RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 E7EUB6 86 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 FNDC10F2Z333 226 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 KLF7O75840 302 aaPredicted RBP1.05□□□□□ -2.24
UBR4-217ENST00000497018 MPC2O95563 127 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 TRACP01848 142 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 CD2P06729 351 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 BAALC-AS2P0C853 105 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 HIST1H1BP16401 226 aaKnown RBP1.05□□□□□ -2.24
UBR4-217ENST00000497018 HIST1H1DP16402 221 aaKnown RBP1.05□□□□□ -2.24
UBR4-217ENST00000497018 DSCR4P56555 118 aaPredicted RBP1.05□□□□□ -2.24
UBR4-217ENST00000497018 TMEM258P61165 79 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 CDK6Q00534 326 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 CATR1Q13166 79 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 KRTAP13-2Q52LG2 175 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 LELP1Q5T871 98 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 LINC01545Q5VT33 79 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 ATP11AUNQ6ZP68 121 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 Q6ZUT4 128 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 SH2D6Q7Z4S9 175 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 SLC35E3Q7Z769 313 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 HMGN2P46Q86SG4 172 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 C8orf59Q8N0T1 100 aaPredicted RBP1.05□□□□□ -2.24
UBR4-217ENST00000497018 ATOH7Q8N100 152 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 OR5AK2Q8NH90 309 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 OTOSQ8NHW6 89 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 LSM10Q969L4 123 aaKnown RBP1.05□□□□□ -2.24
UBR4-217ENST00000497018 SEC11CQ9BY50 192 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 KRTAP9-8Q9BYQ0 159 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 KRTAP4-2Q9BYR5 136 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 RERGLQ9H628 205 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 RPRMQ9NS64 109 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 LY96Q9Y6Y9 160 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 ANK3Q12955 4377 aaKnown RBP1.04□□□□□ -2.24
UBR4-217ENST00000497018 LOC107986453A0A1B0GWG9 222 aa1.04□□□□□ -2.24
UBR4-217ENST00000497018 hDV103S1A0JD37 113 aa1.04□□□□□ -2.24
UBR4-217ENST00000497018 LRCOL1A6NCL2 159 aa1.04□□□□□ -2.24
UBR4-217ENST00000497018 ZNF705FA8MVS1 300 aaPredicted RBP1.04□□□□□ -2.24
UBR4-217ENST00000497018 C17orf112F2Z3M2 114 aa1.04□□□□□ -2.24
UBR4-217ENST00000497018 LYRM1O43325 122 aa1.04□□□□□ -2.24
UBR4-217ENST00000497018 PSCAO43653 123 aa1.04□□□□□ -2.24
UBR4-217ENST00000497018 SNAPC5O75971 98 aa1.04□□□□□ -2.24
UBR4-217ENST00000497018 PMP2P02689 132 aa1.04□□□□□ -2.24
UBR4-217ENST00000497018 HMGA1P17096 107 aaKnown RBP1.04□□□□□ -2.24
UBR4-217ENST00000497018 PCBD1P61457 104 aa1.04□□□□□ -2.24
UBR4-217ENST00000497018 LSM3P62310 102 aaKnown RBP1.04□□□□□ -2.24
UBR4-217ENST00000497018 ZNF846Q147U1 533 aa1.04□□□□□ -2.24
UBR4-217ENST00000497018 TPRXLQ17RH7 258 aa1.04□□□□□ -2.24
UBR4-217ENST00000497018 Q56UQ5 140 aa1.04□□□□□ -2.24
UBR4-217ENST00000497018 MIC13Q5XKP0 118 aa1.04□□□□□ -2.24
UBR4-217ENST00000497018 FOXI2Q6ZQN5 318 aa1.04□□□□□ -2.24
UBR4-217ENST00000497018 KCNRGQ8N5I3 272 aa1.04□□□□□ -2.24
UBR4-217ENST00000497018 OR8B3Q8NGG8 313 aa1.04□□□□□ -2.24
UBR4-217ENST00000497018 SFT2D1Q8WV19 159 aa1.04□□□□□ -2.24
UBR4-217ENST00000497018 LINC00526Q96FQ7 95 aa1.04□□□□□ -2.24
UBR4-217ENST00000497018 Q96M85 177 aa1.04□□□□□ -2.24
UBR4-217ENST00000497018 C14orf132Q9NPU4 83 aa1.04□□□□□ -2.24
UBR4-217ENST00000497018 TPRKBQ9Y3C4 175 aa1.04□□□□□ -2.24
UBR4-217ENST00000497018 CHCHD2Q9Y6H1 151 aaPredicted RBP1.04□□□□□ -2.24
UBR4-217ENST00000497018 SERP1Q9Y6X1 66 aa1.04□□□□□ -2.24
UBR4-217ENST00000497018 HRNRQ86YZ3 2850 aaPredicted RBP1.04□□□□□ -2.24
UBR4-217ENST00000497018 MED12Q93074 2177 aa1.03□□□□□ -2.24
UBR4-217ENST00000497018 DNAJC13O75165 2243 aa1.03□□□□□ -2.24
UBR4-217ENST00000497018 FAT4Q6V0I7 4981 aa1.03□□□□□ -2.24
UBR4-217ENST00000497018 TRAV1-1A0A0B4J248 108 aa1.03□□□□□ -2.24
UBR4-217ENST00000497018 OOSP1A8MZH6 123 aa1.03□□□□□ -2.24
UBR4-217ENST00000497018 G3V3Q6 166 aa1.03□□□□□ -2.24
UBR4-217ENST00000497018 M0R233 179 aa1.03□□□□□ -2.24
UBR4-217ENST00000497018 GEMIN2O14893 280 aaKnown RBP1.03□□□□□ -2.24
UBR4-217ENST00000497018 RTL8CO15255 209 aa1.03□□□□□ -2.24
UBR4-217ENST00000497018 HYPMO75409 117 aa1.03□□□□□ -2.24
UBR4-217ENST00000497018 UBL3O95164 117 aa1.03□□□□□ -2.24
UBR4-217ENST00000497018 CRPP02741 224 aa1.03□□□□□ -2.24
UBR4-217ENST00000497018 ASAH2BP0C7U1 165 aa1.03□□□□□ -2.24
UBR4-217ENST00000497018 MGST1P10620 155 aaKnown RBP1.03□□□□□ -2.24
UBR4-217ENST00000497018 CKS2P33552 79 aa1.03□□□□□ -2.24
UBR4-217ENST00000497018 SSR2P43308 183 aa1.03□□□□□ -2.24
UBR4-217ENST00000497018 TPPP2P59282 170 aa1.03□□□□□ -2.24
UBR4-217ENST00000497018 CIRBPQ14011 172 aaKnown RBP1.03□□□□□ -2.24
UBR4-217ENST00000497018 LY6EQ16553 131 aa1.03□□□□□ -2.24
UBR4-217ENST00000497018 Q6AWC8 147 aa1.03□□□□□ -2.24
UBR4-217ENST00000497018 C5orf17Q8NAS9 161 aa1.03□□□□□ -2.24
UBR4-217ENST00000497018 OR2T35Q8NGX2 323 aa1.03□□□□□ -2.24
UBR4-217ENST00000497018 ATP6V0E2Q8NHE4 81 aa1.03□□□□□ -2.24
UBR4-217ENST00000497018 Q8TAT8 98 aa1.03□□□□□ -2.24
UBR4-217ENST00000497018 RAB37Q96AX2 223 aa1.03□□□□□ -2.24
UBR4-217ENST00000497018 SPANXDQ9BXN6 97 aa1.03□□□□□ -2.24
UBR4-217ENST00000497018 NAA60Q9H7X0 242 aa1.03□□□□□ -2.24
UBR4-217ENST00000497018 CYTL1Q9NRR1 136 aa1.03□□□□□ -2.24
UBR4-217ENST00000497018 TAS2R8Q9NYW2 309 aa1.03□□□□□ -2.24
UBR4-217ENST00000497018 ANKRD36A6QL64 1941 aa1.03□□□□□ -2.25
UBR4-217ENST00000497018 CCDC88CQ9P219 2028 aa1.03□□□□□ -2.25
UBR4-217ENST00000497018 SACSQ9NZJ4 4579 aa1.03□□□□□ -2.25
UBR4-217ENST00000497018 A0A096LNT2 108 aa1.02□□□□□ -2.25
UBR4-217ENST00000497018 TRAV12-1A0A0B4J245 112 aa1.02□□□□□ -2.25
UBR4-217ENST00000497018 IGHV1-24A0A0C4DH33 117 aa1.02□□□□□ -2.25
UBR4-217ENST00000497018 PNMA8CA0A1B0GUJ8 204 aa1.02□□□□□ -2.25
UBR4-217ENST00000497018 A0A1B0GVY2 172 aa1.02□□□□□ -2.25
UBR4-217ENST00000497018 HMSDA8MTL9 139 aa1.02□□□□□ -2.25
UBR4-217ENST00000497018 ZNF736B4DX44 427 aaPredicted RBP1.02□□□□□ -2.25
UBR4-217ENST00000497018 MCRIP1C9JLW8 97 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms