RNA–Protein interactions for RNA: ENST00000495532.1

HLA-DOA-206, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-206ENST00000495532 TYMSOSQ8TAI1 123 aa6.55□□□□□ -1.36
HLA-DOA-206ENST00000495532 TMEM101Q96IK0 257 aa6.55□□□□□ -1.36
HLA-DOA-206ENST00000495532 KRTAP4-1Q9BYQ7 146 aa6.55□□□□□ -1.36
HLA-DOA-206ENST00000495532 MAP1LC3BQ9GZQ8 125 aa6.55□□□□□ -1.36
HLA-DOA-206ENST00000495532 CDC42SE2Q9NRR3 84 aa6.55□□□□□ -1.36
HLA-DOA-206ENST00000495532 SCO2A0A1W2PP80 73 aa6.54□□□□□ -1.36
HLA-DOA-206ENST00000495532 KRTAP9-7A8MTY7 169 aa6.54□□□□□ -1.36
HLA-DOA-206ENST00000495532 M0QXV9 152 aa6.54□□□□□ -1.36
HLA-DOA-206ENST00000495532 SSNA1O43805 119 aa6.54□□□□□ -1.36
HLA-DOA-206ENST00000495532 PFDN1O60925 122 aa6.54□□□□□ -1.36
HLA-DOA-206ENST00000495532 UBE2BP63146 152 aa6.54□□□□□ -1.36
HLA-DOA-206ENST00000495532 RPL39LQ96EH5 51 aaKnown RBP6.54□□□□□ -1.36
HLA-DOA-206ENST00000495532 ALG5Q9Y673 324 aa6.54□□□□□ -1.36
HLA-DOA-206ENST00000495532 G3V3Q6 166 aa6.53□□□□□ -1.36
HLA-DOA-206ENST00000495532 RPL7L1Q6DKI1 246 aaKnown RBP6.53□□□□□ -1.36
HLA-DOA-206ENST00000495532 TCTE3Q8IZS6 198 aa6.53□□□□□ -1.36
HLA-DOA-206ENST00000495532 MRPL35Q9NZE8 188 aaKnown RBP6.53□□□□□ -1.36
HLA-DOA-206ENST00000495532 hCG_2014768A0A024R1R8 64 aa6.52□□□□□ -1.37
HLA-DOA-206ENST00000495532 SDHAF1A6NFY7 115 aa6.52□□□□□ -1.37
HLA-DOA-206ENST00000495532 F2Z2F3 143 aa6.52□□□□□ -1.37
HLA-DOA-206ENST00000495532 PAGE4O60829 102 aa6.52□□□□□ -1.37
HLA-DOA-206ENST00000495532 TLX1NBP0CAT3 122 aa6.52□□□□□ -1.37
HLA-DOA-206ENST00000495532 SPAG11BQ08648 103 aa6.52□□□□□ -1.37
HLA-DOA-206ENST00000495532 LYZL1Q6UWQ5 148 aa6.52□□□□□ -1.37
HLA-DOA-206ENST00000495532 MRPL52Q86TS9 123 aaKnown RBP6.52□□□□□ -1.37
HLA-DOA-206ENST00000495532 AKAP14Q86UN6 197 aa6.52□□□□□ -1.37
HLA-DOA-206ENST00000495532 IMMP2LQ96T52 175 aa6.52□□□□□ -1.37
HLA-DOA-206ENST00000495532 C1orf196B1AJZ1 125 aa6.51□□□□□ -1.37
HLA-DOA-206ENST00000495532 RPS20P60866 119 aaKnown RBP6.51□□□□□ -1.37
HLA-DOA-206ENST00000495532 AKR1C8PQ5T2L2 129 aa6.51□□□□□ -1.37
HLA-DOA-206ENST00000495532 LINC00173Q6ZV60 143 aa6.51□□□□□ -1.37
HLA-DOA-206ENST00000495532 I3L3M4 83 aa6.5□□□□□ -1.37
HLA-DOA-206ENST00000495532 ASB16-AS1Q495Z4 193 aa6.5□□□□□ -1.37
HLA-DOA-206ENST00000495532 GAGE2EQ4V326 116 aa6.5□□□□□ -1.37
HLA-DOA-206ENST00000495532 KRTAP13-2Q52LG2 175 aa6.5□□□□□ -1.37
HLA-DOA-206ENST00000495532 C10orf25Q5T742 122 aa6.5□□□□□ -1.37
HLA-DOA-206ENST00000495532 C5orf38Q86SI9 138 aa6.5□□□□□ -1.37
HLA-DOA-206ENST00000495532 MRAP2Q96G30 205 aa6.5□□□□□ -1.37
HLA-DOA-206ENST00000495532 SMDT1Q9H4I9 107 aa6.5□□□□□ -1.37
HLA-DOA-206ENST00000495532 GAGE2DQ9UEU5 116 aa6.5□□□□□ -1.37
HLA-DOA-206ENST00000495532 TSHBP01222 138 aa6.49□□□□□ -1.37
HLA-DOA-206ENST00000495532 GIPP09681 153 aaPredicted RBP6.49□□□□□ -1.37
HLA-DOA-206ENST00000495532 CTRLP40313 264 aa6.49□□□□□ -1.37
HLA-DOA-206ENST00000495532 LCE2CQ5TA81 110 aa6.49□□□□□ -1.37
HLA-DOA-206ENST00000495532 TMUB2Q71RG4 321 aa6.49□□□□□ -1.37
HLA-DOA-206ENST00000495532 OR10D4PQ8NGN7 298 aa6.49□□□□□ -1.37
HLA-DOA-206ENST00000495532 PPDPFQ9H3Y8 114 aa6.49□□□□□ -1.37
HLA-DOA-206ENST00000495532 C6orf48Q9UBA6 75 aa6.49□□□□□ -1.37
HLA-DOA-206ENST00000495532 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.48□□□□□ -1.37
HLA-DOA-206ENST00000495532 RPL35P42766 123 aaKnown RBP6.48□□□□□ -1.37
HLA-DOA-206ENST00000495532 LINC00304Q8N9R0 145 aa6.48□□□□□ -1.37
HLA-DOA-206ENST00000495532 CNFNQ9BYD5 112 aa6.48□□□□□ -1.37
HLA-DOA-206ENST00000495532 TMEM242Q9NWH2 141 aa6.48□□□□□ -1.37
HLA-DOA-206ENST00000495532 BORCS7-ASMTA0A0B4J1R7 106 aa6.47□□□□□ -1.37
HLA-DOA-206ENST00000495532 F8WDY8 70 aa6.47□□□□□ -1.37
HLA-DOA-206ENST00000495532 NDUFA1O15239 70 aa6.47□□□□□ -1.37
HLA-DOA-206ENST00000495532 PMCHP20382 165 aa6.47□□□□□ -1.37
HLA-DOA-206ENST00000495532 TWIST1Q15672 202 aa6.47□□□□□ -1.37
HLA-DOA-206ENST00000495532 RNASE13Q5GAN3 156 aaKnown RBP6.47□□□□□ -1.37
HLA-DOA-206ENST00000495532 C9orf62Q8N4C0 152 aa6.47□□□□□ -1.37
HLA-DOA-206ENST00000495532 RNASE7Q9H1E1 156 aaKnown RBP6.47□□□□□ -1.37
HLA-DOA-206ENST00000495532 ANAPC11Q9NYG5 84 aa6.47□□□□□ -1.37
HLA-DOA-206ENST00000495532 TRAV13-1A0A0B4J241 112 aa6.46□□□□□ -1.38
HLA-DOA-206ENST00000495532 TRBV6-5A0A0K0K1A5 114 aa6.46□□□□□ -1.38
HLA-DOA-206ENST00000495532 XKRY2A2RUG3 117 aa6.46□□□□□ -1.38
HLA-DOA-206ENST00000495532 NUPR1O60356 82 aa6.46□□□□□ -1.38
HLA-DOA-206ENST00000495532 IFNA1P01562 189 aa6.46□□□□□ -1.38
HLA-DOA-206ENST00000495532 C9orf129Q5T035 196 aaKnown RBP6.46□□□□□ -1.38
HLA-DOA-206ENST00000495532 UNQ6190/PRO20217Q6UXQ8 127 aa6.46□□□□□ -1.38
HLA-DOA-206ENST00000495532 ORAOV1Q8WV07 137 aa6.46□□□□□ -1.38
HLA-DOA-206ENST00000495532 CTDSP1Q9GZU7 261 aa6.46□□□□□ -1.38
HLA-DOA-206ENST00000495532 C7orf77A4D0Y5 90 aa6.45□□□□□ -1.38
HLA-DOA-206ENST00000495532 FOXA3P55318 350 aaPredicted RBP6.45□□□□□ -1.38
HLA-DOA-206ENST00000495532 TMEM241Q24JQ0 296 aa6.45□□□□□ -1.38
HLA-DOA-206ENST00000495532 Q5BKY6 102 aa6.45□□□□□ -1.38
HLA-DOA-206ENST00000495532 CENPWQ5EE01 88 aa6.45□□□□□ -1.38
HLA-DOA-206ENST00000495532 TEX261Q6UWH6 196 aa6.45□□□□□ -1.38
HLA-DOA-206ENST00000495532 HMSDA8MTL9 139 aa6.44□□□□□ -1.38
HLA-DOA-206ENST00000495532 LINC00242Q5T6M2 205 aa6.44□□□□□ -1.38
HLA-DOA-206ENST00000495532 CSDC2Q9Y534 153 aaKnown RBP6.44□□□□□ -1.38
HLA-DOA-206ENST00000495532 A0A1B0GV50 99 aa6.43□□□□□ -1.38
HLA-DOA-206ENST00000495532 RPL28P46779 137 aaKnown RBP6.43□□□□□ -1.38
HLA-DOA-206ENST00000495532 MT1HP80294 61 aa6.43□□□□□ -1.38
HLA-DOA-206ENST00000495532 KRTAP13-3Q3SY46 172 aa6.43□□□□□ -1.38
HLA-DOA-206ENST00000495532 C11orf52Q96A22 123 aa6.43□□□□□ -1.38
HLA-DOA-206ENST00000495532 FAM210AQ96ND0 272 aa6.43□□□□□ -1.38
HLA-DOA-206ENST00000495532 UBE2D4Q9Y2X8 147 aa6.43□□□□□ -1.38
HLA-DOA-206ENST00000495532 LORP23490 312 aaPredicted RBP6.42□□□□□ -1.38
HLA-DOA-206ENST00000495532 POLR2KP53803 58 aaKnown RBP6.42□□□□□ -1.38
HLA-DOA-206ENST00000495532 CTAG1AP78358 180 aa6.42□□□□□ -1.38
HLA-DOA-206ENST00000495532 KRTAP19-2Q3LHN2 52 aa6.42□□□□□ -1.38
HLA-DOA-206ENST00000495532 Q6ZUT4 128 aa6.42□□□□□ -1.38
HLA-DOA-206ENST00000495532 SFT2D1Q8WV19 159 aa6.42□□□□□ -1.38
HLA-DOA-206ENST00000495532 MBD3L1Q8WWY6 194 aa6.42□□□□□ -1.38
HLA-DOA-206ENST00000495532 IGHV3OR16-9A0A0B4J2B5 98 aa6.41□□□□□ -1.38
HLA-DOA-206ENST00000495532 TRBV27A0A0K0K1C4 114 aa6.41□□□□□ -1.38
HLA-DOA-206ENST00000495532 NDUFC2-KCTD14E9PQ53 114 aa6.41□□□□□ -1.38
HLA-DOA-206ENST00000495532 CFC1BP0CG36 223 aa6.41□□□□□ -1.38
HLA-DOA-206ENST00000495532 KCNRGQ8N5I3 272 aa6.41□□□□□ -1.38
HLA-DOA-206ENST00000495532 SMIM12Q96EX1 92 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms