ENST00000498548 MRPL54Q6P161 138 aaKnown RBP10.3□□□□□ -0.76
NR1H3-227ENST00000498548 CBLN2Q8IUK8 224 aa10.3□□□□□ -0.76
NR1H3-227ENST00000498548 DPH3Q96FX2 82 aa10.3□□□□□ -0.76
NR1H3-227ENST00000498548 RPS10P5Q9NQ39 176 aa10.3□□□□□ -0.76
NR1H3-227ENST00000498548 CDC42SE2Q9NRR3 84 aa10.3□□□□□ -0.76
NR1H3-227ENST00000498548 PKHD1L1Q86WI1 4243 aa10.3□□□□□ -0.76
NR1H3-227ENST00000498548 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.29□□□□□ -0.76
NR1H3-227ENST00000498548 J3QL48 77 aa10.29□□□□□ -0.76
NR1H3-227ENST00000498548 CCL25O15444 150 aa10.29□□□□□ -0.76
NR1H3-227ENST00000498548 SUMO2P61956 95 aaKnown RBP10.29□□□□□ -0.76
NR1H3-227ENST00000498548 COLCA2A8K830 154 aa10.28□□□□□ -0.76
NR1H3-227ENST00000498548 RPL37AP61513 92 aaKnown RBP10.28□□□□□ -0.76
NR1H3-227ENST00000498548 RNASE13Q5GAN3 156 aaKnown RBP10.28□□□□□ -0.76
NR1H3-227ENST00000498548 MRPL52Q86TS9 123 aaKnown RBP10.28□□□□□ -0.76
NR1H3-227ENST00000498548 ZNF664Q8N3J9 261 aa10.28□□□□□ -0.76
NR1H3-227ENST00000498548 LINC00526Q96FQ7 95 aa10.28□□□□□ -0.76
NR1H3-227ENST00000498548 PPP1R17O96001 155 aa10.27□□□□□ -0.77
NR1H3-227ENST00000498548 CKS2P33552 79 aa10.27□□□□□ -0.77
NR1H3-227ENST00000498548 YPEL4Q96NS1 127 aa10.27□□□□□ -0.77
NR1H3-227ENST00000498548 COX6A2Q02221 97 aa10.26□□□□□ -0.77
NR1H3-227ENST00000498548 SS18Q15532 418 aa10.26□□□□□ -0.77
NR1H3-227ENST00000498548 KIR2DL4Q99706 377 aa10.26□□□□□ -0.77
NR1H3-227ENST00000498548 TMA7Q9Y2S6 64 aaKnown RBP10.26□□□□□ -0.77
NR1H3-227ENST00000498548 A0A087WYN8 130 aa10.25□□□□□ -0.77
NR1H3-227ENST00000498548 PPP1R2P9O14990 202 aa10.25□□□□□ -0.77
NR1H3-227ENST00000498548 CIRBPQ14011 172 aaKnown RBP10.25□□□□□ -0.77
NR1H3-227ENST00000498548 PRSS3P2Q8NHM4 247 aa10.25□□□□□ -0.77
NR1H3-227ENST00000498548 UBE2D4Q9Y2X8 147 aa10.25□□□□□ -0.77
NR1H3-227ENST00000498548 GVQW2A0A096LPI5 108 aaPredicted RBP10.24□□□□□ -0.77
NR1H3-227ENST00000498548 A0A1B0GW15 77 aa10.24□□□□□ -0.77
NR1H3-227ENST00000498548 A0A1B0GXF2 115 aa10.24□□□□□ -0.77
NR1H3-227ENST00000498548 KRTAP29-1A8MX34 341 aaPredicted RBP10.24□□□□□ -0.77
NR1H3-227ENST00000498548 D6R8Y8 96 aa10.24□□□□□ -0.77
NR1H3-227ENST00000498548 TNFRSF6BO95407 300 aa10.24□□□□□ -0.77
NR1H3-227ENST00000498548 HNRNPA3P51991 378 aaKnown RBP10.24□□□□□ -0.77
NR1H3-227ENST00000498548 HBBP68871 147 aa10.24□□□□□ -0.77
NR1H3-227ENST00000498548 CTDSP1Q9GZU7 261 aa10.24□□□□□ -0.77
NR1H3-227ENST00000498548 FAT3Q8TDW7 4589 aa10.23□□□□□ -0.77
NR1H3-227ENST00000498548 NPYP01303 97 aa10.23□□□□□ -0.77
NR1H3-227ENST00000498548 SPACA4Q8TDM5 124 aa10.23□□□□□ -0.77
NR1H3-227ENST00000498548 C20orf78Q9BR46 151 aa10.23□□□□□ -0.77
NR1H3-227ENST00000498548 LRP1Q07954 4544 aaKnown RBP10.23□□□□□ -0.77
NR1H3-227ENST00000498548 DMBT1Q9UGM3 2413 aaPredicted RBP10.23□□□□□ -0.77
NR1H3-227ENST00000498548 TRBV24-1A0A075B6N3 115 aa10.22□□□□□ -0.77
NR1H3-227ENST00000498548 IGHV1-58A0A0C4DH39 117 aa10.22□□□□□ -0.77
NR1H3-227ENST00000498548 IGKV2-24A0A0C4DH68 120 aa10.22□□□□□ -0.77
NR1H3-227ENST00000498548 MT-ND4LP03901 98 aa10.22□□□□□ -0.77
NR1H3-227ENST00000498548 RPL39P62891 51 aaKnown RBP10.22□□□□□ -0.77
NR1H3-227ENST00000498548 CD164L2Q6UWJ8 174 aa10.22□□□□□ -0.77
NR1H3-227ENST00000498548 Q6ZUT4 128 aa10.22□□□□□ -0.77
NR1H3-227ENST00000498548 TRAV13-1A0A0B4J241 112 aa10.21□□□□□ -0.77
NR1H3-227ENST00000498548 TCAPO15273 167 aa10.21□□□□□ -0.77
NR1H3-227ENST00000498548 S100A8P05109 93 aa10.21□□□□□ -0.77
NR1H3-227ENST00000498548 MAJINQ3KP22 176 aa10.21□□□□□ -0.77
NR1H3-227ENST00000498548 ANAPC16Q96DE5 110 aa10.2□□□□□ -0.78
NR1H3-227ENST00000498548 SMIM2Q9BVW6 85 aa10.2□□□□□ -0.78
NR1H3-227ENST00000498548 CSDC2Q9Y534 153 aaKnown RBP10.2□□□□□ -0.78
NR1H3-227ENST00000498548 C1orf196B1AJZ1 125 aa10.19□□□□□ -0.78
NR1H3-227ENST00000498548 RPL32P62910 135 aaKnown RBP10.19□□□□□ -0.78
NR1H3-227ENST00000498548 SMAGPQ0VAQ4 97 aa10.19□□□□□ -0.78
NR1H3-227ENST00000498548 C5orf38Q86SI9 138 aa10.19□□□□□ -0.78
NR1H3-227ENST00000498548 TMEM18Q96B42 140 aa10.19□□□□□ -0.78
NR1H3-227ENST00000498548 OPRPNQ99935 248 aaPredicted RBP10.19□□□□□ -0.78
NR1H3-227ENST00000498548 PLAC8Q9NZF1 115 aa10.19□□□□□ -0.78
NR1H3-227ENST00000498548 A0A096LNI7 61 aa10.18□□□□□ -0.78
NR1H3-227ENST00000498548 LOC105371267A0A1B0GV96 52 aa10.18□□□□□ -0.78
NR1H3-227ENST00000498548 ZNF561-AS1K7EIQ3 104 aa10.18□□□□□ -0.78
NR1H3-227ENST00000498548 MALP21145 153 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms