RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 UBE2D4Q9Y2X8 147 aa8.55□□□□□ -1.04
PBX1-211ENST00000498497 IGHV1-69DA0A0B4J2H0 117 aa8.55□□□□□ -1.04
PBX1-211ENST00000498497 IGKV3OR2-268A0A0C4DH90 116 aa8.55□□□□□ -1.04
PBX1-211ENST00000498497 SCXQ7RTU7 201 aa8.55□□□□□ -1.04
PBX1-211ENST00000498497 H7BZZ5 65 aa8.54□□□□□ -1.04
PBX1-211ENST00000498497 BUB3O43684 328 aa8.54□□□□□ -1.04
PBX1-211ENST00000498497 POLR2KP53803 58 aaKnown RBP8.54□□□□□ -1.04
PBX1-211ENST00000498497 LINC00308Q8TCZ7 52 aa8.54□□□□□ -1.04
PBX1-211ENST00000498497 IGHV1-58A0A0C4DH39 117 aa8.54□□□□□ -1.04
PBX1-211ENST00000498497 PRM2P04554 102 aa8.54□□□□□ -1.04
PBX1-211ENST00000498497 HAMPP81172 84 aa8.54□□□□□ -1.04
PBX1-211ENST00000498497 Q96MF0 132 aa8.54□□□□□ -1.04
PBX1-211ENST00000498497 MOB4Q9Y3A3 225 aa8.54□□□□□ -1.04
PBX1-211ENST00000498497 SMIM26A0A096LP01 95 aa8.53□□□□□ -1.04
PBX1-211ENST00000498497 NDUFC2O95298 119 aa8.53□□□□□ -1.04
PBX1-211ENST00000498497 COX8CQ7Z4L0 72 aa8.53□□□□□ -1.04
PBX1-211ENST00000498497 ITPR1Q14643 2758 aa8.53□□□□□ -1.04
PBX1-211ENST00000498497 IGLV3-9A0A075B6K5 115 aa8.53□□□□□ -1.04
PBX1-211ENST00000498497 LY6HO94772 140 aa8.53□□□□□ -1.04
PBX1-211ENST00000498497 PSMB8P28062 276 aa8.53□□□□□ -1.04
PBX1-211ENST00000498497 G3V318 75 aa8.52□□□□□ -1.05
PBX1-211ENST00000498497 IGHG3P01860 377 aa8.52□□□□□ -1.05
PBX1-211ENST00000498497 DAD1P61803 113 aa8.52□□□□□ -1.05
PBX1-211ENST00000498497 TOMM7Q9P0U1 55 aa8.52□□□□□ -1.05
PBX1-211ENST00000498497 PPP1R17O96001 155 aa8.52□□□□□ -1.05
PBX1-211ENST00000498497 VSIG2Q96IQ7 327 aa8.52□□□□□ -1.05
PBX1-211ENST00000498497 CSPG4Q6UVK1 2322 aa8.52□□□□□ -1.05
PBX1-211ENST00000498497 CCKP06307 115 aa8.51□□□□□ -1.05
PBX1-211ENST00000498497 Q6ZTI0 123 aa8.51□□□□□ -1.05
PBX1-211ENST00000498497 SPANXCQ9NY87 97 aa8.51□□□□□ -1.05
PBX1-211ENST00000498497 ZFAND2AQ8N6M9 145 aa8.51□□□□□ -1.05
PBX1-211ENST00000498497 C20orf203Q8NBC4 194 aa8.51□□□□□ -1.05
PBX1-211ENST00000498497 LY6G5BQ8NDX9 201 aa8.51□□□□□ -1.05
PBX1-211ENST00000498497 SOCS3O14543 225 aa8.51□□□□□ -1.05
PBX1-211ENST00000498497 Q6JHZ5 121 aa8.51□□□□□ -1.05
PBX1-211ENST00000498497 C11orf68Q9H3H3 251 aaKnown RBP8.51□□□□□ -1.05
PBX1-211ENST00000498497 JMJD1CQ15652 2540 aa8.51□□□□□ -1.05
PBX1-211ENST00000498497 TLN1Q9Y490 2541 aaKnown RBP8.5□□□□□ -1.05
PBX1-211ENST00000498497 IGLV11-55A0A075B6I3 123 aa8.5□□□□□ -1.05
PBX1-211ENST00000498497 MIR7-3HGQ8N6C7 128 aa8.5□□□□□ -1.05
PBX1-211ENST00000498497 ANKHD1Q8IWZ3 2542 aaKnown RBP8.5□□□□□ -1.05
PBX1-211ENST00000498497 NDUFC2-KCTD14E9PQ53 114 aa8.5□□□□□ -1.05
PBX1-211ENST00000498497 RPL36AP83881 106 aaKnown RBP8.5□□□□□ -1.05
PBX1-211ENST00000498497 PMAIP1Q13794 54 aa8.5□□□□□ -1.05
PBX1-211ENST00000498497 RPL36ALQ969Q0 106 aaKnown RBP8.5□□□□□ -1.05
PBX1-211ENST00000498497 TRAV10A0A0B4J240 114 aa8.49□□□□□ -1.05
PBX1-211ENST00000498497 C19orf84I3L1E1 186 aa8.49□□□□□ -1.05
PBX1-211ENST00000498497 LINC00315P59091 139 aa8.49□□□□□ -1.05
PBX1-211ENST00000498497 DGAT2L7PQ6IED9 249 aa8.49□□□□□ -1.05
PBX1-211ENST00000498497 SPANXDQ9BXN6 97 aa8.49□□□□□ -1.05
PBX1-211ENST00000498497 ZFAND3Q9H8U3 227 aa8.49□□□□□ -1.05
PBX1-211ENST00000498497 IGHV4-4A0A075B6R2 117 aa8.49□□□□□ -1.05
PBX1-211ENST00000498497 IGHV3-11P01762 117 aa8.48□□□□□ -1.05
PBX1-211ENST00000498497 FDCSPQ8NFU4 85 aa8.48□□□□□ -1.05
PBX1-211ENST00000498497 IGHV3-16A0A0C4DH30 117 aa8.48□□□□□ -1.05
PBX1-211ENST00000498497 PSPHP1O15172 72 aa8.48□□□□□ -1.05
PBX1-211ENST00000498497 IGLV1-44P01699 117 aa8.48□□□□□ -1.05
PBX1-211ENST00000498497 BEAN1Q3B7T3 259 aa8.48□□□□□ -1.05
PBX1-211ENST00000498497 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.48□□□□□ -1.05
PBX1-211ENST00000498497 LINC01600Q96MT4 127 aa8.48□□□□□ -1.05
PBX1-211ENST00000498497 LINC00574Q9H8X3 128 aa8.48□□□□□ -1.05
PBX1-211ENST00000498497 CRPP02741 224 aa8.47□□□□□ -1.05
PBX1-211ENST00000498497 UNQ9165/PRO28630Q6UXU0 137 aa8.47□□□□□ -1.05
PBX1-211ENST00000498497 COX6A2Q02221 97 aa8.46□□□□□ -1.05
PBX1-211ENST00000498497 C10orf142B7Z368 130 aa8.45□□□□□ -1.06
PBX1-211ENST00000498497 MYO9AB2RTY4 2548 aa8.45□□□□□ -1.06
PBX1-211ENST00000498497 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.45□□□□□ -1.06
PBX1-211ENST00000498497 PAX4O43316 350 aa8.45□□□□□ -1.06
PBX1-211ENST00000498497 IGFL2Q6UWQ7 119 aa8.45□□□□□ -1.06
PBX1-211ENST00000498497 KIF25-AS1Q9Y6Z4 181 aa8.45□□□□□ -1.06
PBX1-211ENST00000498497 SPTBN4Q9H254 2564 aa8.45□□□□□ -1.06
PBX1-211ENST00000498497 FN1P02751 2386 aaKnown RBP8.45□□□□□ -1.06
PBX1-211ENST00000498497 C11orf72Q8NBR9 251 aa8.45□□□□□ -1.06
PBX1-211ENST00000498497 ANKRD11Q6UB99 2663 aaPredicted RBP8.44□□□□□ -1.06
PBX1-211ENST00000498497 A0A0J9YX75 114 aa8.44□□□□□ -1.06
PBX1-211ENST00000498497 M0QY20 66 aa8.44□□□□□ -1.06
PBX1-211ENST00000498497 IGLV1-47P01700 117 aa8.44□□□□□ -1.06
PBX1-211ENST00000498497 IGHV1-69P01742 117 aa8.44□□□□□ -1.06
PBX1-211ENST00000498497 PRR4Q16378 134 aa8.44□□□□□ -1.06
PBX1-211ENST00000498497 LINC00337Q8N6G1 96 aa8.44□□□□□ -1.06
PBX1-211ENST00000498497 SMIM11BQ8TCY0 68 aa8.44□□□□□ -1.06
PBX1-211ENST00000498497 A8MU10 97 aa8.43□□□□□ -1.06
PBX1-211ENST00000498497 NANOS2P60321 138 aaKnown RBP8.43□□□□□ -1.06
PBX1-211ENST00000498497 TM2D3Q9BRN9 247 aa8.43□□□□□ -1.06
PBX1-211ENST00000498497 SAA4P35542 130 aa8.43□□□□□ -1.06
PBX1-211ENST00000498497 LINC00158P58513 81 aa8.42□□□□□ -1.06
PBX1-211ENST00000498497 ITLN2Q8WWU7 325 aaPredicted RBP8.42□□□□□ -1.06
PBX1-211ENST00000498497 TMEM30BQ3MIR4 351 aa8.42□□□□□ -1.06
PBX1-211ENST00000498497 HIST2H2BCQ6DN03 193 aa8.42□□□□□ -1.06
PBX1-211ENST00000498497 HIST2H2BDQ6DRA6 164 aa8.42□□□□□ -1.06
PBX1-211ENST00000498497 SPINK13Q1W4C9 94 aa8.41□□□□□ -1.06
PBX1-211ENST00000498497 LINC00467Q9BRT7 94 aa8.41□□□□□ -1.06
PBX1-211ENST00000498497 TMEM89A2RUT3 159 aa8.41□□□□□ -1.06
PBX1-211ENST00000498497 BLCAPP62952 87 aa8.41□□□□□ -1.06
PBX1-211ENST00000498497 MRPS36P82909 103 aaKnown RBP8.41□□□□□ -1.06
PBX1-211ENST00000498497 CCDC140Q96MF4 163 aa8.41□□□□□ -1.06
PBX1-211ENST00000498497 IGHV4OR15-8A0A075B7B6 117 aa8.4□□□□□ -1.06
PBX1-211ENST00000498497 A0A087WW49 117 aa8.4□□□□□ -1.06
PBX1-211ENST00000498497 ATP6V0E1O15342 81 aa8.4□□□□□ -1.06
PBX1-211ENST00000498497 GRNP28799 593 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms