RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 H7C423 109 aa7.74□□□□□ -1.17
THBS3-209ENST00000498500 LCE2BO14633 110 aa7.74□□□□□ -1.17
THBS3-209ENST00000498500 FGF6P10767 208 aa7.74□□□□□ -1.17
THBS3-209ENST00000498500 CAMPP49913 170 aa7.74□□□□□ -1.17
THBS3-209ENST00000498500 Q6ZRU5 148 aa7.74□□□□□ -1.17
THBS3-209ENST00000498500 TNXBP22105 4242 aa7.73□□□□□ -1.17
THBS3-209ENST00000498500 PRSS1P07477 247 aa7.73□□□□□ -1.17
THBS3-209ENST00000498500 PMCHP20382 165 aa7.73□□□□□ -1.17
THBS3-209ENST00000498500 HBBP68871 147 aa7.73□□□□□ -1.17
THBS3-209ENST00000498500 PNRC1Q12796 327 aaPredicted RBP7.73□□□□□ -1.17
THBS3-209ENST00000498500 NDUFA5Q16718 116 aa7.73□□□□□ -1.17
THBS3-209ENST00000498500 TRAV8-4A0A0B4J246 113 aa7.72□□□□□ -1.17
THBS3-209ENST00000498500 SUMO2P61956 95 aaKnown RBP7.72□□□□□ -1.17
THBS3-209ENST00000498500 AMMECR1LQ6DCA0 310 aa7.72□□□□□ -1.17
THBS3-209ENST00000498500 SLC7A5P1Q8MH63 180 aa7.72□□□□□ -1.17
THBS3-209ENST00000498500 PPP1R2P9O14990 202 aa7.71□□□□□ -1.18
THBS3-209ENST00000498500 ZNF25P17030 456 aaPredicted RBP7.71□□□□□ -1.18
THBS3-209ENST00000498500 RNASEKQ6P5S7 137 aaKnown RBP7.71□□□□□ -1.18
THBS3-209ENST00000498500 ATP5L2Q7Z4Y8 100 aa7.71□□□□□ -1.18
THBS3-209ENST00000498500 MRPL52Q86TS9 123 aaKnown RBP7.71□□□□□ -1.18
THBS3-209ENST00000498500 TRBV24-1A0A075B6N3 115 aa7.7□□□□□ -1.18
THBS3-209ENST00000498500 IGKV3OR2-268A0A0C4DH90 116 aa7.7□□□□□ -1.18
THBS3-209ENST00000498500 C7orf77A4D0Y5 90 aa7.7□□□□□ -1.18
THBS3-209ENST00000498500 D6R8Y8 96 aa7.7□□□□□ -1.18
THBS3-209ENST00000498500 PPP1R17O96001 155 aa7.7□□□□□ -1.18
THBS3-209ENST00000498500 S100A8P05109 93 aa7.7□□□□□ -1.18
THBS3-209ENST00000498500 S100A1P23297 94 aa7.7□□□□□ -1.18
THBS3-209ENST00000498500 RPL32P62910 135 aaKnown RBP7.7□□□□□ -1.18
THBS3-209ENST00000498500 C15orf56Q8N910 161 aa7.7□□□□□ -1.18
THBS3-209ENST00000498500 VCYO14598 125 aa7.69□□□□□ -1.18
THBS3-209ENST00000498500 ATP6V1G1O75348 118 aa7.69□□□□□ -1.18
THBS3-209ENST00000498500 TNFRSF6BO95407 300 aa7.69□□□□□ -1.18
THBS3-209ENST00000498500 NPYP01303 97 aa7.69□□□□□ -1.18
THBS3-209ENST00000498500 UQCC3Q6UW78 93 aa7.69□□□□□ -1.18
THBS3-209ENST00000498500 OR5A1Q8NGJ0 315 aa7.69□□□□□ -1.18
THBS3-209ENST00000498500 CHCHD10Q8WYQ3 142 aaPredicted RBP7.69□□□□□ -1.18
THBS3-209ENST00000498500 ANAPC16Q96DE5 110 aa7.69□□□□□ -1.18
THBS3-209ENST00000498500 C20orf78Q9BR46 151 aa7.69□□□□□ -1.18
THBS3-209ENST00000498500 SMIM2Q9BVW6 85 aa7.69□□□□□ -1.18
THBS3-209ENST00000498500 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.69□□□□□ -1.18
THBS3-209ENST00000498500 GAGE12HA6NDE8 117 aa7.68□□□□□ -1.18
THBS3-209ENST00000498500 F8W036 122 aa7.68□□□□□ -1.18
THBS3-209ENST00000498500 MT-ND4LP03901 98 aa7.68□□□□□ -1.18
THBS3-209ENST00000498500 CKS2P33552 79 aa7.68□□□□□ -1.18
THBS3-209ENST00000498500 DGAT2L7PQ6IED9 249 aa7.68□□□□□ -1.18
THBS3-209ENST00000498500 C9orf163Q8N9P6 203 aa7.68□□□□□ -1.18
THBS3-209ENST00000498500 TMEM218A2RU14 115 aa7.67□□□□□ -1.18
THBS3-209ENST00000498500 PHOX2AO14813 284 aa7.67□□□□□ -1.18
THBS3-209ENST00000498500 FCER1GP30273 86 aa7.67□□□□□ -1.18
THBS3-209ENST00000498500 CNBPP62633 177 aaKnown RBP7.67□□□□□ -1.18
THBS3-209ENST00000498500 FOXI1Q12951 378 aa7.67□□□□□ -1.18
THBS3-209ENST00000498500 CLRN3Q8NCR9 226 aa7.67□□□□□ -1.18
THBS3-209ENST00000498500 CDC42SE2Q9NRR3 84 aa7.67□□□□□ -1.18
THBS3-209ENST00000498500 UBE2D4Q9Y2X8 147 aa7.67□□□□□ -1.18
THBS3-209ENST00000498500 LINC00959A0A1B0GUT2 108 aa7.66□□□□□ -1.18
THBS3-209ENST00000498500 PANO1I0J062 215 aa7.66□□□□□ -1.18
THBS3-209ENST00000498500 PPBPP02775 128 aa7.66□□□□□ -1.18
THBS3-209ENST00000498500 SLPIP03973 132 aa7.66□□□□□ -1.18
THBS3-209ENST00000498500 DPH3Q96FX2 82 aa7.66□□□□□ -1.18
THBS3-209ENST00000498500 TMEM101Q96IK0 257 aa7.66□□□□□ -1.18
THBS3-209ENST00000498500 BTF3L4Q96K17 158 aa7.66□□□□□ -1.18
THBS3-209ENST00000498500 KIR2DL4Q99706 377 aa7.66□□□□□ -1.18
THBS3-209ENST00000498500 hDV102S1A0JD36 115 aa7.65□□□□□ -1.18
THBS3-209ENST00000498500 Q6ZUT4 128 aa7.65□□□□□ -1.18
THBS3-209ENST00000498500 ORMDL3Q8N138 153 aa7.65□□□□□ -1.18
THBS3-209ENST00000498500 ZNF664Q8N3J9 261 aa7.65□□□□□ -1.18
THBS3-209ENST00000498500 FAM104AQ969W3 186 aa7.65□□□□□ -1.18
THBS3-209ENST00000498500 CSDC2Q9Y534 153 aaKnown RBP7.65□□□□□ -1.18
THBS3-209ENST00000498500 CCL25O15444 150 aa7.64□□□□□ -1.19
THBS3-209ENST00000498500 RPL39P62891 51 aaKnown RBP7.64□□□□□ -1.19
THBS3-209ENST00000498500 RNASE13Q5GAN3 156 aaKnown RBP7.64□□□□□ -1.19
THBS3-209ENST00000498500 PRELID3AQ96N28 172 aa7.64□□□□□ -1.19
THBS3-209ENST00000498500 TIMM21Q9BVV7 248 aa7.64□□□□□ -1.19
THBS3-209ENST00000498500 GVQW2A0A096LPI5 108 aaPredicted RBP7.63□□□□□ -1.19
THBS3-209ENST00000498500 TCAPO15273 167 aa7.63□□□□□ -1.19
THBS3-209ENST00000498500 XCL1P47992 114 aa7.63□□□□□ -1.19
THBS3-209ENST00000498500 HIGD2BQ4VC39 106 aa7.63□□□□□ -1.19
THBS3-209ENST00000498500 C10orf91Q5T1B1 145 aa7.63□□□□□ -1.19
THBS3-209ENST00000498500 SDIM1Q6ZPB5 146 aa7.63□□□□□ -1.19
THBS3-209ENST00000498500 TMEM136Q6ZRR5 245 aa7.63□□□□□ -1.19
THBS3-209ENST00000498500 IMMP2LQ96T52 175 aa7.63□□□□□ -1.19
THBS3-209ENST00000498500 SEC11CQ9BY50 192 aa7.63□□□□□ -1.19
THBS3-209ENST00000498500 ODF1Q14990 250 aa7.62□□□□□ -1.19
THBS3-209ENST00000498500 PRSS47A8MTI9 375 aa7.61□□□□□ -1.19
THBS3-209ENST00000498500 CIRBPQ14011 172 aaKnown RBP7.61□□□□□ -1.19
THBS3-209ENST00000498500 CFAP161Q6P656 301 aa7.61□□□□□ -1.19
THBS3-209ENST00000498500 CD164L2Q6UWJ8 174 aa7.61□□□□□ -1.19
THBS3-209ENST00000498500 TMEM18Q96B42 140 aa7.61□□□□□ -1.19
THBS3-209ENST00000498500 CTDSP1Q9GZU7 261 aa7.61□□□□□ -1.19
THBS3-209ENST00000498500 SPANXA1Q9NS26 97 aa7.61□□□□□ -1.19
THBS3-209ENST00000498500 AP5S1Q9NUS5 200 aa7.61□□□□□ -1.19
THBS3-209ENST00000498500 LAMTOR2Q9Y2Q5 125 aa7.61□□□□□ -1.19
THBS3-209ENST00000498500 A0A087WYN8 130 aa7.6□□□□□ -1.19
THBS3-209ENST00000498500 SMAGPQ0VAQ4 97 aa7.6□□□□□ -1.19
THBS3-209ENST00000498500 SS18Q15532 418 aa7.6□□□□□ -1.19
THBS3-209ENST00000498500 LINC01600Q96MT4 127 aa7.6□□□□□ -1.19
THBS3-209ENST00000498500 CARHSP1Q9Y2V2 147 aaKnown RBP7.6□□□□□ -1.19
THBS3-209ENST00000498500 IGHV3-64A0A075B6Q5 118 aa7.59□□□□□ -1.19
THBS3-209ENST00000498500 TRAV9-1A0A075B6T8 112 aa7.59□□□□□ -1.19
THBS3-209ENST00000498500 IGHV1-58A0A0C4DH39 117 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms