RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 SEC11BP0C7V7 166 aa3.92□□□□□ -1.78
TMEM39A-212ENST00000497993 FGF6P10767 208 aa3.92□□□□□ -1.78
TMEM39A-212ENST00000497993 GCHFRP30047 84 aa3.92□□□□□ -1.78
TMEM39A-212ENST00000497993 BTN1A1Q13410 526 aa3.92□□□□□ -1.78
TMEM39A-212ENST00000497993 TMEM75Q8N9X5 138 aa3.92□□□□□ -1.78
TMEM39A-212ENST00000497993 NKX6-2Q9C056 277 aaPredicted RBP3.92□□□□□ -1.78
TMEM39A-212ENST00000497993 RPP21Q9H633 154 aaKnown RBP3.92□□□□□ -1.78
TMEM39A-212ENST00000497993 NOP10Q9NPE3 64 aaKnown RBP3.92□□□□□ -1.78
TMEM39A-212ENST00000497993 FXYD6-FXYD2A0A087WZ82 144 aa3.91□□□□□ -1.78
TMEM39A-212ENST00000497993 TRAV12-3A0A0B4J271 114 aa3.91□□□□□ -1.78
TMEM39A-212ENST00000497993 A0A1B0GVY2 172 aa3.91□□□□□ -1.78
TMEM39A-212ENST00000497993 IFNA7P01567 189 aa3.91□□□□□ -1.78
TMEM39A-212ENST00000497993 C1QBP02746 253 aa3.91□□□□□ -1.78
TMEM39A-212ENST00000497993 TCRAP04437 139 aa3.91□□□□□ -1.78
TMEM39A-212ENST00000497993 GPX1P07203 203 aa3.91□□□□□ -1.78
TMEM39A-212ENST00000497993 EMP1P54849 157 aa3.91□□□□□ -1.78
TMEM39A-212ENST00000497993 HERVK_113P63121 156 aa3.91□□□□□ -1.78
TMEM39A-212ENST00000497993 FABP9Q0Z7S8 132 aa3.91□□□□□ -1.78
TMEM39A-212ENST00000497993 DNLZQ5SXM8 178 aa3.91□□□□□ -1.78
TMEM39A-212ENST00000497993 AKR1C8PQ5T2L2 129 aa3.91□□□□□ -1.78
TMEM39A-212ENST00000497993 DPPA3Q6W0C5 159 aa3.91□□□□□ -1.78
TMEM39A-212ENST00000497993 Q6ZQT7 251 aa3.91□□□□□ -1.78
TMEM39A-212ENST00000497993 ZNF767PQ75MW2 155 aa3.91□□□□□ -1.78
TMEM39A-212ENST00000497993 ORMDL3Q8N138 153 aa3.91□□□□□ -1.78
TMEM39A-212ENST00000497993 CYB561D1Q8N8Q1 229 aa3.91□□□□□ -1.78
TMEM39A-212ENST00000497993 Q8TAT8 98 aa3.91□□□□□ -1.78
TMEM39A-212ENST00000497993 MBD3L1Q8WWY6 194 aa3.91□□□□□ -1.78
TMEM39A-212ENST00000497993 PKD1P98161 4303 aa3.9□□□□□ -1.78
TMEM39A-212ENST00000497993 TRAV1-1A0A0B4J248 108 aa3.9□□□□□ -1.79
TMEM39A-212ENST00000497993 TRAV21A0A0B4J279 112 aa3.9□□□□□ -1.79
TMEM39A-212ENST00000497993 FAM236DA0A1B0GTK5 79 aa3.9□□□□□ -1.79
TMEM39A-212ENST00000497993 UMAD1C9J7I0 102 aa3.9□□□□□ -1.79
TMEM39A-212ENST00000497993 ARPC5O15511 151 aa3.9□□□□□ -1.79
TMEM39A-212ENST00000497993 PPBPP02775 128 aa3.9□□□□□ -1.79
TMEM39A-212ENST00000497993 FAM236CP0DP71 79 aa3.9□□□□□ -1.79
TMEM39A-212ENST00000497993 MT3P25713 68 aa3.9□□□□□ -1.79
TMEM39A-212ENST00000497993 LGALSLQ3ZCW2 172 aaPredicted RBP3.9□□□□□ -1.79
TMEM39A-212ENST00000497993 Q6ZTI0 123 aa3.9□□□□□ -1.79
TMEM39A-212ENST00000497993 GOLT1AQ6ZVE7 132 aa3.9□□□□□ -1.79
TMEM39A-212ENST00000497993 CEND1Q8N111 149 aa3.9□□□□□ -1.79
TMEM39A-212ENST00000497993 CMTM2Q8TAZ6 248 aa3.9□□□□□ -1.79
TMEM39A-212ENST00000497993 HIST1H2BAQ96A08 127 aa3.9□□□□□ -1.79
TMEM39A-212ENST00000497993 TRAV26-2A0A0B4J265 109 aa3.89□□□□□ -1.79
TMEM39A-212ENST00000497993 KANTRA0A1W2PQU2 76 aa3.89□□□□□ -1.79
TMEM39A-212ENST00000497993 K7EP13 123 aa3.89□□□□□ -1.79
TMEM39A-212ENST00000497993 BPY2O14599 106 aa3.89□□□□□ -1.79
TMEM39A-212ENST00000497993 RTL8CO15255 209 aa3.89□□□□□ -1.79
TMEM39A-212ENST00000497993 BCL2L11O43521 198 aa3.89□□□□□ -1.79
TMEM39A-212ENST00000497993 CXCL1P09341 107 aa3.89□□□□□ -1.79
TMEM39A-212ENST00000497993 DEFB130BP0DP73 79 aa3.89□□□□□ -1.79
TMEM39A-212ENST00000497993 DEFB130AP0DP74 79 aa3.89□□□□□ -1.79
TMEM39A-212ENST00000497993 PRB4P10163 310 aaPredicted RBP3.89□□□□□ -1.79
TMEM39A-212ENST00000497993 RNASE4P34096 147 aaKnown RBP3.89□□□□□ -1.79
TMEM39A-212ENST00000497993 TMEM241Q24JQ0 296 aa3.89□□□□□ -1.79
TMEM39A-212ENST00000497993 PCP2Q8IVA1 136 aa3.89□□□□□ -1.79
TMEM39A-212ENST00000497993 ANKRD29Q8N6D5 301 aa3.89□□□□□ -1.79
TMEM39A-212ENST00000497993 TMEM70Q9BUB7 260 aa3.89□□□□□ -1.79
TMEM39A-212ENST00000497993 C8orf17Q9NRJ1 99 aa3.89□□□□□ -1.79
TMEM39A-212ENST00000497993 EPDR1Q9UM22 224 aa3.89□□□□□ -1.79
TMEM39A-212ENST00000497993 MRPS16Q9Y3D3 137 aaKnown RBP3.89□□□□□ -1.79
TMEM39A-212ENST00000497993 LRP1BQ9NZR2 4599 aa3.89□□□□□ -1.79
TMEM39A-212ENST00000497993 A0A096LPF7 62 aa3.88□□□□□ -1.79
TMEM39A-212ENST00000497993 TRAV4A0A0B4J268 109 aa3.88□□□□□ -1.79
TMEM39A-212ENST00000497993 MAP1LC3B2A6NCE7 125 aa3.88□□□□□ -1.79
TMEM39A-212ENST00000497993 A8MWL6 223 aa3.88□□□□□ -1.79
TMEM39A-212ENST00000497993 M0R2P5 195 aa3.88□□□□□ -1.79
TMEM39A-212ENST00000497993 APCSP02743 223 aa3.88□□□□□ -1.79
TMEM39A-212ENST00000497993 GNG5P63218 68 aa3.88□□□□□ -1.79
TMEM39A-212ENST00000497993 Q86TA4 180 aa3.88□□□□□ -1.79
TMEM39A-212ENST00000497993 FRZBQ92765 325 aa3.88□□□□□ -1.79
TMEM39A-212ENST00000497993 TXNDC17Q9BRA2 123 aa3.88□□□□□ -1.79
TMEM39A-212ENST00000497993 NDFIP1Q9BT67 221 aa3.88□□□□□ -1.79
TMEM39A-212ENST00000497993 CHCHD7Q9BUK0 85 aa3.88□□□□□ -1.79
TMEM39A-212ENST00000497993 MAP1LC3BQ9GZQ8 125 aa3.88□□□□□ -1.79
TMEM39A-212ENST00000497993 RNASE7Q9H1E1 156 aaKnown RBP3.88□□□□□ -1.79
TMEM39A-212ENST00000497993 SND1-IT1Q9HBX3 110 aa3.88□□□□□ -1.79
TMEM39A-212ENST00000497993 SS18L2Q9UHA2 77 aa3.88□□□□□ -1.79
TMEM39A-212ENST00000497993 PRO0255Q9UI72 69 aa3.88□□□□□ -1.79
TMEM39A-212ENST00000497993 ZFP30Q9Y2G7 519 aa3.88□□□□□ -1.79
TMEM39A-212ENST00000497993 LINC00588Q9Y4M8 146 aa3.88□□□□□ -1.79
TMEM39A-212ENST00000497993 DNAH5Q8TE73 4624 aa3.87□□□□□ -1.79
TMEM39A-212ENST00000497993 TRGV1A0A0A0MS02 117 aa3.87□□□□□ -1.79
TMEM39A-212ENST00000497993 NBDYA0A0U1RRE5 68 aa3.87□□□□□ -1.79
TMEM39A-212ENST00000497993 APOMO95445 188 aa3.87□□□□□ -1.79
TMEM39A-212ENST00000497993 LTAP01374 205 aa3.87□□□□□ -1.79
TMEM39A-212ENST00000497993 LINC00694P0DN24 101 aa3.87□□□□□ -1.79
TMEM39A-212ENST00000497993 RNASE3P12724 160 aaKnown RBP3.87□□□□□ -1.79
TMEM39A-212ENST00000497993 RAB5CP51148 216 aa3.87□□□□□ -1.79
TMEM39A-212ENST00000497993 ZNF80P51504 273 aaPredicted RBP3.87□□□□□ -1.79
TMEM39A-212ENST00000497993 CCL18P55774 89 aa3.87□□□□□ -1.79
TMEM39A-212ENST00000497993 RBX1P62877 108 aa3.87□□□□□ -1.79
TMEM39A-212ENST00000497993 RNASE13Q5GAN3 156 aaKnown RBP3.87□□□□□ -1.79
TMEM39A-212ENST00000497993 IL36BQ9NZH7 164 aa3.87□□□□□ -1.79
TMEM39A-212ENST00000497993 MDFICQ9P1T7 246 aa3.87□□□□□ -1.79
TMEM39A-212ENST00000497993 TRGV2A0A075B6R0 118 aa3.86□□□□□ -1.79
TMEM39A-212ENST00000497993 IGKV3D-20A0A0C4DH25 116 aa3.86□□□□□ -1.79
TMEM39A-212ENST00000497993 A0A1B0GVX0 72 aa3.86□□□□□ -1.79
TMEM39A-212ENST00000497993 TRBV6-4A0A1B0GX49 114 aa3.86□□□□□ -1.79
TMEM39A-212ENST00000497993 F6UZH7 168 aa3.86□□□□□ -1.79
TMEM39A-212ENST00000497993 NDUFC2O95298 119 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms