RNA–Protein interactions for RNA: ENST00000496969.1

SF1-219, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-219ENST00000496969 TCAPO15273 167 aa5.45□□□□□ -1.54
SF1-219ENST00000496969 ESDP10768 282 aa5.45□□□□□ -1.54
SF1-219ENST00000496969 RPS10P46783 165 aaKnown RBP5.45□□□□□ -1.54
SF1-219ENST00000496969 SUMO2P61956 95 aaKnown RBP5.45□□□□□ -1.54
SF1-219ENST00000496969 CNBPP62633 177 aaKnown RBP5.45□□□□□ -1.54
SF1-219ENST00000496969 HBBP68871 147 aa5.45□□□□□ -1.54
SF1-219ENST00000496969 SS18Q15532 418 aa5.45□□□□□ -1.54
SF1-219ENST00000496969 GAS8-AS1O95177 125 aa5.44□□□□□ -1.54
SF1-219ENST00000496969 CKS2P33552 79 aa5.44□□□□□ -1.54
SF1-219ENST00000496969 XCL1P47992 114 aa5.44□□□□□ -1.54
SF1-219ENST00000496969 POLR2KP53803 58 aaKnown RBP5.44□□□□□ -1.54
SF1-219ENST00000496969 PNRC1Q12796 327 aaPredicted RBP5.44□□□□□ -1.54
SF1-219ENST00000496969 MRPL51Q4U2R6 128 aaKnown RBP5.44□□□□□ -1.54
SF1-219ENST00000496969 HIGD2BQ4VC39 106 aa5.44□□□□□ -1.54
SF1-219ENST00000496969 FAM104BQ5XKR9 115 aa5.44□□□□□ -1.54
SF1-219ENST00000496969 MRPL54Q6P161 138 aaKnown RBP5.44□□□□□ -1.54
SF1-219ENST00000496969 MRPL52Q86TS9 123 aaKnown RBP5.44□□□□□ -1.54
SF1-219ENST00000496969 PKIGQ9Y2B9 76 aa5.44□□□□□ -1.54
SF1-219ENST00000496969 LINC00959A0A1B0GUT2 108 aa5.43□□□□□ -1.54
SF1-219ENST00000496969 TMEM238LA0A1B0GVL6 79 aa5.43□□□□□ -1.54
SF1-219ENST00000496969 CCL25O15444 150 aa5.43□□□□□ -1.54
SF1-219ENST00000496969 RPL37AP61513 92 aaKnown RBP5.43□□□□□ -1.54
SF1-219ENST00000496969 ZNF664Q8N3J9 261 aa5.43□□□□□ -1.54
SF1-219ENST00000496969 C15orf56Q8N910 161 aa5.43□□□□□ -1.54
SF1-219ENST00000496969 NRACQ8N912 160 aa5.43□□□□□ -1.54
SF1-219ENST00000496969 DPH3Q96FX2 82 aa5.43□□□□□ -1.54
SF1-219ENST00000496969 C20orf78Q9BR46 151 aa5.43□□□□□ -1.54
SF1-219ENST00000496969 GVQW2A0A096LPI5 108 aaPredicted RBP5.42□□□□□ -1.54
SF1-219ENST00000496969 IGHV1-58A0A0C4DH39 117 aa5.42□□□□□ -1.54
SF1-219ENST00000496969 J3QL48 77 aa5.42□□□□□ -1.54
SF1-219ENST00000496969 PPBPP02775 128 aa5.42□□□□□ -1.54
SF1-219ENST00000496969 FOXI1Q12951 378 aa5.42□□□□□ -1.54
SF1-219ENST00000496969 ATP5L2Q7Z4Y8 100 aa5.42□□□□□ -1.54
SF1-219ENST00000496969 CDC42SE2Q9NRR3 84 aa5.42□□□□□ -1.54
SF1-219ENST00000496969 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.42□□□□□ -1.54
SF1-219ENST00000496969 A0A1B0GXF2 115 aa5.41□□□□□ -1.54
SF1-219ENST00000496969 D6R8Y8 96 aa5.41□□□□□ -1.54
SF1-219ENST00000496969 ZNF561-AS1K7EIQ3 104 aa5.41□□□□□ -1.54
SF1-219ENST00000496969 PHOX2AO14813 284 aa5.41□□□□□ -1.54
SF1-219ENST00000496969 TNFRSF6BO95407 300 aa5.41□□□□□ -1.54
SF1-219ENST00000496969 MT-ND4LP03901 98 aa5.41□□□□□ -1.54
SF1-219ENST00000496969 MALP21145 153 aa5.41□□□□□ -1.54
SF1-219ENST00000496969 RPL32P62910 135 aaKnown RBP5.41□□□□□ -1.54
SF1-219ENST00000496969 CD164L2Q6UWJ8 174 aa5.41□□□□□ -1.54
SF1-219ENST00000496969 SDIM1Q6ZPB5 146 aa5.41□□□□□ -1.54
SF1-219ENST00000496969 ANAPC16Q96DE5 110 aa5.41□□□□□ -1.54
SF1-219ENST00000496969 SMIM2Q9BVW6 85 aa5.41□□□□□ -1.54
SF1-219ENST00000496969 UBE2D4Q9Y2X8 147 aa5.41□□□□□ -1.54
SF1-219ENST00000496969 CSDC2Q9Y534 153 aaKnown RBP5.41□□□□□ -1.54
SF1-219ENST00000496969 TRBV24-1A0A075B6N3 115 aa5.4□□□□□ -1.54
SF1-219ENST00000496969 C1orf196B1AJZ1 125 aa5.4□□□□□ -1.54
SF1-219ENST00000496969 ORMDL3Q8N138 153 aa5.4□□□□□ -1.54
SF1-219ENST00000496969 COX7A2LO14548 114 aa5.39□□□□□ -1.55
SF1-219ENST00000496969 APOMO95445 188 aa5.39□□□□□ -1.55
SF1-219ENST00000496969 NPYP01303 97 aa5.39□□□□□ -1.55
SF1-219ENST00000496969 SLPIP03973 132 aa5.39□□□□□ -1.55
SF1-219ENST00000496969 RAB5AP20339 215 aa5.39□□□□□ -1.55
SF1-219ENST00000496969 RNASE13Q5GAN3 156 aaKnown RBP5.39□□□□□ -1.55
SF1-219ENST00000496969 CLLU1Q5K131 121 aa5.39□□□□□ -1.55
SF1-219ENST00000496969 Q6ZUT4 128 aa5.39□□□□□ -1.55
SF1-219ENST00000496969 SPACA4Q8TDM5 124 aa5.39□□□□□ -1.55
SF1-219ENST00000496969 C7orf33Q8WU49 177 aa5.39□□□□□ -1.55
SF1-219ENST00000496969 CARD19Q96LW7 228 aa5.39□□□□□ -1.55
SF1-219ENST00000496969 PRELID3AQ96N28 172 aa5.39□□□□□ -1.55
SF1-219ENST00000496969 TIMM21Q9BVV7 248 aa5.39□□□□□ -1.55
SF1-219ENST00000496969 TRAV13-1A0A0B4J241 112 aa5.38□□□□□ -1.55
SF1-219ENST00000496969 IGKV2-24A0A0C4DH68 120 aa5.38□□□□□ -1.55
SF1-219ENST00000496969 PANO1I0J062 215 aa5.38□□□□□ -1.55
SF1-219ENST00000496969 CHTF8P0CG12 524 aa5.38□□□□□ -1.55
SF1-219ENST00000496969 IFI27P40305 119 aaPredicted RBP5.38□□□□□ -1.55
SF1-219ENST00000496969 COX6A2Q02221 97 aa5.38□□□□□ -1.55
SF1-219ENST00000496969 CIRBPQ14011 172 aaKnown RBP5.38□□□□□ -1.55
SF1-219ENST00000496969 MAJINQ3KP22 176 aa5.38□□□□□ -1.55
SF1-219ENST00000496969 TMEM136Q6ZRR5 245 aa5.38□□□□□ -1.55
SF1-219ENST00000496969 MAP1LC3AQ9H492 121 aa5.38□□□□□ -1.55
SF1-219ENST00000496969 SPANXA1Q9NS26 97 aa5.38□□□□□ -1.55
SF1-219ENST00000496969 LINC00474Q9P2X8 69 aa5.38□□□□□ -1.55
SF1-219ENST00000496969 VPS13BQ7Z7G8 4022 aa5.38□□□□□ -1.55
SF1-219ENST00000496969 A0A087WYN8 130 aa5.37□□□□□ -1.55
SF1-219ENST00000496969 IFITM10A6NMD0 228 aa5.37□□□□□ -1.55
SF1-219ENST00000496969 SYCNQ0VAF6 134 aa5.37□□□□□ -1.55
SF1-219ENST00000496969 UQCC3Q6UW78 93 aa5.37□□□□□ -1.55
SF1-219ENST00000496969 CAMK2N2Q96S95 79 aa5.37□□□□□ -1.55
SF1-219ENST00000496969 LAMTOR2Q9Y2Q5 125 aa5.37□□□□□ -1.55
SF1-219ENST00000496969 A6NJY4 79 aa5.36□□□□□ -1.55
SF1-219ENST00000496969 KRTAP29-1A8MX34 341 aaPredicted RBP5.36□□□□□ -1.55
SF1-219ENST00000496969 RPL39P62891 51 aaKnown RBP5.36□□□□□ -1.55
SF1-219ENST00000496969 MRPS36P82909 103 aaKnown RBP5.36□□□□□ -1.55
SF1-219ENST00000496969 PRSS3P2Q8NHM4 247 aa5.36□□□□□ -1.55
SF1-219ENST00000496969 LINC00526Q96FQ7 95 aa5.36□□□□□ -1.55
SF1-219ENST00000496969 IGLV4-69A0A075B6H9 119 aa5.35□□□□□ -1.55
SF1-219ENST00000496969 A0A096LNI7 61 aa5.35□□□□□ -1.55
SF1-219ENST00000496969 LOC389332A0A1B0GUA5 103 aa5.35□□□□□ -1.55
SF1-219ENST00000496969 OXTP01178 125 aa5.35□□□□□ -1.55
SF1-219ENST00000496969 KRTAP10-4P60372 401 aaPredicted RBP5.35□□□□□ -1.55
SF1-219ENST00000496969 SPAG11BQ08648 103 aa5.35□□□□□ -1.55
SF1-219ENST00000496969 Q6ZN92 141 aa5.35□□□□□ -1.55
SF1-219ENST00000496969 C5orf38Q86SI9 138 aa5.35□□□□□ -1.55
SF1-219ENST00000496969 STPG4Q8N801 248 aa5.35□□□□□ -1.55
SF1-219ENST00000496969 OR10D4PQ8NGN7 298 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms