RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 BATF3Q9NR55 127 aa1.62□□□□□ -2.15
SMC4-224ENST00000494612 COA4Q9NYJ1 87 aa1.62□□□□□ -2.15
SMC4-224ENST00000494612 TRAPPC2LQ9UL33 140 aa1.62□□□□□ -2.15
SMC4-224ENST00000494612 APLNQ9ULZ1 77 aa1.62□□□□□ -2.15
SMC4-224ENST00000494612 VPS13BQ7Z7G8 4022 aa1.62□□□□□ -2.15
SMC4-224ENST00000494612 APOBP04114 4563 aaKnown RBP1.61□□□□□ -2.15
SMC4-224ENST00000494612 LRP1BQ9NZR2 4599 aa1.61□□□□□ -2.15
SMC4-224ENST00000494612 TRAV10A0A0B4J240 114 aa1.61□□□□□ -2.15
SMC4-224ENST00000494612 IGKV1-9A0A0C4DH69 117 aa1.61□□□□□ -2.15
SMC4-224ENST00000494612 LOC107986453A0A1B0GWG9 222 aa1.61□□□□□ -2.15
SMC4-224ENST00000494612 ZNF705FA8MVS1 300 aaPredicted RBP1.61□□□□□ -2.15
SMC4-224ENST00000494612 HMGN1P05114 100 aa1.61□□□□□ -2.15
SMC4-224ENST00000494612 SCTP09683 121 aa1.61□□□□□ -2.15
SMC4-224ENST00000494612 APELAP0DMC3 54 aa1.61□□□□□ -2.15
SMC4-224ENST00000494612 CBLN1P23435 193 aa1.61□□□□□ -2.15
SMC4-224ENST00000494612 ZNF137PP52743 207 aa1.61□□□□□ -2.15
SMC4-224ENST00000494612 FXYD3Q14802 87 aa1.61□□□□□ -2.15
SMC4-224ENST00000494612 CDK5R1Q15078 307 aa1.61□□□□□ -2.15
SMC4-224ENST00000494612 PIGYQ3MUY2 71 aa1.61□□□□□ -2.15
SMC4-224ENST00000494612 TMEM78Q5T7P6 136 aa1.61□□□□□ -2.15
SMC4-224ENST00000494612 Q6ZQT0 140 aa1.61□□□□□ -2.15
SMC4-224ENST00000494612 DHFR2Q86XF0 187 aa1.61□□□□□ -2.15
SMC4-224ENST00000494612 PLEKHB2Q96CS7 222 aa1.61□□□□□ -2.15
SMC4-224ENST00000494612 C8orf4Q9NR00 106 aa1.61□□□□□ -2.15
SMC4-224ENST00000494612 METTL1Q9UBP6 276 aaKnown RBP1.61□□□□□ -2.15
SMC4-224ENST00000494612 EPDR1Q9UM22 224 aa1.61□□□□□ -2.15
SMC4-224ENST00000494612 DNAH5Q8TE73 4624 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 DEFB131BA0A096LNP1 70 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 A0A1W2PRE2 83 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 C7orf71A4D174 169 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 FAM223BA6NKX1 122 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 TMEM212A6NML5 194 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 MCRIP1C9JLW8 97 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 M0R378 163 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 GGCTO75223 188 aaKnown RBP1.6□□□□□ -2.15
SMC4-224ENST00000494612 PRH1P02810 166 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 SAA2P0DJI9 122 aaPredicted RBP1.6□□□□□ -2.15
SMC4-224ENST00000494612 COX4I1P13073 169 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 UBE2BP63146 152 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 RHOGP84095 191 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 ZNF345Q14585 488 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 MORN2Q502X0 79 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 TMEM128Q5BJH2 165 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 TMEM244Q5VVB8 128 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 ZNF833PQ6ZTB9 187 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 FAM223AQ8IWN6 122 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 C10orf126Q8N4M7 172 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 NUP35Q8NFH5 326 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 OR10AC1Q8NH08 325 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 OR4K15Q8NH41 348 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 CANT1Q8WVQ1 401 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 S100A13Q99584 98 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 PRADC1Q9BSG0 188 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 CST9LQ9H4G1 147 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 SAR1AQ9NR31 198 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 LAMTOR3Q9UHA4 124 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 GNG8Q9UK08 70 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 JPT1Q9UK76 154 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 HMCN2Q8NDA2 5059 aa1.6□□□□□ -2.15
SMC4-224ENST00000494612 MYCBP2O75592 4640 aa1.59□□□□□ -2.15
SMC4-224ENST00000494612 TRAV3A0A0B4J244 114 aa1.59□□□□□ -2.15
SMC4-224ENST00000494612 TMEM256-PLSCR3K7ERE1 68 aa1.59□□□□□ -2.15
SMC4-224ENST00000494612 GNGT2O14610 69 aa1.59□□□□□ -2.15
SMC4-224ENST00000494612 GEMIN2O14893 280 aaKnown RBP1.59□□□□□ -2.15
SMC4-224ENST00000494612 YPEL1O60688 119 aa1.59□□□□□ -2.15
SMC4-224ENST00000494612 MRPS14O60783 128 aaKnown RBP1.59□□□□□ -2.15
SMC4-224ENST00000494612 EDF1O60869 148 aaKnown RBP1.59□□□□□ -2.15
SMC4-224ENST00000494612 SULT1C4O75897 302 aa1.59□□□□□ -2.15
SMC4-224ENST00000494612 TRGC2P03986 189 aa1.59□□□□□ -2.15
SMC4-224ENST00000494612 TMBIM6P55061 237 aa1.59□□□□□ -2.15
SMC4-224ENST00000494612 MPV17LQ2QL34 196 aa1.59□□□□□ -2.15
SMC4-224ENST00000494612 RPL39P5Q59GN2 51 aa1.59□□□□□ -2.15
SMC4-224ENST00000494612 Q5VSD8 79 aa1.59□□□□□ -2.15
SMC4-224ENST00000494612 SAMD13Q5VXD3 122 aa1.59□□□□□ -2.15
SMC4-224ENST00000494612 EIF5AL1Q6IS14 154 aaKnown RBP1.59□□□□□ -2.15
SMC4-224ENST00000494612 C7orf65Q6ZTY9 151 aa1.59□□□□□ -2.15
SMC4-224ENST00000494612 OR51A4Q8NGJ6 313 aa1.59□□□□□ -2.15
SMC4-224ENST00000494612 OR5D14Q8NGL3 314 aa1.59□□□□□ -2.15
SMC4-224ENST00000494612 SPACA4Q8TDM5 124 aa1.59□□□□□ -2.15
SMC4-224ENST00000494612 NPCDR1Q9BY65 106 aa1.59□□□□□ -2.15
SMC4-224ENST00000494612 MRPL32Q9BYC8 188 aaKnown RBP1.59□□□□□ -2.15
SMC4-224ENST00000494612 TAF9BQ9HBM6 251 aa1.59□□□□□ -2.15
SMC4-224ENST00000494612 ABRACLQ9P1F3 81 aa1.59□□□□□ -2.15
SMC4-224ENST00000494612 HSPB11Q9Y547 144 aa1.59□□□□□ -2.15
SMC4-224ENST00000494612 RNF213Q63HN8 5207 aa1.59□□□□□ -2.16
SMC4-224ENST00000494612 IGKV3-7A0A075B6H7 116 aa1.58□□□□□ -2.16
SMC4-224ENST00000494612 IBA57-AS1B1ANH7 110 aa1.58□□□□□ -2.16
SMC4-224ENST00000494612 M0R129 80 aa1.58□□□□□ -2.16
SMC4-224ENST00000494612 FAM107AO95990 144 aa1.58□□□□□ -2.16
SMC4-224ENST00000494612 NAPSAO96009 420 aa1.58□□□□□ -2.16
SMC4-224ENST00000494612 DHFRP00374 187 aa1.58□□□□□ -2.16
SMC4-224ENST00000494612 CTSDP07339 412 aaPredicted RBP1.58□□□□□ -2.16
SMC4-224ENST00000494612 MGST1P10620 155 aaKnown RBP1.58□□□□□ -2.16
SMC4-224ENST00000494612 MIFP14174 115 aa1.58□□□□□ -2.16
SMC4-224ENST00000494612 HTN3P15516 51 aa1.58□□□□□ -2.16
SMC4-224ENST00000494612 RNASE4P34096 147 aaKnown RBP1.58□□□□□ -2.16
SMC4-224ENST00000494612 ZNF93P35789 620 aaPredicted RBP1.58□□□□□ -2.16
SMC4-224ENST00000494612 PPP3R1P63098 170 aa1.58□□□□□ -2.16
SMC4-224ENST00000494612 RTL8BQ17RB0 113 aa1.58□□□□□ -2.16
SMC4-224ENST00000494612 SOSTDC1Q6X4U4 206 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms