RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 RNF185Q96GF1 192 aa6.14□□□□□ -1.43
MSH5-218ENST00000494646 CHTOPQ9Y3Y2 248 aaKnown RBP6.14□□□□□ -1.43
MSH5-218ENST00000494646 IGHV3-64A0A075B6Q5 118 aa6.13□□□□□ -1.43
MSH5-218ENST00000494646 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.13□□□□□ -1.43
MSH5-218ENST00000494646 SMKR1H3BMG3 65 aa6.13□□□□□ -1.43
MSH5-218ENST00000494646 CHTF8P0CG12 524 aa6.13□□□□□ -1.43
MSH5-218ENST00000494646 RAB4AP20338 218 aa6.13□□□□□ -1.43
MSH5-218ENST00000494646 CNBPP62633 177 aaKnown RBP6.13□□□□□ -1.43
MSH5-218ENST00000494646 AMN1Q8IY45 258 aa6.13□□□□□ -1.43
MSH5-218ENST00000494646 C15orf56Q8N910 161 aa6.13□□□□□ -1.43
MSH5-218ENST00000494646 CHCHD10Q8WYQ3 142 aaPredicted RBP6.13□□□□□ -1.43
MSH5-218ENST00000494646 TMEM191AQ9H0A3 160 aa6.13□□□□□ -1.43
MSH5-218ENST00000494646 ST20Q9HBF5 79 aa6.13□□□□□ -1.43
MSH5-218ENST00000494646 OSTCQ9NRP0 149 aa6.13□□□□□ -1.43
MSH5-218ENST00000494646 TRBV6-5A0A0K0K1A5 114 aa6.12□□□□□ -1.43
MSH5-218ENST00000494646 H7C423 109 aa6.12□□□□□ -1.43
MSH5-218ENST00000494646 TSHBP01222 138 aa6.12□□□□□ -1.43
MSH5-218ENST00000494646 ESDP10768 282 aa6.12□□□□□ -1.43
MSH5-218ENST00000494646 RPS10P46783 165 aaKnown RBP6.12□□□□□ -1.43
MSH5-218ENST00000494646 HNRNPA3P51991 378 aaKnown RBP6.12□□□□□ -1.43
MSH5-218ENST00000494646 POLR2KP53803 58 aaKnown RBP6.12□□□□□ -1.43
MSH5-218ENST00000494646 TMEM241Q24JQ0 296 aa6.12□□□□□ -1.43
MSH5-218ENST00000494646 NUP35Q8NFH5 326 aa6.12□□□□□ -1.43
MSH5-218ENST00000494646 TMEM101Q96IK0 257 aa6.12□□□□□ -1.43
MSH5-218ENST00000494646 BTF3L4Q96K17 158 aa6.12□□□□□ -1.43
MSH5-218ENST00000494646 TMEM242Q9NWH2 141 aa6.12□□□□□ -1.43
MSH5-218ENST00000494646 V9GYV3 84 aa6.12□□□□□ -1.43
MSH5-218ENST00000494646 A0A087WYN8 130 aa6.11□□□□□ -1.43
MSH5-218ENST00000494646 B5MCH6 92 aa6.11□□□□□ -1.43
MSH5-218ENST00000494646 C9JQL5 133 aa6.11□□□□□ -1.43
MSH5-218ENST00000494646 XCL1P47992 114 aa6.11□□□□□ -1.43
MSH5-218ENST00000494646 RPL23P62829 140 aaKnown RBP6.11□□□□□ -1.43
MSH5-218ENST00000494646 SRSF3P84103 164 aaKnown RBP6.11□□□□□ -1.43
MSH5-218ENST00000494646 COX6A2Q02221 97 aa6.11□□□□□ -1.43
MSH5-218ENST00000494646 RIGQ13278 110 aa6.11□□□□□ -1.43
MSH5-218ENST00000494646 OR5A1Q8NGJ0 315 aa6.11□□□□□ -1.43
MSH5-218ENST00000494646 LINC00526Q96FQ7 95 aa6.11□□□□□ -1.43
MSH5-218ENST00000494646 PLA2G2DQ9UNK4 145 aa6.11□□□□□ -1.43
MSH5-218ENST00000494646 LINC00959A0A1B0GUT2 108 aa6.1□□□□□ -1.43
MSH5-218ENST00000494646 F8WDY8 70 aa6.1□□□□□ -1.43
MSH5-218ENST00000494646 CCL25O15444 150 aa6.1□□□□□ -1.43
MSH5-218ENST00000494646 NDUFS6O75380 124 aaKnown RBP6.1□□□□□ -1.43
MSH5-218ENST00000494646 FOXI1Q12951 378 aa6.1□□□□□ -1.43
MSH5-218ENST00000494646 ADIRFQ15847 76 aa6.1□□□□□ -1.43
MSH5-218ENST00000494646 PRSS3P2Q8NHM4 247 aa6.1□□□□□ -1.43
MSH5-218ENST00000494646 ISOC2Q96AB3 205 aa6.1□□□□□ -1.43
MSH5-218ENST00000494646 MRAP2Q96G30 205 aa6.1□□□□□ -1.43
MSH5-218ENST00000494646 CDC42SE2Q9NRR3 84 aa6.1□□□□□ -1.43
MSH5-218ENST00000494646 IGKV2-24A0A0C4DH68 120 aa6.09□□□□□ -1.43
MSH5-218ENST00000494646 C5orf52A6NGY3 159 aa6.09□□□□□ -1.43
MSH5-218ENST00000494646 VCYO14598 125 aa6.09□□□□□ -1.43
MSH5-218ENST00000494646 OXTP01178 125 aa6.09□□□□□ -1.43
MSH5-218ENST00000494646 ZNF25P17030 456 aaPredicted RBP6.09□□□□□ -1.43
MSH5-218ENST00000494646 CIRBPQ14011 172 aaKnown RBP6.09□□□□□ -1.43
MSH5-218ENST00000494646 ZNF664Q8N3J9 261 aa6.09□□□□□ -1.43
MSH5-218ENST00000494646 TRBV27A0A0K0K1C4 114 aa6.08□□□□□ -1.44
MSH5-218ENST00000494646 FCER1GP30273 86 aa6.08□□□□□ -1.44
MSH5-218ENST00000494646 SS18Q15532 418 aa6.08□□□□□ -1.44
MSH5-218ENST00000494646 MRPL51Q4U2R6 128 aaKnown RBP6.08□□□□□ -1.44
MSH5-218ENST00000494646 FAM74A3Q4VXF1 159 aa6.08□□□□□ -1.44
MSH5-218ENST00000494646 RNASE13Q5GAN3 156 aaKnown RBP6.08□□□□□ -1.44
MSH5-218ENST00000494646 SERTAD4-AS1Q5TG53 156 aa6.08□□□□□ -1.44
MSH5-218ENST00000494646 SPACA4Q8TDM5 124 aa6.08□□□□□ -1.44
MSH5-218ENST00000494646 NAT8Q9UHE5 227 aa6.08□□□□□ -1.44
MSH5-218ENST00000494646 NAT8BQ9UHF3 227 aa6.08□□□□□ -1.44
MSH5-218ENST00000494646 GVQW2A0A096LPI5 108 aaPredicted RBP6.07□□□□□ -1.44
MSH5-218ENST00000494646 C7orf77A4D0Y5 90 aa6.07□□□□□ -1.44
MSH5-218ENST00000494646 SUMO2P61956 95 aaKnown RBP6.07□□□□□ -1.44
MSH5-218ENST00000494646 PEA15Q15121 130 aa6.07□□□□□ -1.44
MSH5-218ENST00000494646 LCE2CQ5TA81 110 aa6.07□□□□□ -1.44
MSH5-218ENST00000494646 FAM104BQ5XKR9 115 aa6.07□□□□□ -1.44
MSH5-218ENST00000494646 NRACQ8N912 160 aa6.07□□□□□ -1.44
MSH5-218ENST00000494646 IGHV1-58A0A0C4DH39 117 aa6.06□□□□□ -1.44
MSH5-218ENST00000494646 SMIM27A0A1W2PRY6 76 aa6.06□□□□□ -1.44
MSH5-218ENST00000494646 PHOX2AO14813 284 aa6.06□□□□□ -1.44
MSH5-218ENST00000494646 CKS2P33552 79 aa6.06□□□□□ -1.44
MSH5-218ENST00000494646 MRPL54Q6P161 138 aaKnown RBP6.06□□□□□ -1.44
MSH5-218ENST00000494646 MRPL52Q86TS9 123 aaKnown RBP6.06□□□□□ -1.44
MSH5-218ENST00000494646 STPG4Q8N801 248 aa6.06□□□□□ -1.44
MSH5-218ENST00000494646 PLAC8Q9NZF1 115 aa6.06□□□□□ -1.44
MSH5-218ENST00000494646 A0A096LNI7 61 aa6.05□□□□□ -1.44
MSH5-218ENST00000494646 PPP1R17O96001 155 aa6.05□□□□□ -1.44
MSH5-218ENST00000494646 CD164L2Q6UWJ8 174 aa6.05□□□□□ -1.44
MSH5-218ENST00000494646 KIR2DL4Q99706 377 aa6.05□□□□□ -1.44
MSH5-218ENST00000494646 UBE2D4Q9Y2X8 147 aa6.05□□□□□ -1.44
MSH5-218ENST00000494646 TRAV13-1A0A0B4J241 112 aa6.04□□□□□ -1.44
MSH5-218ENST00000494646 LCE2AQ5TA79 106 aaPredicted RBP6.04□□□□□ -1.44
MSH5-218ENST00000494646 C5orf38Q86SI9 138 aa6.04□□□□□ -1.44
MSH5-218ENST00000494646 LINC00862A6NCI5 91 aa6.03□□□□□ -1.44
MSH5-218ENST00000494646 C1orf196B1AJZ1 125 aa6.03□□□□□ -1.44
MSH5-218ENST00000494646 PPP1R2P9O14990 202 aa6.03□□□□□ -1.44
MSH5-218ENST00000494646 RPL39P62891 51 aaKnown RBP6.03□□□□□ -1.44
MSH5-218ENST00000494646 SYCNQ0VAF6 134 aa6.03□□□□□ -1.44
MSH5-218ENST00000494646 C7orf33Q8WU49 177 aa6.03□□□□□ -1.44
MSH5-218ENST00000494646 CARD19Q96LW7 228 aa6.03□□□□□ -1.44
MSH5-218ENST00000494646 IGLV4-69A0A075B6H9 119 aa6.02□□□□□ -1.45
MSH5-218ENST00000494646 TRBV24-1A0A075B6N3 115 aa6.02□□□□□ -1.45
MSH5-218ENST00000494646 A0A1B0GW15 77 aa6.02□□□□□ -1.45
MSH5-218ENST00000494646 D6R8Y8 96 aa6.02□□□□□ -1.45
MSH5-218ENST00000494646 COX7A2LO14548 114 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms