RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 C10orf91Q5T1B1 145 aa7.74□□□□□ -1.17
MRPL55-234ENST00000497758 DGAT2L7PQ6IED9 249 aa7.74□□□□□ -1.17
MRPL55-234ENST00000497758 TMEM18Q96B42 140 aa7.74□□□□□ -1.17
MRPL55-234ENST00000497758 USP17L23D6RBM5 183 aa7.73□□□□□ -1.17
MRPL55-234ENST00000497758 MRPL52Q86TS9 123 aaKnown RBP7.73□□□□□ -1.17
MRPL55-234ENST00000497758 CLRN3Q8NCR9 226 aa7.73□□□□□ -1.17
MRPL55-234ENST00000497758 RPS10P5Q9NQ39 176 aa7.73□□□□□ -1.17
MRPL55-234ENST00000497758 LAMTOR2Q9Y2Q5 125 aa7.73□□□□□ -1.17
MRPL55-234ENST00000497758 RAB5AP20339 215 aa7.72□□□□□ -1.17
MRPL55-234ENST00000497758 KRTAP10-1P60331 282 aa7.72□□□□□ -1.17
MRPL55-234ENST00000497758 MAP1LC3AQ9H492 121 aa7.72□□□□□ -1.17
MRPL55-234ENST00000497758 APOBP04114 4563 aaKnown RBP7.72□□□□□ -1.17
MRPL55-234ENST00000497758 APOC3P02656 99 aa7.71□□□□□ -1.18
MRPL55-234ENST00000497758 KRTAP26-1Q6PEX3 210 aa7.71□□□□□ -1.18
MRPL55-234ENST00000497758 ZNF664Q8N3J9 261 aa7.71□□□□□ -1.18
MRPL55-234ENST00000497758 HSPG2P98160 4391 aa7.7□□□□□ -1.18
MRPL55-234ENST00000497758 LOC389332A0A1B0GUA5 103 aa7.7□□□□□ -1.18
MRPL55-234ENST00000497758 GAGE12HA6NDE8 117 aa7.7□□□□□ -1.18
MRPL55-234ENST00000497758 SVBPQ8N300 66 aa7.7□□□□□ -1.18
MRPL55-234ENST00000497758 CHCHD10Q8WYQ3 142 aaPredicted RBP7.7□□□□□ -1.18
MRPL55-234ENST00000497758 CDC42SE2Q9NRR3 84 aa7.7□□□□□ -1.18
MRPL55-234ENST00000497758 SNAPINO95295 136 aa7.69□□□□□ -1.18
MRPL55-234ENST00000497758 XCL1P47992 114 aa7.69□□□□□ -1.18
MRPL55-234ENST00000497758 SS18Q15532 418 aa7.69□□□□□ -1.18
MRPL55-234ENST00000497758 TIMM21Q9BVV7 248 aa7.69□□□□□ -1.18
MRPL55-234ENST00000497758 UBE2D4Q9Y2X8 147 aa7.69□□□□□ -1.18
MRPL55-234ENST00000497758 CSDC2Q9Y534 153 aaKnown RBP7.69□□□□□ -1.18
MRPL55-234ENST00000497758 LINC00959A0A1B0GUT2 108 aa7.68□□□□□ -1.18
MRPL55-234ENST00000497758 hDV102S1A0JD36 115 aa7.68□□□□□ -1.18
MRPL55-234ENST00000497758 PRSS1P07477 247 aa7.68□□□□□ -1.18
MRPL55-234ENST00000497758 RPL39P62891 51 aaKnown RBP7.68□□□□□ -1.18
MRPL55-234ENST00000497758 COX19Q49B96 90 aa7.68□□□□□ -1.18
MRPL55-234ENST00000497758 CFAP161Q6P656 301 aa7.68□□□□□ -1.18
MRPL55-234ENST00000497758 GNB1LQ9BYB4 327 aa7.68□□□□□ -1.18
MRPL55-234ENST00000497758 AP5S1Q9NUS5 200 aa7.68□□□□□ -1.18
MRPL55-234ENST00000497758 PRSS47A8MTI9 375 aa7.67□□□□□ -1.18
MRPL55-234ENST00000497758 CCL25O15444 150 aa7.67□□□□□ -1.18
MRPL55-234ENST00000497758 KIAA1644Q3SXP7 199 aa7.67□□□□□ -1.18
MRPL55-234ENST00000497758 RNASE13Q5GAN3 156 aaKnown RBP7.67□□□□□ -1.18
MRPL55-234ENST00000497758 Q6ZUT4 128 aa7.67□□□□□ -1.18
MRPL55-234ENST00000497758 Q8N8P6 123 aa7.67□□□□□ -1.18
MRPL55-234ENST00000497758 SPANXA1Q9NS26 97 aa7.67□□□□□ -1.18
MRPL55-234ENST00000497758 TRAV13-1A0A0B4J241 112 aa7.66□□□□□ -1.18
MRPL55-234ENST00000497758 MT-ND6P03923 174 aa7.66□□□□□ -1.18
MRPL55-234ENST00000497758 LINC01620Q4KN68 170 aa7.66□□□□□ -1.18
MRPL55-234ENST00000497758 NXT2Q9NPJ8 142 aaKnown RBP7.66□□□□□ -1.18
MRPL55-234ENST00000497758 C1orf196B1AJZ1 125 aa7.65□□□□□ -1.18
MRPL55-234ENST00000497758 IFI27P40305 119 aaPredicted RBP7.65□□□□□ -1.18
MRPL55-234ENST00000497758 FOXI1Q12951 378 aa7.65□□□□□ -1.18
MRPL55-234ENST00000497758 ORMDL2Q53FV1 153 aa7.65□□□□□ -1.18
MRPL55-234ENST00000497758 CD164L2Q6UWJ8 174 aa7.65□□□□□ -1.18
MRPL55-234ENST00000497758 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.64□□□□□ -1.19
MRPL55-234ENST00000497758 K7EMI3 77 aa7.64□□□□□ -1.19
MRPL55-234ENST00000497758 XGP55808 180 aa7.64□□□□□ -1.19
MRPL55-234ENST00000497758 MRPS36P82909 103 aaKnown RBP7.64□□□□□ -1.19
MRPL55-234ENST00000497758 FABP9Q0Z7S8 132 aa7.64□□□□□ -1.19
MRPL55-234ENST00000497758 MRPL18Q9H0U6 180 aaKnown RBP7.64□□□□□ -1.19
MRPL55-234ENST00000497758 CYSLTR1Q9Y271 337 aa7.64□□□□□ -1.19
MRPL55-234ENST00000497758 PCLOQ9Y6V0 5065 aa7.63□□□□□ -1.19
MRPL55-234ENST00000497758 TGIF2-C20orf24A0A0A6YYL0 155 aa7.63□□□□□ -1.19
MRPL55-234ENST00000497758 IFITM10A6NMD0 228 aa7.63□□□□□ -1.19
MRPL55-234ENST00000497758 MALP21145 153 aa7.63□□□□□ -1.19
MRPL55-234ENST00000497758 G0S2P27469 103 aa7.63□□□□□ -1.19
MRPL55-234ENST00000497758 CNBPP62633 177 aaKnown RBP7.63□□□□□ -1.19
MRPL55-234ENST00000497758 HAMPP81172 84 aa7.63□□□□□ -1.19
MRPL55-234ENST00000497758 HIGD2BQ4VC39 106 aa7.63□□□□□ -1.19
MRPL55-234ENST00000497758 C15orf56Q8N910 161 aa7.63□□□□□ -1.19
MRPL55-234ENST00000497758 PRSS3P2Q8NHM4 247 aa7.63□□□□□ -1.19
MRPL55-234ENST00000497758 IGHV1-58A0A0C4DH39 117 aa7.62□□□□□ -1.19
MRPL55-234ENST00000497758 COX7A2LO14548 114 aa7.62□□□□□ -1.19
MRPL55-234ENST00000497758 C2orf66Q6UXQ4 117 aa7.62□□□□□ -1.19
MRPL55-234ENST00000497758 Q8N1X5 172 aa7.62□□□□□ -1.19
MRPL55-234ENST00000497758 OPRPNQ99935 248 aaPredicted RBP7.62□□□□□ -1.19
MRPL55-234ENST00000497758 ALKBH7Q9BT30 221 aaPredicted RBP7.62□□□□□ -1.19
MRPL55-234ENST00000497758 FAM30AQ9NZY2 134 aa7.62□□□□□ -1.19
MRPL55-234ENST00000497758 PYGO1Q9Y3Y4 419 aa7.62□□□□□ -1.19
MRPL55-234ENST00000497758 GVQW2A0A096LPI5 108 aaPredicted RBP7.61□□□□□ -1.19
MRPL55-234ENST00000497758 Q6ZN92 141 aa7.61□□□□□ -1.19
MRPL55-234ENST00000497758 Q6ZSA8 131 aa7.61□□□□□ -1.19
MRPL55-234ENST00000497758 SLC7A5P1Q8MH63 180 aa7.61□□□□□ -1.19
MRPL55-234ENST00000497758 C9orf163Q8N9P6 203 aa7.61□□□□□ -1.19
MRPL55-234ENST00000497758 TMEM141Q96I45 108 aa7.61□□□□□ -1.19
MRPL55-234ENST00000497758 TRAPPC1Q9Y5R8 145 aa7.61□□□□□ -1.19
MRPL55-234ENST00000497758 IGLV4-3A0A075B6K6 122 aa7.6□□□□□ -1.19
MRPL55-234ENST00000497758 IGHV3-64A0A075B6Q5 118 aa7.6□□□□□ -1.19
MRPL55-234ENST00000497758 TEX43Q6ZNM6 134 aa7.6□□□□□ -1.19
MRPL55-234ENST00000497758 FA2HQ7L5A8 372 aa7.6□□□□□ -1.19
MRPL55-234ENST00000497758 C2orf88Q9BSF0 95 aa7.6□□□□□ -1.19
MRPL55-234ENST00000497758 SMCO4Q9NRQ5 59 aa7.6□□□□□ -1.19
MRPL55-234ENST00000497758 DNAH8Q96JB1 4490 aa7.6□□□□□ -1.19
MRPL55-234ENST00000497758 ZNF561-AS1K7EIQ3 104 aa7.59□□□□□ -1.19
MRPL55-234ENST00000497758 APOMO95445 188 aa7.59□□□□□ -1.19
MRPL55-234ENST00000497758 FAM104AQ969W3 186 aa7.59□□□□□ -1.19
MRPL55-234ENST00000497758 VCX2Q9H322 139 aa7.59□□□□□ -1.19
MRPL55-234ENST00000497758 ABCA13Q86UQ4 5058 aa7.59□□□□□ -1.19
MRPL55-234ENST00000497758 EPM2AB3EWF7 344 aa7.58□□□□□ -1.2
MRPL55-234ENST00000497758 SMR3BP02814 79 aaPredicted RBP7.58□□□□□ -1.2
MRPL55-234ENST00000497758 SLPIP03973 132 aa7.58□□□□□ -1.2
MRPL55-234ENST00000497758 NPSP0C0P6 89 aa7.58□□□□□ -1.2
MRPL55-234ENST00000497758 PAPPA-AS1Q5QFB9 102 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms