RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	ANAPC16	Q96DE5	110 aa		4.88	□□□□□ -1.63
NVL-223	ENST00000496393	MAP1LC3B	Q9GZQ8	125 aa		4.88	□□□□□ -1.63
NVL-223	ENST00000496393	GNG13	Q9P2W3	67 aa		4.88	□□□□□ -1.63
NVL-223	ENST00000496393	TRBV24-1	A0A075B6N3	115 aa		4.87	□□□□□ -1.63
NVL-223	ENST00000496393		A0A096LNI7	61 aa		4.87	□□□□□ -1.63
NVL-223	ENST00000496393	IGHV1-24	A0A0C4DH33	117 aa		4.87	□□□□□ -1.63
NVL-223	ENST00000496393	IGKV3OR2-268	A0A0C4DH90	116 aa		4.87	□□□□□ -1.63
NVL-223	ENST00000496393		A0A1B0GV50	99 aa		4.87	□□□□□ -1.63
NVL-223	ENST00000496393	GAGE12H	A6NDE8	117 aa		4.87	□□□□□ -1.63
NVL-223	ENST00000496393	PCP4L1	A6NKN8	68 aa		4.87	□□□□□ -1.63
NVL-223	ENST00000496393	ZNF727	A8MUV8	499 aa		4.87	□□□□□ -1.63
NVL-223	ENST00000496393	S100A2	P29034	98 aa		4.87	□□□□□ -1.63
NVL-223	ENST00000496393	AKR1C3	P42330	323 aa		4.87	□□□□□ -1.63
NVL-223	ENST00000496393	UBE2G1	P62253	170 aa		4.87	□□□□□ -1.63
NVL-223	ENST00000496393	CTAG1A	P78358	180 aa		4.87	□□□□□ -1.63
NVL-223	ENST00000496393	ZNF726P1	Q15940	193 aa		4.87	□□□□□ -1.63
NVL-223	ENST00000496393	IQCJ	Q1A5X6	159 aa		4.87	□□□□□ -1.63
NVL-223	ENST00000496393	TMEM241	Q24JQ0	296 aa		4.87	□□□□□ -1.63
NVL-223	ENST00000496393	ZNF674	Q2M3X9	581 aa		4.87	□□□□□ -1.63
NVL-223	ENST00000496393	TMEM97	Q5BJF2	176 aa		4.87	□□□□□ -1.63
NVL-223	ENST00000496393	SPINK6	Q6UWN8	80 aa		4.87	□□□□□ -1.63
NVL-223	ENST00000496393	ISOC2	Q96AB3	205 aa		4.87	□□□□□ -1.63
NVL-223	ENST00000496393	TRAV8-4	A0A0B4J246	113 aa		4.86	□□□□□ -1.63
NVL-223	ENST00000496393	PPP1R2P9	O14990	202 aa		4.86	□□□□□ -1.63
NVL-223	ENST00000496393		P01737	135 aa		4.86	□□□□□ -1.63
NVL-223	ENST00000496393	MGP	P08493	103 aa		4.86	□□□□□ -1.63
NVL-223	ENST00000496393	CEBPG	P53567	150 aa		4.86	□□□□□ -1.63
NVL-223	ENST00000496393	MEF2B	Q02080	365 aa	Predicted RBP	4.86	□□□□□ -1.63
NVL-223	ENST00000496393	SPANXN1	Q5VSR9	72 aa		4.86	□□□□□ -1.63
NVL-223	ENST00000496393	ZFP30	Q9Y2G7	519 aa		4.86	□□□□□ -1.63
NVL-223	ENST00000496393	PDE6D	O43924	150 aa		4.85	□□□□□ -1.63
NVL-223	ENST00000496393	SMIM17	P0DL12	118 aa		4.85	□□□□□ -1.63
NVL-223	ENST00000496393	COX8C	Q7Z4L0	72 aa		4.85	□□□□□ -1.63
NVL-223	ENST00000496393	FMC1	Q96HJ9	113 aa		4.85	□□□□□ -1.63
NVL-223	ENST00000496393	SMIM7	Q9BQ49	75 aa		4.85	□□□□□ -1.63
NVL-223	ENST00000496393	TMEM243	Q9BU79	118 aa		4.85	□□□□□ -1.63
NVL-223	ENST00000496393	NIT2	Q9NQR4	276 aa		4.85	□□□□□ -1.63
NVL-223	ENST00000496393	MUC2	Q02817	5179 aa		4.84	□□□□□ -1.63
NVL-223	ENST00000496393		H7C1H1	209 aa		4.84	□□□□□ -1.63
NVL-223	ENST00000496393	LTA	P01374	205 aa		4.84	□□□□□ -1.63
NVL-223	ENST00000496393	NDUFA6	P56556	154 aa		4.84	□□□□□ -1.63
NVL-223	ENST00000496393	CST9LP1	Q5W188	147 aa		4.84	□□□□□ -1.63
NVL-223	ENST00000496393	SUMO4	Q6EEV6	95 aa		4.84	□□□□□ -1.63
NVL-223	ENST00000496393	LINC00526	Q96FQ7	95 aa		4.84	□□□□□ -1.63
NVL-223	ENST00000496393	AP1S3	Q96PC3	154 aa		4.84	□□□□□ -1.63
NVL-223	ENST00000496393	IMMP2L	Q96T52	175 aa		4.84	□□□□□ -1.63
NVL-223	ENST00000496393	TRAV9-1	A0A075B6T8	112 aa		4.83	□□□□□ -1.64
NVL-223	ENST00000496393		M0QY20	66 aa		4.83	□□□□□ -1.64
NVL-223	ENST00000496393	UBE2L6	O14933	153 aa		4.83	□□□□□ -1.64
NVL-223	ENST00000496393	SNAI2	O43623	268 aa		4.83	□□□□□ -1.64
NVL-223	ENST00000496393	CXCL1	P09341	107 aa		4.83	□□□□□ -1.64
NVL-223	ENST00000496393	GZMB	P10144	247 aa		4.83	□□□□□ -1.64
NVL-223	ENST00000496393	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.83	□□□□□ -1.64
NVL-223	ENST00000496393	ADIRF	Q15847	76 aa		4.83	□□□□□ -1.64
NVL-223	ENST00000496393	CFAP161	Q6P656	301 aa		4.83	□□□□□ -1.64
NVL-223	ENST00000496393		Q6ZRP5	223 aa		4.83	□□□□□ -1.64
NVL-223	ENST00000496393	TPPP3	Q9BW30	176 aa		4.83	□□□□□ -1.64
NVL-223	ENST00000496393	FAT4	Q6V0I7	4981 aa		4.82	□□□□□ -1.64
NVL-223	ENST00000496393	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.82	□□□□□ -1.64
NVL-223	ENST00000496393		A0A1B0GUV1	79 aa		4.82	□□□□□ -1.64
NVL-223	ENST00000496393	HIST1H2BK	O60814	126 aa		4.82	□□□□□ -1.64
NVL-223	ENST00000496393	HIST1H2BJ	P06899	126 aa		4.82	□□□□□ -1.64
NVL-223	ENST00000496393	TRGC1	P0CF51	173 aa		4.82	□□□□□ -1.64
NVL-223	ENST00000496393	HIST1H2BO	P23527	126 aa		4.82	□□□□□ -1.64
NVL-223	ENST00000496393	HIST1H2BB	P33778	126 aa		4.82	□□□□□ -1.64
NVL-223	ENST00000496393	AMT	P48728	403 aa		4.82	□□□□□ -1.64
NVL-223	ENST00000496393	HIST1H2BD	P58876	126 aa		4.82	□□□□□ -1.64
NVL-223	ENST00000496393	HIST1H2BC	P62807	126 aa		4.82	□□□□□ -1.64
NVL-223	ENST00000496393	RPL23	P62829	140 aa	Known RBP	4.82	□□□□□ -1.64
NVL-223	ENST00000496393	HIST2H2BE	Q16778	126 aa		4.82	□□□□□ -1.64
NVL-223	ENST00000496393	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.82	□□□□□ -1.64
NVL-223	ENST00000496393	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.82	□□□□□ -1.64
NVL-223	ENST00000496393	HIST1H2BH	Q93079	126 aa		4.82	□□□□□ -1.64
NVL-223	ENST00000496393	HIST1H2BN	Q99877	126 aa		4.82	□□□□□ -1.64
NVL-223	ENST00000496393	HIST1H2BM	Q99879	126 aa		4.82	□□□□□ -1.64
NVL-223	ENST00000496393	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.81	□□□□□ -1.64
NVL-223	ENST00000496393	FAM231B	A6NCW3	169 aa		4.81	□□□□□ -1.64
NVL-223	ENST00000496393	GATC	O43716	136 aa	Known RBP	4.81	□□□□□ -1.64
NVL-223	ENST00000496393	PAGE4	O60829	102 aa		4.81	□□□□□ -1.64
NVL-223	ENST00000496393	TRGC2	P03986	189 aa		4.81	□□□□□ -1.64
NVL-223	ENST00000496393	OR5AL1	P0C617	328 aa		4.81	□□□□□ -1.64
NVL-223	ENST00000496393	COX19	Q49B96	90 aa		4.81	□□□□□ -1.64
NVL-223	ENST00000496393	COA6	Q5JTJ3	125 aa	Known RBP	4.81	□□□□□ -1.64
NVL-223	ENST00000496393	HIST3H2BB	Q8N257	126 aa		4.81	□□□□□ -1.64
NVL-223	ENST00000496393	CACNG7	P62955	275 aa		4.8	□□□□□ -1.64
NVL-223	ENST00000496393	COTL1	Q14019	142 aa		4.8	□□□□□ -1.64
NVL-223	ENST00000496393	RNASEK	Q6P5S7	137 aa	Known RBP	4.8	□□□□□ -1.64
NVL-223	ENST00000496393	RASL11A	Q6T310	242 aa		4.8	□□□□□ -1.64
NVL-223	ENST00000496393	PRR26	Q8N8Z3	221 aa		4.8	□□□□□ -1.64
NVL-223	ENST00000496393	CARD19	Q96LW7	228 aa		4.8	□□□□□ -1.64
NVL-223	ENST00000496393	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.79	□□□□□ -1.64
NVL-223	ENST00000496393	TRAV26-2	A0A0B4J265	109 aa		4.79	□□□□□ -1.64
NVL-223	ENST00000496393	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.79	□□□□□ -1.64
NVL-223	ENST00000496393	TSTD3	H0UI37	97 aa		4.79	□□□□□ -1.64
NVL-223	ENST00000496393	XCL1	P47992	114 aa		4.79	□□□□□ -1.64
NVL-223	ENST00000496393	FOXI1	Q12951	378 aa		4.79	□□□□□ -1.64
NVL-223	ENST00000496393	GAGE2B	Q13066	116 aa		4.79	□□□□□ -1.64
NVL-223	ENST00000496393	AMMECR1L	Q6DCA0	310 aa		4.79	□□□□□ -1.64
NVL-223	ENST00000496393	BAGE2	Q86Y30	109 aa		4.79	□□□□□ -1.64
NVL-223	ENST00000496393	OR10D4P	Q8NGN7	298 aa		4.79	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms