RNA–Protein interactions for RNA: ENST00000497977.1

PTPRN-218, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-218ENST00000497977 CCL25O15444 150 aa6.91□□□□□ -1.3
PTPRN-218ENST00000497977 KRTAP10-2P60368 255 aa6.91□□□□□ -1.3
PTPRN-218ENST00000497977 LAMTOR2Q9Y2Q5 125 aa6.91□□□□□ -1.3
PTPRN-218ENST00000497977 COLCA2A8K830 154 aa6.9□□□□□ -1.3
PTPRN-218ENST00000497977 TRGC2P03986 189 aa6.9□□□□□ -1.3
PTPRN-218ENST00000497977 G0S2P27469 103 aa6.9□□□□□ -1.3
PTPRN-218ENST00000497977 POLR2KP53803 58 aaKnown RBP6.9□□□□□ -1.3
PTPRN-218ENST00000497977 CLPSL2Q6UWE3 100 aa6.9□□□□□ -1.3
PTPRN-218ENST00000497977 OR5A1Q8NGJ0 315 aa6.9□□□□□ -1.3
PTPRN-218ENST00000497977 ALKBH7Q9BT30 221 aaPredicted RBP6.9□□□□□ -1.3
PTPRN-218ENST00000497977 AP5S1Q9NUS5 200 aa6.9□□□□□ -1.3
PTPRN-218ENST00000497977 FGF6P10767 208 aa6.89□□□□□ -1.31
PTPRN-218ENST00000497977 RPL32P62910 135 aaKnown RBP6.89□□□□□ -1.31
PTPRN-218ENST00000497977 SS18Q15532 418 aa6.89□□□□□ -1.31
PTPRN-218ENST00000497977 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.88□□□□□ -1.31
PTPRN-218ENST00000497977 IFI27P40305 119 aaPredicted RBP6.88□□□□□ -1.31
PTPRN-218ENST00000497977 FA2HQ7L5A8 372 aa6.88□□□□□ -1.31
PTPRN-218ENST00000497977 Q8N8P6 123 aa6.88□□□□□ -1.31
PTPRN-218ENST00000497977 C20orf203Q8NBC4 194 aa6.88□□□□□ -1.31
PTPRN-218ENST00000497977 PRSS3P2Q8NHM4 247 aa6.88□□□□□ -1.31
PTPRN-218ENST00000497977 CSDC2Q9Y534 153 aaKnown RBP6.88□□□□□ -1.31
PTPRN-218ENST00000497977 ESDP10768 282 aa6.87□□□□□ -1.31
PTPRN-218ENST00000497977 RPL39P62891 51 aaKnown RBP6.87□□□□□ -1.31
PTPRN-218ENST00000497977 MRPL52Q86TS9 123 aaKnown RBP6.87□□□□□ -1.31
PTPRN-218ENST00000497977 C18orf32Q8TCD1 76 aa6.87□□□□□ -1.31
PTPRN-218ENST00000497977 NXT2Q9NPJ8 142 aaKnown RBP6.87□□□□□ -1.31
PTPRN-218ENST00000497977 DNAH17Q9UFH2 4485 aa6.86□□□□□ -1.31
PTPRN-218ENST00000497977 IGLV4-60A0A075B6I1 120 aa6.86□□□□□ -1.31
PTPRN-218ENST00000497977 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.86□□□□□ -1.31
PTPRN-218ENST00000497977 IGKV3OR2-268A0A0C4DH90 116 aa6.86□□□□□ -1.31
PTPRN-218ENST00000497977 C1orf196B1AJZ1 125 aa6.86□□□□□ -1.31
PTPRN-218ENST00000497977 FAM229AH3BQW9 127 aa6.86□□□□□ -1.31
PTPRN-218ENST00000497977 LECT2O14960 151 aa6.86□□□□□ -1.31
PTPRN-218ENST00000497977 ZNF664Q8N3J9 261 aa6.86□□□□□ -1.31
PTPRN-218ENST00000497977 MAPKAPK5-AS1Q8N8E1 139 aa6.86□□□□□ -1.31
PTPRN-218ENST00000497977 KRTAP17-1Q9BYP8 105 aa6.86□□□□□ -1.31
PTPRN-218ENST00000497977 PKIGQ9Y2B9 76 aa6.86□□□□□ -1.31
PTPRN-218ENST00000497977 FAT2Q9NYQ8 4349 aa6.86□□□□□ -1.31
PTPRN-218ENST00000497977 PCLOQ9Y6V0 5065 aa6.85□□□□□ -1.31
PTPRN-218ENST00000497977 IGLV10-54A0A075B6I4 117 aa6.85□□□□□ -1.31
PTPRN-218ENST00000497977 USP17L23D6RBM5 183 aa6.85□□□□□ -1.31
PTPRN-218ENST00000497977 K7EMI3 77 aa6.85□□□□□ -1.31
PTPRN-218ENST00000497977 RNASE13Q5GAN3 156 aaKnown RBP6.85□□□□□ -1.31
PTPRN-218ENST00000497977 TIMM21Q9BVV7 248 aa6.85□□□□□ -1.31
PTPRN-218ENST00000497977 PMCHL1Q16048 86 aa6.84□□□□□ -1.31
PTPRN-218ENST00000497977 ORMDL2Q53FV1 153 aa6.84□□□□□ -1.31
PTPRN-218ENST00000497977 Q6ZUT4 128 aa6.84□□□□□ -1.31
PTPRN-218ENST00000497977 BAGE3Q86Y29 109 aa6.84□□□□□ -1.31
PTPRN-218ENST00000497977 CDC42SE2Q9NRR3 84 aa6.84□□□□□ -1.31
PTPRN-218ENST00000497977 PKHD1P08F94 4074 aa6.83□□□□□ -1.32
PTPRN-218ENST00000497977 hDV102S1A0JD36 115 aa6.83□□□□□ -1.32
PTPRN-218ENST00000497977 GAGE12HA6NDE8 117 aa6.83□□□□□ -1.32
PTPRN-218ENST00000497977 LINC01549A6NIU2 74 aa6.83□□□□□ -1.32
PTPRN-218ENST00000497977 PRSS47A8MTI9 375 aa6.83□□□□□ -1.32
PTPRN-218ENST00000497977 C2orf66Q6UXQ4 117 aa6.83□□□□□ -1.32
PTPRN-218ENST00000497977 CHCHD10Q8WYQ3 142 aaPredicted RBP6.83□□□□□ -1.32
PTPRN-218ENST00000497977 DPH3Q96FX2 82 aa6.83□□□□□ -1.32
PTPRN-218ENST00000497977 CYSLTR1Q9Y271 337 aa6.83□□□□□ -1.32
PTPRN-218ENST00000497977 UBE2D4Q9Y2X8 147 aa6.83□□□□□ -1.32
PTPRN-218ENST00000497977 PKD1P98161 4303 aa6.82□□□□□ -1.32
PTPRN-218ENST00000497977 LINC00959A0A1B0GUT2 108 aa6.82□□□□□ -1.32
PTPRN-218ENST00000497977 MALP21145 153 aa6.82□□□□□ -1.32
PTPRN-218ENST00000497977 KRTAP10-1P60331 282 aa6.82□□□□□ -1.32
PTPRN-218ENST00000497977 PAPPA-AS1Q5QFB9 102 aa6.82□□□□□ -1.32
PTPRN-218ENST00000497977 CD164L2Q6UWJ8 174 aa6.82□□□□□ -1.32
PTPRN-218ENST00000497977 Q8N1X5 172 aa6.82□□□□□ -1.32
PTPRN-218ENST00000497977 URB1-AS1Q96HZ7 61 aa6.82□□□□□ -1.32
PTPRN-218ENST00000497977 SPANXA1Q9NS26 97 aa6.82□□□□□ -1.32
PTPRN-218ENST00000497977 KIAA1109Q2LD37 5005 aa6.82□□□□□ -1.32
PTPRN-218ENST00000497977 RYR1P21817 5038 aa6.81□□□□□ -1.32
PTPRN-218ENST00000497977 EPM2AB3EWF7 344 aa6.81□□□□□ -1.32
PTPRN-218ENST00000497977 SERF1AO75920 110 aa6.81□□□□□ -1.32
PTPRN-218ENST00000497977 APOMO95445 188 aa6.81□□□□□ -1.32
PTPRN-218ENST00000497977 C9orf163Q8N9P6 203 aa6.81□□□□□ -1.32
PTPRN-218ENST00000497977 OPRPNQ99935 248 aaPredicted RBP6.81□□□□□ -1.32
PTPRN-218ENST00000497977 IGHV3-64A0A075B6Q5 118 aa6.8□□□□□ -1.32
PTPRN-218ENST00000497977 IGHV1-58A0A0C4DH39 117 aa6.8□□□□□ -1.32
PTPRN-218ENST00000497977 ZNF561-AS1K7EIQ3 104 aa6.8□□□□□ -1.32
PTPRN-218ENST00000497977 HIST1H2BKO60814 126 aa6.8□□□□□ -1.32
PTPRN-218ENST00000497977 HSBP1O75506 76 aa6.8□□□□□ -1.32
PTPRN-218ENST00000497977 HIST1H2BJP06899 126 aa6.8□□□□□ -1.32
PTPRN-218ENST00000497977 PRSS1P07477 247 aa6.8□□□□□ -1.32
PTPRN-218ENST00000497977 NPSP0C0P6 89 aa6.8□□□□□ -1.32
PTPRN-218ENST00000497977 LINC00614P0C842 121 aa6.8□□□□□ -1.32
PTPRN-218ENST00000497977 HIST1H2BOP23527 126 aa6.8□□□□□ -1.32
PTPRN-218ENST00000497977 HIST1H2BBP33778 126 aa6.8□□□□□ -1.32
PTPRN-218ENST00000497977 XCL1P47992 114 aa6.8□□□□□ -1.32
PTPRN-218ENST00000497977 HIST1H2BDP58876 126 aa6.8□□□□□ -1.32
PTPRN-218ENST00000497977 RAB5BP61020 215 aa6.8□□□□□ -1.32
PTPRN-218ENST00000497977 CNBPP62633 177 aaKnown RBP6.8□□□□□ -1.32
PTPRN-218ENST00000497977 HIST1H2BCP62807 126 aa6.8□□□□□ -1.32
PTPRN-218ENST00000497977 HIST2H2BEQ16778 126 aa6.8□□□□□ -1.32
PTPRN-218ENST00000497977 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.8□□□□□ -1.32
PTPRN-218ENST00000497977 Q6ZN92 141 aa6.8□□□□□ -1.32
PTPRN-218ENST00000497977 HIST1H2BHQ93079 126 aa6.8□□□□□ -1.32
PTPRN-218ENST00000497977 HIST1H2BNQ99877 126 aa6.8□□□□□ -1.32
PTPRN-218ENST00000497977 HIST1H2BMQ99879 126 aa6.8□□□□□ -1.32
PTPRN-218ENST00000497977 COX7A2LO14548 114 aa6.79□□□□□ -1.32
PTPRN-218ENST00000497977 HBDP02042 147 aa6.79□□□□□ -1.32
PTPRN-218ENST00000497977 FUSP35637 526 aaKnown RBP eCLIP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms