RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 CCL20P78556 96 aa8.08□□□□□ -1.12
COL1A1-209ENST00000495677 SS18Q15532 418 aa8.08□□□□□ -1.12
COL1A1-209ENST00000495677 LYZL1Q6UWQ5 148 aa8.08□□□□□ -1.12
COL1A1-209ENST00000495677 SMIM12Q96EX1 92 aa8.08□□□□□ -1.12
COL1A1-209ENST00000495677 BTF3L4Q96K17 158 aa8.08□□□□□ -1.12
COL1A1-209ENST00000495677 CNFNQ9BYD5 112 aa8.08□□□□□ -1.12
COL1A1-209ENST00000495677 APOMO95445 188 aa8.07□□□□□ -1.12
COL1A1-209ENST00000495677 RPL13AP40429 203 aaKnown RBP8.07□□□□□ -1.12
COL1A1-209ENST00000495677 PHF5AQ7RTV0 110 aaKnown RBP8.07□□□□□ -1.12
COL1A1-209ENST00000495677 TSKUQ8WUA8 353 aa8.07□□□□□ -1.12
COL1A1-209ENST00000495677 TMEM101Q96IK0 257 aa8.07□□□□□ -1.12
COL1A1-209ENST00000495677 C2orf48Q96LS8 159 aa8.07□□□□□ -1.12
COL1A1-209ENST00000495677 MANBALQ9NQG1 85 aa8.07□□□□□ -1.12
COL1A1-209ENST00000495677 TRAV1-1A0A0B4J248 108 aa8.06□□□□□ -1.12
COL1A1-209ENST00000495677 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.06□□□□□ -1.12
COL1A1-209ENST00000495677 IFNA1P01562 189 aa8.06□□□□□ -1.12
COL1A1-209ENST00000495677 BCL2P10415 239 aa8.06□□□□□ -1.12
COL1A1-209ENST00000495677 ESDP10768 282 aa8.06□□□□□ -1.12
COL1A1-209ENST00000495677 MEF2BQ02080 365 aaPredicted RBP8.06□□□□□ -1.12
COL1A1-209ENST00000495677 RNF151Q2KHN1 245 aa8.06□□□□□ -1.12
COL1A1-209ENST00000495677 TEX261Q6UWH6 196 aa8.06□□□□□ -1.12
COL1A1-209ENST00000495677 C11orf52Q96A22 123 aa8.06□□□□□ -1.12
COL1A1-209ENST00000495677 CDC42SE2Q9NRR3 84 aa8.06□□□□□ -1.12
COL1A1-209ENST00000495677 SDHAF1A6NFY7 115 aa8.04□□□□□ -1.12
COL1A1-209ENST00000495677 CTRLP40313 264 aa8.04□□□□□ -1.12
COL1A1-209ENST00000495677 MRPL52Q86TS9 123 aaKnown RBP8.04□□□□□ -1.12
COL1A1-209ENST00000495677 CAMK2N2Q96S95 79 aa8.04□□□□□ -1.12
COL1A1-209ENST00000495677 CARHSP1Q9Y2V2 147 aaKnown RBP8.04□□□□□ -1.12
COL1A1-209ENST00000495677 I3L3M4 83 aa8.03□□□□□ -1.12
COL1A1-209ENST00000495677 RPL39LQ96EH5 51 aaKnown RBP8.03□□□□□ -1.12
COL1A1-209ENST00000495677 A0A087WZ39 114 aa8.02□□□□□ -1.13
COL1A1-209ENST00000495677 TRBV6-5A0A0K0K1A5 114 aa8.02□□□□□ -1.13
COL1A1-209ENST00000495677 C1orf196B1AJZ1 125 aa8.02□□□□□ -1.13
COL1A1-209ENST00000495677 MALP21145 153 aa8.02□□□□□ -1.13
COL1A1-209ENST00000495677 UBE2D1P51668 147 aa8.02□□□□□ -1.13
COL1A1-209ENST00000495677 TWIST1Q15672 202 aa8.02□□□□□ -1.13
COL1A1-209ENST00000495677 CENPWQ5EE01 88 aa8.02□□□□□ -1.13
COL1A1-209ENST00000495677 BIN3Q9NQY0 253 aa8.02□□□□□ -1.13
COL1A1-209ENST00000495677 COX7A2LO14548 114 aa8.01□□□□□ -1.13
COL1A1-209ENST00000495677 PMCHP20382 165 aa8.01□□□□□ -1.13
COL1A1-209ENST00000495677 CEBPGP53567 150 aa8.01□□□□□ -1.13
COL1A1-209ENST00000495677 BLOC1S1P78537 153 aa8.01□□□□□ -1.13
COL1A1-209ENST00000495677 RPL18AQ02543 176 aaKnown RBP8.01□□□□□ -1.13
COL1A1-209ENST00000495677 KRTAP11-1Q8IUC1 163 aa8.01□□□□□ -1.13
COL1A1-209ENST00000495677 F8WDY8 70 aa8□□□□□ -1.13
COL1A1-209ENST00000495677 MRAP2Q96G30 205 aa8□□□□□ -1.13
COL1A1-209ENST00000495677 MED9Q9NWA0 146 aa8□□□□□ -1.13
COL1A1-209ENST00000495677 CSDC2Q9Y534 153 aaKnown RBP8□□□□□ -1.13
COL1A1-209ENST00000495677 TLX1NBP0CAT3 122 aa7.99□□□□□ -1.13
COL1A1-209ENST00000495677 NUDT10Q8NFP7 164 aa7.99□□□□□ -1.13
COL1A1-209ENST00000495677 NUDT11Q96G61 164 aa7.99□□□□□ -1.13
COL1A1-209ENST00000495677 IMMP2LQ96T52 175 aa7.99□□□□□ -1.13
COL1A1-209ENST00000495677 OPRPNQ99935 248 aaPredicted RBP7.99□□□□□ -1.13
COL1A1-209ENST00000495677 MRPL35Q9NZE8 188 aaKnown RBP7.99□□□□□ -1.13
COL1A1-209ENST00000495677 RAB19A4D1S5 217 aa7.98□□□□□ -1.13
COL1A1-209ENST00000495677 PDE6DO43924 150 aa7.98□□□□□ -1.13
COL1A1-209ENST00000495677 TSHBP01222 138 aa7.98□□□□□ -1.13
COL1A1-209ENST00000495677 GNG4P50150 75 aa7.98□□□□□ -1.13
COL1A1-209ENST00000495677 POLR2KP53803 58 aaKnown RBP7.98□□□□□ -1.13
COL1A1-209ENST00000495677 SMIM15Q7Z3B0 74 aa7.98□□□□□ -1.13
COL1A1-209ENST00000495677 EIF5A2Q9GZV4 153 aaKnown RBP7.97□□□□□ -1.13
COL1A1-209ENST00000495677 TRBV20OR9-2A0A075B6H5 130 aa7.96□□□□□ -1.14
COL1A1-209ENST00000495677 TRBV27A0A0K0K1C4 114 aa7.96□□□□□ -1.14
COL1A1-209ENST00000495677 TMEM241Q24JQ0 296 aa7.96□□□□□ -1.14
COL1A1-209ENST00000495677 OR10D4PQ8NGN7 298 aa7.96□□□□□ -1.14
COL1A1-209ENST00000495677 RPP21Q9H633 154 aaKnown RBP7.96□□□□□ -1.14
COL1A1-209ENST00000495677 FAM168BA1KXE4 195 aa7.95□□□□□ -1.14
COL1A1-209ENST00000495677 C7orf77A4D0Y5 90 aa7.95□□□□□ -1.14
COL1A1-209ENST00000495677 TAGLN2P37802 199 aaKnown RBP7.95□□□□□ -1.14
COL1A1-209ENST00000495677 FOXA3P55318 350 aaPredicted RBP7.95□□□□□ -1.14
COL1A1-209ENST00000495677 ST20Q9HBF5 79 aa7.95□□□□□ -1.14
COL1A1-209ENST00000495677 SPAG11BQ08648 103 aa7.94□□□□□ -1.14
COL1A1-209ENST00000495677 SMAGPQ0VAQ4 97 aa7.94□□□□□ -1.14
COL1A1-209ENST00000495677 LCE2DQ5TA82 110 aaPredicted RBP7.94□□□□□ -1.14
COL1A1-209ENST00000495677 C5orf38Q86SI9 138 aa7.94□□□□□ -1.14
COL1A1-209ENST00000495677 KRTAP7-1Q8IUC3 87 aa7.94□□□□□ -1.14
COL1A1-209ENST00000495677 TMEM242Q9NWH2 141 aa7.94□□□□□ -1.14
COL1A1-209ENST00000495677 RNASE7Q9H1E1 156 aaKnown RBP7.93□□□□□ -1.14
COL1A1-209ENST00000495677 UBE2D4Q9Y2X8 147 aa7.93□□□□□ -1.14
COL1A1-209ENST00000495677 ZNF861PO60384 105 aa7.92□□□□□ -1.14
COL1A1-209ENST00000495677 TSPAN13O95857 204 aa7.92□□□□□ -1.14
COL1A1-209ENST00000495677 TRAV13-1A0A0B4J241 112 aa7.91□□□□□ -1.14
COL1A1-209ENST00000495677 NDUFA1O15239 70 aa7.91□□□□□ -1.14
COL1A1-209ENST00000495677 FAM19A5Q7Z5A7 132 aaPredicted RBP7.91□□□□□ -1.14
COL1A1-209ENST00000495677 SMIM7Q9BQ49 75 aa7.91□□□□□ -1.14
COL1A1-209ENST00000495677 TIMM21Q9BVV7 248 aa7.91□□□□□ -1.14
COL1A1-209ENST00000495677 MUC17Q685J3 4493 aa7.91□□□□□ -1.14
COL1A1-209ENST00000495677 IGHV3OR16-9A0A0B4J2B5 98 aa7.9□□□□□ -1.14
COL1A1-209ENST00000495677 TMEM250H0YL14 139 aa7.9□□□□□ -1.14
COL1A1-209ENST00000495677 K7EN84 100 aa7.9□□□□□ -1.14
COL1A1-209ENST00000495677 M0QXV9 152 aa7.9□□□□□ -1.14
COL1A1-209ENST00000495677 UBE2BP63146 152 aa7.9□□□□□ -1.14
COL1A1-209ENST00000495677 SMDT1Q9H4I9 107 aa7.9□□□□□ -1.14
COL1A1-209ENST00000495677 VCYO14598 125 aa7.89□□□□□ -1.15
COL1A1-209ENST00000495677 TPRXLQ17RH7 258 aa7.89□□□□□ -1.15
COL1A1-209ENST00000495677 C10orf25Q5T742 122 aa7.89□□□□□ -1.15
COL1A1-209ENST00000495677 C6orf48Q9UBA6 75 aa7.89□□□□□ -1.15
COL1A1-209ENST00000495677 ZNF727A8MUV8 499 aa7.88□□□□□ -1.15
COL1A1-209ENST00000495677 SRP19P09132 144 aaKnown RBP7.88□□□□□ -1.15
COL1A1-209ENST00000495677 RAB14P61106 215 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms